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Analysis of Lead (Pb) and Zinc (Zn) Content in Sediments and Faunus ater at Bale Lhoknga Aceh Besar District

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Journal of Physics: Conference Series 2019年第1期1232卷

作者： Rahmi Agustina M. Ali Sarong Fredinan Yulianda Suhendrayatna Rahmadi Lelifajri Graduate School of Mathematics and Applied Sciences Syiah Kuala University Banda Aceh Indonesia 23111 Departement of Biology Faculty of Teacher Training and Education Jabal Ghafur University Sigli Indonesia 24171 Departement of Biology Faculty of Teacher Training and Education Syiah Kuala University Banda Aceh Indonesia 23111 Departement of Water Resources Management Faculty of Fisheries and Marine Sciences Bogor Agricultural University Bogor Indonesia 16680 Department of Chemical Engineering Faculty of Engineering Syiah Kuala University Banda Aceh Indonesia 23111 Department of Chemistry Faculty of Mathematics and Science Post Graduate Program Syiah Kuala University Banda Aceh Indonesia 23111

Faunus ater is a favoritemollusca that is often found on the Bale River. Local people use these snails as food for consumption along with their main food. Bale River itself is located adjacent to the cement factory, used water washing machines distributed to the river is feared to support the presence of lead (Pb) and zinc (Zn) metals in the river. This study aims to analyze the relationship of Pb and Zn content in sediments to the content of Pb and Zn in Faunus ater. Data collection was carried out in Februari until April 2018. The relationship between Pb and Zn content in sediments with Pb and Zn content in the body of Faunus ater was analyzed by correlation analysis. The results of the data analysis showed that the metal content of Pb and Zn in sediment and Faunus aterwere found to vary. The highest Pb content in sediment was found at station 2 in March, amounting to 32.87 mg / kg. while the highest Zn content was found at station 1 in March amounting to 84 mg / kg. The relationship of heavy metals Pb and Zn in sediments to the content of Pb and Zn in the body of Faunus ater showed a negative correlation. The conclusion of this study is that there is no correlation between the content of Pb and Zn heavy metals in sediments on the content of lead Pb and Zn in the body of Faunus ater at the Bale Lhoknga River in Aceh Besar District.

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Author Correction: Rare variant analyses in 51,256 type 2 diabetes cases and 370,487 controls reveal the pathogenicity spectrum of monogenic diabetes genes

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Nature genetics 2025年第4期57卷 1060页

作者： Alicia Huerta-Chagoya Philip Schroeder Ravi Mandla Jiang Li Lowri Morris Maheak Vora Ahmed Alkanaq Dorka Nagy Lukasz Szczerbinski Jesper G S Madsen Silvia Bonàs-Guarch Fanny Mollandin Joanne B Cole Bianca Porneala Kenneth Westerman Josephine H Li Toni I Pollin Jose C Florez Anna L Gloyn David J Carey Inês Cebola Uyenlinh L Mirshahi Alisa K Manning Aaron Leong Miriam Udler Josep M Mercader Programs in Metabolism and Medical & Population Genetics Broad Institute of Harvard and MIT Cambridge MA USA. Center for Genomic Medicine Massachusetts General Hospital Boston MA USA. Diabetes Unit Massachusetts General Hospital Boston MA USA. Graduate Program in Genomics and Computational Biology University of Pennsylvania Philadelphia PA USA. Department of Genomic Health Geisinger Danville PA USA. Section of Genetics and Genomics Department of Metabolism Digestion and Reproduction Imperial College London London UK. National Heart and Lung Institute Faculty of Medicine London UK. Department of Endocrinology Diabetology and Internal Medicine Medical University of Bialystok Bialystok Poland. Clinical Research Centre Medical University of Bialystok Bialystok Poland. Institute of Mathematics and Computer Science University of Southern Denmark Odense Denmark. The Novo Nordisk Foundation Center for Genomic Mechanisms of Disease Broad Institute of MIT and Harvard Cambridge MA USA. Department of Biochemistry and Molecular Biology University of Southern Denmark Odense Denmark. Centre for Genomic Regulation The Barcelona Institute of Science and Technology Barcelona Spain. Centro de Investigación Biomédica en Red de Diabetes y Enfermedades Metabólicas Asociadas Madrid Spain. Department of Metabolism Digestion and Reproduction Imperial College London London UK. Department of Medicine Harvard Medical School Boston MA USA. Division of Endocrinology Boston Children's Hospital Boston MA USA. Department of Biomedical Informatics University of Colorado School of Medicine Aurora CO USA. Division of General Internal Medicine Massachusetts General Hospital Boston MA USA. Department of Medicine Massachusetts General Hospital Boston MA USA. University of Maryland School of Medicine Baltimore MD USA. Endocrine Division Massachusetts General Hospital Boston MA USA. Department of Pediatrics Division of Endocrinology Stanford School of Medicine Stanford

