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BPS2025 - Illuminating the dynamic kinome in living cells with KARkey

Biophysical Journal 2025年第3期124卷 502a-502a页

作者： Anne C. Lyons Tomer M. Yaron-Barir Zhou Yuan Qian-yi Zhang Daniel Stehle Dean Boecher Jared Johnson Lewis C. Cantley Danielle Schmitt Sohum Mehta Yingxiao Wang Jin Zhang Department of Pharmacology University of California San Diego La Jolla CA USA Shu Chien-Gene Lay Department of Bioengineering University of California San Diego La Jolla CA USA Vagelos College of Physicians and Surgeons Columbia University New York NY USA Alfred E. Mann Department of Biomedical Engineering University of Southern California Los Angeles CA USA Biomedical Sciences Graduate Program University of California San Diego La Jolla CA USA Meyer Cancer Center Weill Cornell Medicine New York NY USA Department of Cell Biology Harvard Medical School Boston MA USA Department of Chemistry and Biochemistry University of California Los Angeles La Jolla CA USA Department of Chemistry and Biochemistry University of California San Diego La Jolla CA USA

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The molecular epidemiology of multiple zoonotic origins of SARS-CoV-2

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四川生理科学杂志 2022年第7期44卷 1299-1299页

作者： Jonathan E Pekar Bioinformatics and Systems Biology Graduate Program University of California San Diego La Jolla CA 92093 USA Department of Biomedical Informatics University of California San Diego La Jolla CA 92093 USA Department of Human Genetics David Geffen School of Medicine University of California Los Angeles Los Angeles CA 90095 USA Department of Immunology and Microbiology The Scripps Research Institute La Jolla CA 92037 USA Department of Computer Science and Engineering University of California San Diego La Jolla CA 92093 USA Department of Mathematics University of California San Diego La Jolla CA 92093 USA Department of Ecology and Evolutionary Biology University of Arizona Tucson AZ 85721 USA W. Harry Feinstone Department of Molecular Microbiology and Immunology Johns Hopkins Bloomberg School of Public Health Baltimore MD 21205 USA New York City Public Health Laboratory New York City Department of Health and Mental Hygiene New York NY 11101 USA Department of Microbiology Institute for Viral Diseases Biosafety Center College of Medicine Korea University Seoul South Korea BK21 Graduate Program Department of Biomedical Sciences Korea University College of Medicine Seoul 02841 Republic of Korea National Public Health Laboratory National Centre for Infectious Diseases Singapore Malaysia Genome and Vaccine Institute Jalan Bangi 43000 Kajang Selangor Malaysia Department of Medicine University of California San Diego La Jolla CA 92093 USA Department of Microbiology and Immunology School of Medicine Tulane University New Orleans LA 70112 USA Zalgen Labs Frederick MD 21703 USA Global Virus Network (GVN) Baltimore MD 21201 USA Sydney Institute for Infectious Diseases School of Life and Environmental Sciences and School of Medical Sciences The University of Sydney Sydney NSW 2006 Australia Institute of Evolutionary Biology University of Edinburgh King’s Buildings Edinburgh EH9 3FL UK Department of Biomathematics David Geffen School of Medicine Un

Understanding the circumstances that lead to pandemics is important for their prevention. Here, we analyze the genomic diversity of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) early in the coronavirus disease 2019 (COVID-19) pandemic. We show that SARS-CoV-2 genomic diversity before February 2020 likely comprised only two distinct viral lineages, denoted A and B. Phylodynamic rooting methods, coupled with epidemic simulations, reveal that these lineages were the result of at least two separate cross-species transmission events into humans. The first zoonotic transmission likely involved lineage B viruses around 18 November 2019 (23 October-8 December), while the separate introduction of lineage A likely occurred within weeks of this event.

关键词： epidemiology likely acute

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Assessing Trustworthy AI in Times of COVID-19: Deep Learning for Predicting a Multiregional Score Conveying the Degree of Lung Compromise in COVID-19 Patients

IEEE Transactions on Technology and Society

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IEEE Transactions on Technology and Society 2022年第4期3卷 272-289页

