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检索条件"机构=Graduate Program in Applied Mathematics and Computational Science"
923 条 记 录,以下是611-620 订阅
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Visualizing structure and transitions in high-dimensional biological data (vol 54, pg 781, 2019)
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NATURE BIOTECHNOLOGY 2020年 第1期38卷 108-108页
作者: Moon, Kevin R. van Dijk, David Wang, Zheng Gigante, Scott Burkhardt, Daniel B. Chen, William S. Yim, Kristina van den Elzen, Antonia Hirn, Matthew J. Coifman, Ronald R. Ivanova, Natalia B. Wolf, Guy Krishnaswamy, Smita Department of Mathematics and Statistics Utah State University Logan USA Cardiovascular Research Center section Cardiology Department of Internal Medicine Yale University New Haven USA Department of Computer Science Yale University New Haven USA School of Basic Medicine Qingdao University Qingdao China Yale Stem Cell Center Department of Genetics Yale University New Haven USA Computational Biology and Bioinformatics Program Yale University New Haven USA Department of Genetics Yale University New Haven USA Department of Computational Mathematics Science and Engineering Michigan State University East Lansing USA Department of Mathematics Michigan State University East Lansing USA Applied Mathematics Program Yale University New Haven USA Department of Genetics Center for Molecular Medicine University of Georgia Athens USA Department of Mathematics and Statistics Université de Montréal Montréal Canada Mila—Quebec Artificial Intelligence Institute Montréal Canada
An amendment to this paper has been published and can be accessed via a link at the top of the paper.
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Void distributions reveal structural link between jammed packings and protein cores
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Physical Review E 2019年 第2期99卷 022416-022416页
作者: John D. Treado Zhe Mei Lynne Regan Corey S. O'Hern Department of Mechanical Engineering & Materials Science Yale University New Haven Connecticut 06520 USA Integrated Graduate Program in Physical & Engineering Biology Yale University New Haven Connecticut 06520 USA Department of Chemistry Yale University New Haven Connecticut 06520 USA Department of Molecular Biophysics & Biochemistry Yale University New Haven Connecticut 06520 USA Department of Physics Yale University New Haven Connecticut 06520 USA Department of Applied Physics Yale University New Haven Connecticut 06520 USA Program in Computational Biology and Bioinformatics Yale University New Haven Connecticut 06520 USA
Dense packing of hydrophobic residues in the cores of globular proteins determines their stability. Recently, we have shown that protein cores possess packing fraction ϕ≈0.56, which is the same as dense, random packi... 详细信息
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Hyperuniformity and anti-hyperuniformity in one-dimensional substitution tilings
arXiv
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arXiv 2018年
作者: Oguz, Erdal C. Socolar, Joshua E.S. Steinhardt, Paul J. Torquato, Salvatore School of Mechanical Engineering Sackler Center for Computational Molecular and Materials Science Tel Aviv University Tel Aviv Israel Physics Department Duke University DurhamNC27708 United States Department of Physics Princeton Center for Theoretical Science Princeton University PrincetonNJ08544 United States Center for Cosmology and Particle Physics Department of Physics New York University New YorkNY10003 United States Department of Chemistry Department of Physics Princeton Institute for the Science and Technology of Materials Program in Applied and Computational Mathematics Princeton University PrincetonNJ08540 United States
We consider the scaling properties characterizing the hyperuniformity (or anti-hyperuniformity) of long wavelength fluctuations in a broad class of one-dimensional substitution tilings. We present a simple argument th...
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Analysis of electromagnetic pulses generation from laser coupling with polymer targets: Effect of metal content in target
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Matter and Radiation at Extremes 2020年 第1期5卷 1-7页
作者: Yadong Xia Feng Zhang Hongbo Cai Weimin Zhou Chao Tian Bo Zhang Dongxiao Liu Tao Yi Yilin Xu Feng Wang Tingshuai Li Shaoping Zhu School of Materials and Energy University of Electronic Science and Technology of ChinaChengdu 611731People’s Republic of China Laser Fusion Research Center China Academy of Engineering PhysicsMianyang 621900People’s Republic of China Science and Technology on Plasma Physics Laboratory Laser Fusion Research CenterChina Academy of Engineering PhysicsMianyang 621900People’s Republic of China Institute of Applied Physics and Computational Mathematics Beijing100094People’s Republic of China HEDPS Center for Applied Physics and TechnologyPeking UniversityBeijing 100871People’s Republic of China IFSA Collaborative Innovation Center Shanghai Jiao Tong UniversityShanghai 200240People’s Republic of China Graduate School China Academy of Engineering PhysicsP.O.Box 2101Beijing 100088People’s Republic of China
Powerful lasers interacting with solid targets can generate intense electromagnetic pulses(EMPs).In this study,EMPs produced by a pulsed laser(1 ps,100 J)shooting at CH targets doped with different titanium(Ti)content... 详细信息
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Correlations in interacting electron liquids: Many-body statistics and hyperuniformity
arXiv
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arXiv 2024年