Void distributions reveal structural link between jammed packings and protein cores

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arXiv 2018年

作者： Treado, John D. Mei, Zhe Regan, Lynne O'Hern, Corey S. Department of Mechanical Engineering & Materials Science Yale University New HavenCT06520 United States Integrated Graduate Program in Physical & Engineering Biology Yale University New HavenCT06520 United States Department of Chemistry Yale University New HavenCT06520 United States Department of Molecular Biophysics & Biochemistry Yale University New HavenCT06520 United States Department of Physics Yale University New HavenCT06520 United States Department of Applied Physics Yale University New HavenCT06520 United States Program in Computational Biology and Bioinformatics Yale University New HavenCT06520 United States

Dense packing of hydrophobic residues in the cores of globular proteins determines their stability. Recently, we have shown that protein cores possess packing fraction φ ≈ 0.56, which is the same as dense, random packing of amino acid-shaped particles. In this article, we compare the structural properties of protein cores and jammed packings of amino acid-shaped particles in much greater depth by measuring their local and connected void regions. We find that the distributions of surface Voronoi cell volumes and local porosities obey similar statistics in both systems. We also measure the probability that accessible, connected void regions percolate as a function of the size of a spherical probe particle and show that both systems possess the same critical probe size. By measuring the critical exponent τ that characterizes the size distribution of connected void clusters at the onset of percolation, we show that void percolation in packings of amino acid-shaped particles and protein cores belong to the same universality class, which is different from that for void percolation in jammed sphere packings. We propose that the connected void regions of proteins are a defining feature of proteins and can be used to differentiate experimentally observed proteins from decoy structures that are generated using computational protein design software. This work emphasizes that jammed packings of amino acid-shaped particles can serve as structural and mechanical analogs of protein cores, and could therefore be useful in modeling the response of protein cores to cavity-expanding and -reducing mutations. Copyright © 2018, The Authors. All rights reserved.

关键词： Amino acids

All-sky search for continuous gravitational waves from isolated neutron stars using Advanced LIGO and Advanced Virgo O3 data

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Physical Review D 2022年第10期106卷 102008-102008页