作者： Allahabadi, Himanshi Amann, Julia Balot, Isabelle Beretta, Andrea Binkley, Charles Bozenhard, Jonas Bruneault, Frederick Brusseau, James Candemir, Sema Cappellini, Luca Alessandro Chakraborty, Subrata Cherciu, Nicoleta Cociancig, Christina Coffee, Megan Ek, Irene Espinosa-Leal, Leonardo Farina, Davide Fieux-Castagnet, Genevieve Frauenfelder, Thomas Gallucci, Alessio Giuliani, Guya Golda, Adam Van Halem, Irmhild Hildt, Elisabeth Holm, Sune Kararigas, Georgios Krier, Sebastien A. Kuhne, Ulrich Lizzi, Francesca Madai, Vince I. Markus, Aniek F. Masis, Serg Mathez, Emilie Wiinblad Mureddu, Francesco Neri, Emanuele Osika, Walter Ozols, Matiss Panigutti, Cecilia Parent, Brendan Pratesi, Francesca Moreno-Sanchez, Pedro A. Sartor, Giovanni Savardi, Mattia Signoroni, Alberto Sormunen, Hanna-Maria Spezzatti, Andy Srivastava, Adarsh Stephansen, Annette F. Theng, Lau Bee Tithi, Jesmin Jahan Tuominen, Jarno Umbrello, Steven Vaccher, Filippo Vetter, Dennis Westerlund, Magnus Wurth, Renee Zicari, Roberto V. Ey Netherlands Enterprise Intelligence Department Amsterdam1083 HP Netherlands Eth Zurich Health Ethics and Policy Lab Department of Health Sciences and Technology Zürich8092 Switzerland Center for Diplomatic and Strategic Studies Postgraduate Studies in Diplomacy and International Relations Paris75015 France Pisa56124 Italy Hackensack Meridian Health Bioethics Center EdisonNJ08820 United States University of Oxford Faculty of Philosophy OxfordOX2 6GG United Kingdom Collège André- Laurendeau Philosophie Department MontrealQCH8N 2J4 Canada Université du Québec À Montréal École des Médias MontrealQCH2L 2C4 Canada Pace University Philosophy Department New YorkNY10038 United States The Ohio State University Wexner Medical Center Department of Radiology ColumbusOH43210 United States Humanitas Research Hospital Department of Radiology Milan20089 Italy Humanitas University Department of Biomedical Sciences Milan20089 Italy University of New England Faculty of Science Agriculture Business and Law ArmidaleNSW2351 Australia University of Technology Sydney Faculty of Engineering and Information Technology SydneyNSW2007 Australia Scuola Superiore Sant'Anna European Centre of Excellence on the Regulation of Robotics and Ai Pisa56127 Italy University of Bremen Group of Computer Architecture Bremen28359 Germany New York University Grossman School of Medicine Division of Infectious Diseases and Immunology Department of Medicine New YorkNY10016 United States Digital Institute Ai Research Section Stockholm16731 Sweden Arcada University of Applied Sciences Department of Business Management and Analytics Helsinki00550 Finland University of Brescia Radiological Sciences and Public Health Department of Medical and Surgical Specialties Brescia25121 Italy Sncf Reseau Sa Ethique Groupe La Plaine93418 France Institute of Diagnostic and Interventional Radiology University Hospital Zurich Zürich8091 Switzerland Eindhoven University of Tech

This article's main contributions are twofold: 1) to demonstrate how to apply the general European Union's High-Level Expert Group's (EU HLEG) guidelines for trustworthy AI in practice for the domain of healthcare and 2) to investigate the research question of what does 'trustworthy AI' mean at the time of the COVID-19 pandemic. To this end, we present the results of a post-hoc self-assessment to evaluate the trustworthiness of an AI system for predicting a multiregional score conveying the degree of lung compromise in COVID-19 patients, developed and verified by an interdisciplinary team with members from academia, public hospitals, and industry in time of pandemic. The AI system aims to help radiologists to estimate and communicate the severity of damage in a patient's lung from Chest X-rays. It has been experimentally deployed in the radiology department of the ASST Spedali Civili clinic in Brescia, Italy, since December 2020 during pandemic time. The methodology we have applied for our post-hoc assessment, called Z-Inspection®, uses sociotechnical scenarios to identify ethical, technical, and domain-specific issues in the use of the AI system in the context of the pandemic. © 2020 IEEE.

关键词： COVID-19

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The Multi-modality Cell Segmentation Challenge: Towards Universal Solutions