作者: Wang, Haina Samajdar, Rhine Torquato, Salvatore Department of Chemistry Princeton University PrincetonNJ08544 United States Department of Physics Princeton University PrincetonNJ08544 United States Princeton Center for Theoretical Science Princeton University PrincetonNJ08544 United States Princeton Materials Institute Princeton University PrincetonNJ08540 United States Program in Applied and Computational Mathematics PrincetonNJ08544 United States
Disordered hyperuniform many-body systems are exotic states of matter with novel optical, transport, and mechanical properties. These systems are characterized by an anomalous suppression of large-scale density fluctu... 详细信息
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Atomistic Characterization of Impact Bonding in Cold Spray Deposition of Copper
SSRN
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SSRN 2022年
作者: Nikravesh, Y. Latypov, Marat I. Frantziskonis, G. Muralidharan, Krishna Department of Civil and Architectural Engineering and Mechanics University of Arizona TucsonAZ85721 United States Department of Materials Science and Engineering University of Arizona TucsonAZ85721 United States Graduate Interdisciplinary Program in Applied Mathematics University of Arizona TucsonAZ85721 United States Lunar and Planetary Laboratory University of Arizona TucsonAZ85721 United States
Using classical molecular dynamics, we investigate the cold-spray additive manufacturing process involving copper particles impacting a copper substrate. Specifically, we develop fundamental insights into the interpla... 详细信息
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Multigoal-oriented error estimation and mesh adaptivity for fluid-structure interaction
arXiv
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arXiv 2021年
作者: Ahuja, K. Endtmayer, B. Steinbach, M.C. Wick, Thomas Discipline of Computer Science and Engineering Indian Institute of Technology Indore India Leibniz Universität Hannover Institut für Angewandte Mathematik Welfengarten 1 Hannover30167 Germany Leibniz Universität Hannover Germany Université Paris-Saclay ENS Paris-Saclay LMT - Laboratoire de Mécanique et Technologie Gif-sur-Yvette91190 France Johannes Kepler University Linz Doctoral Program on Computational Mathematics Altenbergerstr. 69 LinzA-4040 Austria Austrian Academy of Sciences Johann Radon Institute for Computational and Applied Mathematics Altenbergerstr. 69 LinzA-4040 Austria
In this work, we consider multigoal-oriented error estimation for stationary fluid-structure interaction. The problem is formulated within a variational-monolithic setting using arbitrary Lagrangian-Eulerian coordinat... 详细信息
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Local-order metric for condensed-phase environments
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Physical Review B 2018年 第6期97卷 064105-064105页
作者: Fausto Martelli Hsin-Yu Ko Erdal C. Oğuz Roberto Car Department of Chemistry Princeton University Princeton New Jersey 08544 USA Institut für Theoretische Physik II Heinrich-Heine-Universität D-40225 Düsseldorf Germany Department of Physics Princeton University Princeton New Jersey 08544 USA Princeton Institute for the Science and Technology of Materials Princeton University Princeton New Jersey 08544 USA Program in Applied and Computational Mathematics Princeton University Princeton New Jersey 08544 USA
We introduce a local order metric (LOM) that measures the degree of order in the neighborhood of an atomic or molecular site in a condensed medium. The LOM maximizes the overlap between the spatial distribution of sit... 详细信息
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Method for obtaining upper bounds on photonic band gaps
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Physical Review B 2009年 第15期80卷 155126-155126页
作者: Mikael C. Rechtsman Salvatore Torquato Courant Institute of Mathematical Sciences 251 Mercer Street New York New York 10012 USA Department of Chemistry Princeton University Princeton New Jersey 08544 USA Princeton Center for Theoretical Physics Princeton New Jersey 08544 USA Program in Applied and Computational Mathematics Princeton Institute for the Science and Technology of Materials Princeton New Jersey 08544 USA School of Natural Sciences Institute for Advanced Study Princeton New Jersey 08544 USA
We present a method to calculate upper bounds on the photonic band gaps of two-component photonic crystals. The method involves calculating both upper and lower bounds on the frequency bands for a given structure, and...
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Identifying the minimal sets of distance restraints for FRET-assisted protein structural modeling
arXiv
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arXiv 2024年
作者: Liu, Zhuoyi Grigas, Alex T. Sumner, Jacob Knab, Edward Davis, Caitlin M. O’Hern, Corey S. Department of Mechanical Engineering and Materials Science Yale University New HavenCT06520 United States Integrated Graduate Program in Physical and Engineering Biology Yale University New HavenCT06520 United States Graduate Program in Computational Biology and Bioinformatics Yale University New HavenCT06520 United States Department of Chemistry Yale University New HavenCT06520 United States Department of Physics Yale University New HavenCT06520 United States Department of Applied Physics Yale University New HavenCT06520 United States
Proteins naturally occur in crowded cellular environments and interact with other proteins, nucleic acids, and organelles. Since most previous experimental protein structure determination techniques require that prote... 详细信息
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