作者： R. Abbott H. Abe F. Acernese K. Ackley N. Adhikari R. X. Adhikari V. K. Adkins V. B. Adya C. Affeldt D. Agarwal M. Agathos K. Agatsuma N. Aggarwal O. D. Aguiar L. Aiello A. Ain P. Ajith T. Akutsu S. Albanesi R. A. Alfaidi A. Allocca P. A. Altin A. Amato C. Anand S. Anand A. Ananyeva S. B. Anderson W. G. Anderson M. Ando T. Andrade N. Andres M. Andrés-Carcasona T. Andrić S. V. Angelova S. Ansoldi J. M. Antelis S. Antier T. Apostolatos E. Z. Appavuravther S. Appert S. K. Apple K. Arai A. Araya M. C. Araya J. S. Areeda M. Arène N. Aritomi N. Arnaud M. Arogeti S. M. Aronson H. Asada Y. Asali G. Ashton Y. Aso M. Assiduo S. Assis de Souza Melo S. M. Aston P. Astone F. Aubin K. AultONeal C. Austin S. Babak F. Badaracco M. K. M. Bader C. Badger S. Bae Y. Bae A. M. Baer S. Bagnasco Y. Bai J. Baird R. Bajpai T. Baka M. Ball G. Ballardin S. W. Ballmer A. Balsamo G. Baltus S. Banagiri B. Banerjee D. Bankar J. C. Barayoga C. Barbieri B. C. Barish D. Barker P. Barneo F. Barone B. Barr L. Barsotti M. Barsuglia D. Barta J. Bartlett M. A. Barton I. Bartos S. Basak R. Bassiri A. Basti M. Bawaj J. C. Bayley M. Bazzan B. R. Becher B. Bécsy V. M. Bedakihale F. Beirnaert M. Bejger I. Belahcene V. Benedetto D. Beniwal M. G. Benjamin T. F. Bennett J. D. Bentley M. BenYaala S. Bera M. Berbel F. Bergamin B. K. Berger S. Bernuzzi D. Bersanetti A. Bertolini J. Betzwieser D. Beveridge R. Bhandare A. V. Bhandari U. Bhardwaj R. Bhatt D. Bhattacharjee S. Bhaumik A. Bianchi I. A. Bilenko G. Billingsley S. Bini R. Birney O. Birnholtz S. Biscans M. Bischi S. Biscoveanu A. Bisht B. Biswas M. Bitossi M.-A. Bizouard J. K. Blackburn C. D. Blair D. G. Blair R. M. Blair F. Bobba N. Bode M. Boër G. Bogaert M. Boldrini G. N. Bolingbroke L. D. Bonavena F. Bondu E. Bonilla R. Bonnand P. Booker B. A. Boom R. Bork V. Boschi N. Bose S. Bose V. Bossilkov V. Boudart Y. Bouffanais A. Bozzi C. Bradaschia P. R. Brady A. Bramley A. Branch M. Branchesi J. E. Brau M. Breschi T. Briant J. H. Briggs A. Brillet M. Brinkmann P. Brockill A. F. Brooks J. Brooks D. D. Brown LIGO Laboratory California Institute of Technology Pasadena California 91125 USA Graduate School of Science Tokyo Institute of Technology Meguro-ku Tokyo 152-8551 Japan Dipartimento di Farmacia Università di Salerno I-84084 Fisciano Salerno Italy INFN Sezione di Napoli Complesso Universitario di Monte S. Angelo I-80126 Napoli Italy OzGrav School of Physics and Astronomy Monash University Clayton 3800 Victoria Australia University of Wisconsin-Milwaukee Milwaukee Wisconsin 53201 USA Louisiana State University Baton Rouge Louisiana 70803 USA OzGrav Australian National University Canberra Australian Capital Territory 0200 Australia Max Planck Institute for Gravitational Physics (Albert Einstein Institute) D-30167 Hannover Germany Leibniz Universität Hannover D-30167 Hannover Germany Inter-University Centre for Astronomy and Astrophysics Pune 411007 India University of Cambridge Cambridge CB2 1TN United Kingdom Theoretisch-Physikalisches Institut Friedrich-Schiller-Universität Jena D-07743 Jena Germany University of Birmingham Birmingham B15 2TT United Kingdom Northwestern University Evanston Illinois 60208 USA Instituto Nacional de Pesquisas Espaciais 12227-010 São José dos Campos São Paulo Brazil Cardiff University Cardiff CF24 3AA United Kingdom INFN Sezione di Pisa I-56127 Pisa Italy International Centre for Theoretical Sciences Tata Institute of Fundamental Research Bengaluru 560089 India Gravitational Wave Science Project National Astronomical Observatory of Japan (NAOJ) Mitaka City Tokyo 181-8588 Japan Advanced Technology Center National Astronomical Observatory of Japan (NAOJ) Mitaka City Tokyo 181-8588 Japan Dipartimento di Fisica Università degli Studi di Torino I-10125 Torino Italy INFN Sezione di Torino I-10125 Torino Italy SUPA University of Glasgow Glasgow G12 8QQ United Kingdom Università di Napoli “Federico II ” Complesso Universitario di Monte S. Angelo I-80126 Napoli Italy Université de Lyon Université Claude Bernard Lyon 1