arXiv

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arXiv 2023年

作者： Ma, Jun Xie, Ronald Ayyadhury, Shamini Ge, Cheng Gupta, Anubha Gupta, Ritu Gu, Song Zhang, Yao Lee, Gihun Kim, Joonkee Lou, Wei Li, Haofeng Upschulte, Eric Dickscheid, Timo de Almeida, José Guilherme Wang, Yixin Han, Lin Yang, Xin Labagnara, Marco Gligorovski, Vojislav Scheder, Maxime Rahi, Sahand Jamal Kempster, Carly Pollitt, Alice Espinosa, Leon Mignot, Tâm Middeke, Jan Moritz Eckardt, Jan-Niklas Li, Wangkai Li, Zhaoyang Cai, Xiaochen Bai, Bizhe Greenwald, Noah F. Van Valen, David Weisbart, Erin Cimini, Beth A. Cheung, Trevor Brück, Oscar Bader, Gary D. Wang, Bo Peter Munk Cardiac Centre University Health Network TorontoON Canada Department of Laboratory Medicine and Pathobiology University of Toronto TorontoON Canada Vector Institute TorontoON Canada Department of Molecular Genetics University of Toronto TorontoON Canada Donnelly Centre University of Toronto TorontoON Canada Princess Margaret Cancer Centre University Health Network TorontoON Canada School of Medicine and Pharmacy Ocean University of China Qingdao China New Delhi India Laboratory Oncology Dr. BRA-IRCH All India Institute of Medical Sciences New Delhi India Department of Image Reconstruction Nanjing Anke Medical Technology Co. Ltd. Nanjing China Shanghai Artificial Intelligence Laboratory Shanghai China Graduate School of AI KAIST Seoul Korea Republic of Shenzhen Research Institute of Big Data Shenzhen China Shenzhen China Helmholtz AI Research Center Jülich Jülich Germany Faculty of Mathematics and Natural Sciences Institute of Computer Science Heinrich Heine University Düsseldorf Düsseldorf Germany Hinxton United Kingdom Champalimaud Foundation - Centre for the Unknown Lisbon Portugal Department of Bioengineering Stanford University Palo AltoCA United States Tandon School of Engineering New York University New YorkNY United States School of Biomedical Engineering Health Science Center Shenzhen University Shenzhen China Lausanne Switzerland School of Biological Sciences University of Reading Reading United Kingdom Laboratoire de Chimie Bactérienne CNRS Université Aix Marseille UMR Institut de Microbiologie de la Méditerranée Marseille France Department of Internal Medicine I University Hospital Dresden Technical University Dresden Dresden Germany Else Kroener Fresenius Center for Digital Health Technical University Dresden Dresden Germany Department of Automation University of Science and Technology of China Hefei China Institute of Advanced Technology University of Science and Technology of China Hefei Chi

Cell segmentation is a critical step for quantitative single-cell analysis in microscopy images. Existing cell segmentation methods are often tailored to specific modalities or require manual interventions to specify hyper-parameters in different experimental settings. Here, we present a multi-modality cell segmentation benchmark, comprising over 1500 labeled images derived from more than 50 diverse biological experiments. The top participants developed a Transformer-based deep-learning algorithm that not only exceeds existing methods but can also be applied to diverse microscopy images across imaging platforms and tissue types without manual parameter adjustments. This benchmark and the improved algorithm offer promising avenues for more accurate and versatile cell analysis in microscopy imaging. © 2023, CC BY-NC-ND.

关键词： Deep learning

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Identified charged-hadron production in p+Al, He3+Au, and Cu+Au collisions at sNN=200GeV and in U+U collisions at sNN=193GeV

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Physical Review C 2024年第5期109卷 054910-054910页