We present results of an all-sky search for continuous gravitational waves which can be produced by spinning neutron stars with an asymmetry around their rotation axis, using data from the third observing run of the Advanced LIGO and Advanced Virgo detectors. Four different analysis methods are used to search in a gravitational-wave frequency band from 10 to 2048 Hz and a first frequency derivative from −10−8 to 10−9 Hz/s. No statistically significant periodic gravitational-wave signal is observed by any of the four searches. As a result, upper limits on the gravitational-wave strain amplitude h0 are calculated. The best upper limits are obtained in the frequency range of 100 to 200 Hz and they are ∼1.1×10−25 at 95% confidence level. The minimum upper limit of 1.10×10−25 is achieved at a frequency 111.5 Hz. We also place constraints on the rates and abundances of nearby planetary- and asteroid-mass primordial black holes that could give rise to continuous gravitational-wave signals.

关键词： Gravitational wave sources Neutron stars & pulsars Gravitational wave detection

Irregular oscillatory-patterns in the early-time region of coherent phonon generation in silicon

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arXiv 2017年

作者： Watanabe, Yohei Hino, Ken-Ichi Hase, Muneaki Maeshima, Nobuya Doctoral Program in Materials Science Graduate School of Pure and Applied Sciences University of Tsukuba Tsukuba Ibaraki305-8573 Japan Division of Materials Science Faculty of Pure and Applied Sciences University of Tsukuba Tsukuba305-8573 Japan Center for Computational Sciences University of Tsukuba Tsukuba305-8577 Japan Division of Applied Physics Faculty of Pure and Applied Sciences University of Tsukuba Tsukuba305-8573 Japan

Coherent phonon (CP) generation in an undoped Si crystal is theoretically investigated to shed light on unexplored quantum-mechanical effects in the early-time region immediately after the irradiation of ultrashort laser pulse. One examines time signals attributed to an induced charge density of an ionic core, placing the focus on the effects of the Rabi frequency ωocvon the signals;this frequency corresponds to the peak electric-field of the pulse. It is found that at specific ωocv's where the energy of plasmon caused by photoexcited carriers coincides with the longitudinal-optical phonon energy, the energetically resonant interaction between these two modes leads to striking anticrossings, revealing irregular oscillations with anomalously enhanced amplitudes in the observed time signals. Also, the oscillatory pattern is subject to the Rabi flopping of the excited carrier density that is controlled by ωocv. These findings show that the early-time region is enriched with quantum-mechanical effects inherent in the CP generation, though experimental signals are more or less masked by the so-called coherent artifact due to nonlinear optical effects. Copyright © 2017, The Authors. All rights reserved.

关键词： Ultrashort pulses

Publisher Correction: Rare variant analyses in 51,256 type 2 diabetes cases and 370,487 controls reveal the pathogenicity spectrum of monogenic diabetes genes

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Nature genetics 2024年第11期56卷 2576页

Search for gravitational waves from Scorpius X-1 with a hidden Markov model in O3 LIGO data

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Physical Review D 2022年第6期106卷 062002-062002页

Results are presented for a semicoherent search for continuous gravitational waves from the low-mass x-ray binary Scorpius X-1, using a hidden Markov model (HMM) to allow for spin wandering. This search improves on previous HMM-based searches of Laser Interferometer Gravitational-Wave Observatory data by including the orbital period in the search template grid, and by analyzing data from the latest (third) observing run. In the frequency range searched, from 60 to 500 Hz, we find no evidence of gravitational radiation. This is the most sensitive search for Scorpius X-1 using a HMM to date. For the most sensitive subband, starting at 256.06 Hz, we report an upper limit on gravitational wave strain (at 95% confidence) of h095%=6.16×10−26, assuming the orbital inclination angle takes its electromagnetically restricted value ι=44°. The upper limits on gravitational wave strain reported here are on average a factor of ∼3 lower than in the second observing run HMM search. This is the first Scorpius X-1 HMM search with upper limits that reach below the indirect torque-balance limit for certain subbands, assuming ι=44°.

关键词： Gravitational waves Binary stars Neutron stars & pulsars

Polarimetric geometric modeling for mm-VLBI observations of black holes

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arXiv 2023年

作者： Roelofs, Freek Johnson, Michael D. Chael, Andrew Janssen, Michael Wielgus, Maciek Broderick, Avery E. Akiyama, Kazunori Alberdi, Antxon Alef, Walter Algaba, Juan Carlos Anantua, Richard Asada, Keiichi Azulay, Rebecca Bach, Uwe Baczko, Anne-Kathrin Ball, David Baloković, Mislav Barrett, John Bauböck, Michi Benson, Bradford A. Bintley, Dan Blackburn, Lindy Blundell, Raymond Bouman, Katherine L. Bower, Geoffrey C. Boyce, Hope Bremer, Michael Brinkerink, Christiaan D. Brissenden, Roger Britzen, Silke Broguiere, Dominique Bronzwaer, Thomas Bustamante, Sandra Byun, Do-Young Carlstrom, John E. Ceccobello, Chiara Chan, Chi-Kwan Chang, Dominic O. Chatterjee, Koushik Chatterjee, Shami Chen, Ming-Tang Chen, Yongjun Cheng, Xiaopeng Cho, Ilje Christian, Pierre Conroy, Nicholas S. Conway, John E. Cordes, James M. Crawford, Thomas M. Crew, Geoffrey B. Cruz-Osorio, Alejandro Cui, Yuzhu Dahale, Rohan Davelaar, Jordy De Laurentis, Mariafelicia Deane, Roger Dempsey, Jessica Desvignes, Gregory Dexter, Jason Dhruv, Vedant Doeleman, Sheperd S. Dougal, Sean Dzib, Sergio A. Eatough, Ralph P. Emami, Razieh Falcke, Heino Farah, Joseph Fish, Vincent L. Fomalont, Ed Ford, H. Alyson Foschi, Marianna Fraga-Encinas, Raquel Freeman, William T. Friberg, Per Fromm, Christian M. Fuentes, Antonio Galison, Peter Gammie, Charles F. García, Roberto Gentaz, Olivier Georgiev, Boris Goddi, Ciriaco Gold, Roman Gómez-Ruiz, Arturo I. Gómez, José L. Gu, Minfeng Gurwell, Mark Hada, Kazuhiro Haggard, Daryl Haworth, Kari Hecht, Michael H. Hesper, Ronald Heumann, Dirk Ho, Luis C. Ho, Paul Honma, Mareki Huang, Chih-Wei L. Huang, Lei Hughes, David H. Ikeda, Shiro Impellizzeri, C.M. Violette Inoue, Makoto Issaoun, Sara James, David J. Jannuzi, Buell T. Jeter, Britton Jiang, Wu Jiménez-Rosales, Alejandra Jorstad, Svetlana Joshi, Abhishek V. Jung, Taehyun Karami, Mansour Karuppusamy, Ramesh Kawashima, Tomohisa Keating, Garrett K. Kettenis, Mark Kim, Dong-Jin Kim, Jae-Young Kim, Jongsoo Kim, Junhan Kino, Motoki Koay, Jun Yi Kocherlakota, Prashant Kofuji, Yutaro Koch, Center for Astrophysics Harvard & Smithsonian 60 Garden Street CambridgeMA02138 United States Black Hole Initiative Harvard University 20 Garden Street CambridgeMA02138 United States Radboud University P.O. Box 9010 Nijmegen6500 GL Netherlands Black Hole Initiative Harvard University 20 Garden Street CambridgeMA02138 United States Princeton Gravity Initiative Princeton University Jadwin Hall PrincetonNJ08544 United States Max-Planck-Institut für Radioastronomie Auf dem Hügel 69 BonnD-53121 Germany Perimeter Institute for Theoretical Physics 31 Caroline Street North WaterlooONN2L 2Y5 Canada Department of Physics and Astronomy University of Waterloo 200 University Avenue West WaterlooONN2L 3G1 Canada Waterloo Centre for Astrophysics University of Waterloo WaterlooONN2L 3G1 Canada Massachusetts Institute of Technology Haystack Observatory 99 Millstone Road WestfordMA01886 United States National Astronomical Observatory of Japan 2-21-1 Osawa Mitaka Tokyo181-8588 Japan Instituto de Astrofísica de Andalucía-CSIC Glorieta de la Astronomía s/n GranadaE-18008 Spain Department of Physics Faculty of Science Universiti Malaya Kuala Lumpur50603 Malaysia Department of Physics & Astronomy The University of Texas at San Antonio One UTSA Circle San AntonioTX78249 United States Institute of Astronomy and Astrophysics Academia Sinica 11F of Astronomy-Mathematics Building AS/NTU No. 1 Sec. 4 Roosevelt Rd. Taipei10617 Taiwan Departament d’Astronomia i Astrofísica Universitat de València C. Dr. Moliner 50 València BurjassotE-46100 Spain Observatori Astronòmic Universitat de València C. Catedrático José Beltrán 2 València PaternaE-46980 Spain Department of Space Earth and Environment Chalmers University of Technology Onsala Space Observatory OnsalaSE-43992 Sweden Steward Observatory Department of Astronomy University of Arizona 933 N. Cherry Ave. TucsonAZ85721 United States Yale Center for Astronomy & Astrophysics Yale Universit