作者： N. J. Abdulameer U. Acharya A. Adare C. Aidala N. N. Ajitanand Y. Akiba R. Akimoto J. Alexander M. Alfred V. Andrieux K. Aoki N. Apadula H. Asano E. T. Atomssa T. C. Awes B. Azmoun V. Babintsev M. Bai X. Bai N. S. Bandara B. Bannier K. N. Barish S. Bathe V. Baublis C. Baumann S. Baumgart A. Bazilevsky M. Beaumier S. Beckman R. Belmont A. Berdnikov Y. Berdnikov L. Bichon D. Black B. Blankenship D. S. Blau J. S. Bok V. Borisov K. Boyle M. L. Brooks J. Bryslawskyj H. Buesching V. Bumazhnov S. Butsyk S. Campbell V. Canoa Roman R. Cervantes C.-H. Chen D. Chen M. Chiu C. Y. Chi I. J. Choi J. B. Choi S. Choi P. Christiansen T. Chujo V. Cianciolo Z. Citron B. A. Cole M. Connors R. Corliss Y. Corrales Morales N. Cronin N. Crossette M. Csanád T. Csörgő L. D'Orazio T. W. Danley A. Datta M. S. Daugherity G. David C. T. Dean K. DeBlasio K. Dehmelt A. Denisov A. Deshpande E. J. Desmond L. Ding A. Dion P. B. Diss D. Dixit V. Doomra J. H. Do O. Drapier A. Drees K. A. Drees J. M. Durham A. Durum H. En'yo T. Engelmore A. Enokizono R. Esha K. O. Eyser B. Fadem W. Fan N. Feege D. E. Fields M. Finger, Jr. M. Finger D. Firak D. Fitzgerald F. Fleuret S. L. Fokin J. E. Frantz A. Franz A. D. Frawley Y. Fukao Y. Fukuda T. Fusayasu K. Gainey P. Gallus C. Gal P. Garg A. Garishvili I. Garishvili H. Ge M. Giles F. Giordano A. Glenn X. Gong M. Gonin Y. Goto R. Granier de Cassagnac N. Grau S. V. Greene M. Grosse Perdekamp Y. Gu T. Gunji T. Guo H. Guragain T. Hachiya J. S. Haggerty K. I. Hahn H. Hamagaki H. F. Hamilton J. Hanks S. Y. Han M. Harvey S. Hasegawa T. O. S. Haseler K. Hashimoto R. Hayano T. K. Hemmick T. Hester X. He J. C. Hill K. Hill A. Hodges R. S. Hollis K. Homma B. Hong T. Hoshino N. Hotvedt J. Huang T. Ichihara Y. Ikeda K. Imai Y. Imazu M. Inaba A. Iordanova D. Isenhower A. Isinhue D. Ivanishchev B. V. Jacak S. J. Jeon M. Jezghani X. Jiang Z. Ji B. M. Johnson K. S. Joo D. Jouan D. S. Jumper J. Kamin S. Kanda B. H. Kang J. H. Kang J. S. Kang D. Kapukchyan J. Kapustinsky S. Karthas D. Kawall A. V. Kazantsev J. A. Key V. Khachatrya Debrecen University H-4010 Debrecen Egyetem tér 1 Hungary Georgia State University Atlanta Georgia 30303 USA University of Colorado Boulder Colorado 80309 USA Los Alamos National Laboratory Los Alamos New Mexico 87545 USA Department of Physics University of Michigan Ann Arbor Michigan 48109 USA Chemistry Department State University of New York at Stony Brook Stony Brook New York 11794 USA RIKEN Nishina Center for Accelerator-Based Science Wako Saitama 351-0198 Japan RIKEN BNL Research Center Brookhaven National Laboratory Upton New York 11973 USA Center for Nuclear Study Graduate School of Science University of Tokyo 7-3-1 Hongo Bunkyo Tokyo 113-0033 Japan Department of Physics and Astronomy Howard University Washington DC 20059 USA KEK High Energy Accelerator Research Organization Tsukuba Ibaraki 305-0801 Japan Iowa State University Ames Iowa 50011 USA Department of Physics and Astronomy State University of New York at Stony Brook Stony Brook New York 11794 USA Kyoto University Kyoto 606-8502 Japan Oak Ridge National Laboratory Oak Ridge Tennessee 37831 USA Physics Department Brookhaven National Laboratory Upton New York 11973 USA IHEP Protvino State Research Center of Russian Federation Institute for High Energy Physics Protvino 142281 Russia Collider-Accelerator Department Brookhaven National Laboratory Upton New York 11973 USA Science and Technology on Nuclear Data Laboratory China Institute of Atomic Energy Beijing 102413 People's Republic of China Department of Physics University of Massachusetts Amherst Massachusetts 01003 USA University of California-Riverside Riverside California 92521 USA Baruch College City University of New York New York New York 10010 USA Petersburg Nuclear Physics Institute Gatchina Leningrad Region 188300 Russia Physics and Astronomy Department University of North Carolina at Greensboro Greensboro North Carolina 27412 USA Vanderbilt University Nashville Tennessee 37235 USA Saint Petersburg Stat

The PHENIX experiment has performed a systematic study of identified charged-hadron (π±, K±, p, p¯) production at midrapidity in p+Al, He3+Au, and Cu+Au collisions at sNN=200GeV and U+U collisions at sNN=193GeV. Identified charged-hadron invariant transverse-momentum (pT) and transverse-mass (mT) spectra are presented and interpreted in terms of radially expanding thermalized systems. The particle ratios of K/π and p/π have been measured in different centrality ranges of large (Cu+Au and U+U) and small (p+Al and He3+Au) collision systems. The values of K/π ratios measured in all considered collision systems were found to be consistent with those measured in p+p collisions. However, the values of p/π ratios measured in large collision systems reach the values of ≈0.6, which is a factor of ≈2 larger than in p+p collisions. These results can be qualitatively understood in terms of the baryon enhancement expected from hadronization by recombination. Identified charged-hadron nuclear-modification factors (RAB) are also presented. Enhancement of proton RAB values over meson RAB values was observed in central He3+Au, Cu+Au, and U+U collisions. The proton RAB values measured in the p+Al collision system were found to be consistent with RAB values of ϕ, π±, K±, and π0 mesons, which may indicate that the size of the system produced in p+Al collisions is too small for recombination to cause a noticeable increase in proton production.

关键词： Hadron production Relativistic heavy-ion collisions Hadrons Kaons Pions Protons

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Charm- and bottom-quark production in Au+Au collisions at sNN=200 GeV

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Physical Review C 2024年第4期109卷 044907-044907页

作者： N. J. Abdulameer U. Acharya A. Adare C. Aidala N. N. Ajitanand Y. Akiba M. Alfred N. Apadula H. Asano B. Azmoun V. Babintsev M. Bai N. S. Bandara B. Bannier K. N. Barish S. Bathe A. Bazilevsky M. Beaumier S. Beckman R. Belmont A. Berdnikov Y. Berdnikov L. Bichon B. Blankenship D. S. Blau J. S. Bok V. Borisov K. Boyle M. L. Brooks J. Bryslawskyj V. Bumazhnov S. Campbell V. Canoa Roman C.-H. Chen M. Chiu C. Y. Chi I. J. Choi J. B. Choi T. Chujo Z. Citron M. Connors R. Corliss Y. Corrales Morales M. Csanád T. Csörgő T. W. Danley A. Datta M. S. Daugherity G. David C. T. Dean K. DeBlasio K. Dehmelt A. Denisov A. Deshpande E. J. Desmond A. Dion P. B. Diss J. H. Do V. Doomra A. Drees K. A. Drees J. M. Durham A. Durum A. Enokizono R. Esha B. Fadem W. Fan N. Feege D. E. Fields M. Finger, Jr. M. Finger D. Firak D. Fitzgerald S. L. Fokin J. E. Frantz A. Franz A. D. Frawley P. Gallus C. Gal P. Garg H. Ge M. Giles F. Giordano A. Glenn Y. Goto N. Grau S. V. Greene M. Grosse Perdekamp T. Gunji T. Hachiya J. S. Haggerty K. I. Hahn H. Hamagaki H. F. Hamilton J. Hanks S. Y. Han M. Harvey S. Hasegawa T. O. S. Haseler K. Hashimoto T. K. Hemmick X. He J. C. Hill A. Hodges R. S. Hollis K. Homma B. Hong T. Hoshino N. Hotvedt J. Huang K. Imai M. Inaba A. Iordanova D. Isenhower D. Ivanishchev B. V. Jacak M. Jezghani X. Jiang Z. Ji B. M. Johnson D. Jouan D. S. Jumper S. Kanda J. H. Kang D. Kawall A. V. Kazantsev J. A. Key V. Khachatryan A. Khanzadeev A. Khatiwada B. Kimelman C. Kim D. J. Kim E.-J. Kim G. W. Kim M. Kim T. Kim D. Kincses A. Kingan E. Kistenev R. Kitamura J. Klatsky D. Kleinjan P. Kline T. Koblesky B. Komkov D. Kotov L. Kovacs B. Kurgyis K. Kurita M. Kurosawa Y. Kwon J. G. Lajoie D. Larionova A. Lebedev S. Lee S. H. Lee M. J. Leitch N. A. Lewis S. H. Lim M. X. Liu X. Li D. A. Loomis D. Lynch S. Lökös T. Majoros Y. I. Makdisi M. Makek A. Manion V. I. Manko E. Mannel M. McCumber P. L. McGaughey D. McGlinchey C. McKinney A. Meles M. Mendoza A. C. Mignerey A. Milov D. K. Mishra J. T. Mitchell M. Mitrankova Iu. Mitrankov S. Miyas Debrecen University H-4010 Debrecen Egyetem tér 1 Hungary Georgia State University Atlanta Georgia 30303 USA University of Colorado Boulder Colorado 80309 USA Department of Physics University of Michigan Ann Arbor Michigan 48109-1040 USA Chemistry Department Stony Brook University SUNY Stony Brook New York 11794-3400 USA RIKEN Nishina Center for Accelerator-Based Science Wako Saitama 351-0198 Japan RIKEN BNL Research Center Brookhaven National Laboratory Upton New York 11973-5000 USA Department of Physics and Astronomy Howard University Washington DC 20059 USA Iowa State University Ames Iowa 50011 USA Department of Physics and Astronomy Stony Brook University SUNY Stony Brook New York 11794-3800 USA Kyoto University Kyoto 606-8502 Japan Physics Department Brookhaven National Laboratory Upton New York 11973-5000 USA IHEP Protvino State Research Center of Russian Federation Institute for High Energy Physics Protvino 142281 Russia Collider-Accelerator Department Brookhaven National Laboratory Upton New York 11973-5000 USA Department of Physics University of Massachusetts Amherst Massachusetts 01003-9337 USA University of California-Riverside Riverside California 92521 USA Baruch College City University of New York New York New York 10010 USA Physics and Astronomy Department University of North Carolina at Greensboro Greensboro North Carolina 27412 USA Saint Petersburg State Polytechnic University St. Petersburg 195251 Russia Vanderbilt University Nashville Tennessee 37235 USA National Research Center “Kurchatov Institute” Moscow 123098 Russia National Research Nuclear University MEPhI Moscow Engineering Physics Institute Moscow 115409 Russia New Mexico State University Las Cruces New Mexico 88003 USA Los Alamos National Laboratory Los Alamos New Mexico 87545 USA Columbia University New York New York 10027 and Nevis Laboratories Irvington New York 10533 USA University of Illinois at Urbana-Champaign Urbana Illinois 61801 USA Je