The Event Horizon Telescope (EHT) is a millimeter very-long-baseline interferometry (VLBI) array which has imaged the apparent shadows of the supermassive black holes M87∗ and Sagittarius A∗. Polarimetric data from these observations contain a wealth of information on the black hole and accretion flow properties. In this work, we develop polarimetric geometric modeling methods for mm-VLBI data, focusing on approaches that fit data products with differing degrees of invariance to broad classes of calibration errors. We establish a fitting procedure using a polarimetric "m-ring" model to approximate the image structure near a black hole. By fitting this model to synthetic EHT data from general relativistic magnetohydrodynamic (GRMHD) models, we show that the linear and circular polarization structure can be successfully approximated with relatively few model parameters. We then fit this model to EHT observations of M87∗ taken in 2017. In total intensity and linear polarization, the m-ring fits are consistent with previous results from imaging methods. In circular polarization, the m-ring fits indicate the presence of event-horizon-scale circular polarization structure, with a persistent dipolar asymmetry and orientation across several days. The same structure was recovered independently of observing band, used data products, and model assumptions. Despite this broad agreement, imaging methods do not produce similarly consistent results. Our circular polarization results, which imposed additional assumptions on the source structure, should thus be interpreted with some caution. Polarimetric geometric modeling provides a useful and powerful method to constrain the properties of horizon-scale polarized emission, particularly for sparse arrays like the EHT. © 2023, CC BY.

关键词： Polarimeters

Optimal Learning for Sequential Decision Making for Expensive Cost Functions with Stochastic Binary Feedbacks

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arXiv 2017年

作者： Wang, Yingfei Wang, Chu Powell, Warren Department of Computer Science Princeton University PrincetonNJ08540 United States Program in Applied and Computational Mathematics Princeton University PrincetonNJ08544 United States Department of Operations Research and Financial Engineering Princeton University PrincetonNJ08544 United States

We consider the problem of sequentially making decisions that are rewarded by "successes" and "failures" which can be predicted through an unknown relationship that depends on a partially controllable vector of attributes for each instance. The learner takes an active role in selecting samples from the instance pool. The goal is to maximize the probability of success in either offline (training) or online (testing) phases. Our problem is motivated by real-world applications where observations are time consuming and/or expensive. We develop a knowledge gradient policy using an online Bayesian linear classifier to guide the experiment by maximizing the expected value of information of labeling each alternative. We provide a finite-time analysis of the estimated error and show that the maximum likelihood estimator based produced by the KG policy is consistent and asymptotically normal. We also show that the knowledge gradient policy is asymptotically optimal in an offline setting. This work further extends the knowledge gradient to the setting of contextual bandits. We report the results of a series of experiments that demonstrate its efficiency. Copyright © 2017, The Authors. All rights reserved.

关键词： Maximum likelihood estimation