The invariant yield of electrons from open-heavy-flavor decays for 1<pT<8 GeV/c at midrapidity |y|<0.35 in Au+Au collisions at sNN = 200 GeV has been measured by the PHENIX experiment at the BNL Relativistic ... 详细信息

The invariant yield of electrons from open-heavy-flavor decays for 1

关键词： Hadronic decays Jets & heavy flavor physics Particle & resonance production Bottom quark Charm quark Hadron colliders

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Publisher Correction: Ageing limits stemness and tumorigenesis by reprogramming iron homeostasis

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Nature 2025年 2025 May 22页

作者： Xueqian Zhuang Qing Wang Simon Joost Alexander Ferrena David T Humphreys Zhuxuan Li Melissa Blum Klavdija Krause Selena Ding Yuna Landais Yingqian Zhan Yang Zhao Ronan Chaligne Joo-Hyeon Lee Sebastian E Carrasco Umeshkumar K Bhanot Richard P Koche Matthew J Bott Pekka Katajisto Yadira M Soto-Feliciano Thomas Pisanic Tiffany Thomas Deyou Zheng Emily S Wong Tuomas Tammela Cancer Biology and Genetics Program Sloan Kettering Institute Memorial Sloan Kettering Cancer Center New York NY USA. Victor Chang Cardiac Research Institute Sydney New South Wales Australia. Institute for Clinical and Translational Research Albert Einstein College of Medicine New York NY USA. Weill Cornell Graduate School of Medical Science Weill Cornell Medicine New York NY USA. Center for Epigenetics Research Memorial Sloan Kettering Cancer Center New York NY USA. Department of Biomedical Engineering Johns Hopkins University Baltimore MD USA. Computational and Systems Biology Program Sloan Kettering Institute Memorial Sloan Kettering Cancer Center New York NY USA. Wellcome-MRC Cambridge Stem Cell Institute Jeffrey Cheah Biomedical Centre University of Cambridge Cambridge UK. Department of Physiology Development and Neuroscience University of Cambridge Cambridge UK. Laboratory of Comparative Pathology Weill Cornell Medicine Memorial Sloan Kettering Cancer Center and Rockefeller University New York NY USA. Pathology Core Facility Department of Pathology Memorial Sloan Kettering Cancer Center New York NY USA. Institute of Biotechnology HiLIFE University of Helsinki Helsinki Finland. Department of Cell and Molecular Biology Karolinska Institute Stockholm Sweden. Faculty of Biological and Environmental Sciences University of Helsinki Helsinki Finland. David H. Koch Institute for Integrative Cancer Research Massachusetts Institute of Technology Cambridge MA USA. Department of Biology Massachusetts Institute of Technology Cambridge MA USA. Institute for NanoBioTechnology Department of Oncology-Cancer Genetics and Epigenetics Johns Hopkins University Baltimore MD USA. Department of Pathology and Cell Biology Columbia University College of Physicians and Surgeons New York NY USA. Departments of Genetics Neurology and Neuroscience Albert Einstein College of Medicine New York NY USA. School of Biotechnology and Biomolecular Sciences UNSW Sy

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On-body non-invasive glucose monitoring sensor based on high figure of merit (FoM) surface plasmonic microwave resonator

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Scientific reports 2023年第1期13卷 17527页

作者： Farzad Soltanian Mehdi Nosrati Saleh Mobayen Chuan-Chun Li Telung Pan Ming-Ta Ke Paweł Skruch Department of Electrical Engineering University of Alberta Edmonton Canada. Department of Electrical Engineering Manhattan College New York USA. Department of Electrical Engineering University of Zanjan Zanjan Iran. mobayens@yuntech.edu.tw. Graduate School of Intelligent Data Science National Yunlin University of Science and Technology Douliou 640301 Yunlin Taiwan. mobayens@yuntech.edu.tw. National Taiwan University Hospital Yunlin Branch Yunlin Taiwan. a***@***. Bachelor Program in Interdisciplinary Studies College of Future National Yunlin University of Science and Technology Yunlin 64002 Taiwan. Graduate School of Intelligent Data Science National Yunlin University of Science and Technology Douliou 640301 Yunlin Taiwan. Department of Automatic Control and Robotics AGH University of Science and Technology 30-059 Kraków Poland.

High-figure of merit (FoM) plasmonic microwave resonator is researched as a non-invasive on-body sensor to monitor the human body's blood glucose variation rate in adults for biomedical applications, e.g., diabetic patients. The resonance frequencies of the proposed sensor are measured to be around [Formula: see text] GHz and [Formula: see text] GHz over the frequency band of DC to 6GHz which are suitable for monitoring interstitial fluid (ISF) changing rate. The [Formula: see text] sensor is experimentally wrapped on the human body arm to monitor the blood glucose changing rate via amplitude and frequency variations of the sensor. Amplitude variation and frequency shift are measured to be around 7 dB and 30 MHz, respectively. The measured results demonstrate the high precision of the proposed approach to depict a valid diagram for glucose changing rate due to good impedance matching of the designed microwave sensor and human body. The sensor is shown to enhance the sensitivity by a factor of 5 compared to the conventional ones.

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AHR is a Zika virus host factor and a candidate target for antiviral therapy (vol 52, pg 941, 2020)

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NATURE NEUROSCIENCE 2020年第10期23卷 1307-1307页

作者： Giovannoni, Federico Bosch, Irene Polonio, Carolina Manganeli Torti, Maria F. Wheeler, Michael A. Li, Zhaorong Romorini, Leonardo Rodriguez Varela, Maria S. Rothhammer, Veit Barroso, Andreia Tjon, Emily C. Sanmarco, Liliana M. Takenaka, Maisa C. Modaresi, Seyed Mohamad Sadegh Gutierrez-Vazquez, Cristina Zanluqui, Nagela Ghabdan dos Santos, Nilton Barreto Munhoz, Carolina Demarchi Wang, Zhongyan Damonte, Elsa B. Sherr, David Gehrke, Lee Peron, Jean Pierre Schatzmann Garcia, Cybele C. Quintana, Francisco J. Ann Romney Center for Neurologic Diseases Brigham and Women’s Hospital Harvard Medical School Boston MA USA Laboratorio de Estrategias Antivirales Departamento de Química Biológica Facultad de Ciencias Exactas y Naturales Universidad de Buenos Aires. CONICET—Instituto de Química Biológica Buenos Aires Argentina Institute for Medical Engineering and Science Massachusetts Institute of Technology Cambridge MA USA Department of Medicine Mount Sinai School of Medicine New York NY USA Neuroimmune Interactions Laboratory Immunology Department—ICB IV University of São Paulo São Paulo Brazil Scientific Platform Pasteur—USP University of São Paulo São Paulo Brazil Laboratorio de Investigación aplicada a Neurociencias Fundación para la Lucha contra las Enfermedades Neurológicas de la Infancia Buenos Aires Argentina Immunopathology and Allergy Post Graduate Program School of Medicine University of São Paulo São Paulo Brazil Department of Pharmacology Institute of Biomedical Science University of São Paulo São Paulo Brazil Dept. of Environmental Health Boston University School of Public Health Boston MA USA Program in Virology Division of Medical Sciences Harvard Medical School Boston MA USA Broad Institute of MIT and Harvard Cambridge MA USA

Zika virus (ZIKV) is a flavivirus linked to multiple birth defects including microcephaly, known as congenital ZIKV syndrome. The identification of host factors involved in ZIKV replication may guide efficacious therapeutic interventions. In genome-wide transcriptional studies, we found that ZIKV infection triggers aryl hydrocarbon receptor (AHR) activation. Specifically, ZIKV infection induces kynurenine (Kyn) production, which activates AHR, limiting the production of type I interferons (IFN-I) involved in antiviral immunity. Moreover, ZIKV-triggered AHR activation suppresses intrinsic immunity driven by the promyelocytic leukemia (PML) protein, which limits ZIKV replication. AHR inhibition suppressed the replication of multiple ZIKV strains in vitro and also suppressed replication of the related flavivirus dengue. Finally, AHR inhibition with a nanoparticle-delivered AHR antagonist or an inhibitor developed for human use limited ZIKV replication and ameliorated newborn microcephaly in a murine model. In summary, we identified AHR as a host factor for ZIKV replication and PML protein as a driver of anti-ZIKV intrinsic immunity.

关键词： Immunology Microbiology

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Addressing climate change with behavioral science: A global intervention tournament in 63 countries

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Science Advances 2024年第6期10卷 eadj5778页

作者： Vlasceanu, Madalina Doell, Kimberly C. Bak-Coleman, Joseph B. Todorova, Boryana Berkebile-Weinberg, Michael M. Grayson, Samantha J. Patel, Yash Goldwert, Danielle Pei, Yifei Chakroff, Alek Pronizius, Ekaterina van den Broek, Karlijn L. Vlasceanu, Denisa Constantino, Sara Morais, Michael J. Schumann, Philipp Rathje, Steve Fang, Ke Aglioti, Salvatore Maria Alfano, Mark Alvarado-Yepez, Andy J. Andersen, Angélica Anseel, Frederik Apps, Matthew A.J. Asadli, Chillar Awuor, Fonda Jane Azevedo, Flavio Basaglia, Piero Bélanger, Jocelyn J. Berger, Sebastian Bertin, Paul Bialek, Michal Bialobrzeska, Olga Blaya-Burgo, Michelle Bleize, Daniëlle N.M. Bø, Simen Boecker, Lea Boggio, Paulo S. Borau, Sylvie Bos, Björn Bouguettaya, Ayoub Brauer, Markus Brick, Cameron Brik, Tymofii Briker, Roman Brosch, Tobias Buchel, Ondrej Buonauro, Daniel Butalia, Radhika Carvacho, Héctor Chamberlain, Sarah A.E. Chan, Hang-Yee Chow, Dawn Chung, Dongil Cian, Luca Cohen-Eick, Noa Contreras-Huerta, Luis Sebastian Contu, Davide Cristea, Vladimir Cutler, Jo D'Ottone, Silvana De Keersmaecker, Jonas Delcourt, Sarah Delouvée, Sylvain Diel, Kathi Douglas, Benjamin D. Drupp, Moritz A. Dubey, Shreya Ekmanis, Jānis Elbaek, Christian T. Elsherif, Mahmoud Engelhard, Iris M. Escher, Yannik A. Etienne, Tom W. Farage, Laura Farias, Ana Rita Feuerriegel, Stefan Findor, Andrej Freira, Lucia Friese, Malte Gains, Neil Philip Gallyamova, Albina Geiger, Sandra J. Genschow, Oliver Gjoneska, Biljana Gkinopoulos, Theofilos Goldberg, Beth Goldenberg, Amit Gradidge, Sarah Grassini, Simone Gray, Kurt Grelle, Sonja Griffin, Siobhán M. Grigoryan, Lusine Grigoryan, Ani Grigoryev, Dmitry Gruber, June Guilaran, Johnrev Hadar, Britt Hahnel, Ulf J.J. Halperin, Eran Harvey, Annelie J. Haugestad, Christian A.P. Herman, Aleksandra M. Hershfield, Hal E. Himichi, Toshiyuki Hine, Donald W. Hofmann, Wilhelm Howe, Lauren Huaman-Chulluncuy, Enma T. Huang, Guanxiong Ishii, Tatsunori Ito, Ayahito Jia, Fanli Jost, John T. Jovanović, Veljko Jurgiel, Dominika Kácha, Ondřej Kankaanpää, Reeta Kant Department of Psychology New York University New YorkNY10003 United States Department of cognition emotion and Methods in Psychology Faculty of Psychology University of Vienna Vienna1010 Austria Craig newmark center for Journalism ethics and Security Columbia University New YorkNY10018 United States Institute for Rebooting Social Media Harvard University CambridgeMA02138 United States Department of Psychology Stanford University StanfordcA94305 United States San luis Obispo cA93405 United States Copernicus institute of Sustainable development Utrecht University Utrecht3584 cB Netherlands Department of Psychology University of Pittsburgh PittsburghPA15260 United States School of Public Policy and Urban Affairs Northeastern University BostonMA02115 United States Department of Psychology Northeastern University BostonMA02115 United States Amazon SeattleWA98109 United States Department of Psychology Carl von Ossietzky University of Oldenburg Oldenburg26129 Germany Santa lucia Foundation IRccS Rome179 Italy Department of Psychology Sapienza University of Rome Rome185 Italy Department of Philosophy Macquarie University SydneynSW2000 Australia Universidad Peruana cayetano heredia San Martín de Porres15102 Peru Post-Graduation Program in linguistics Federal University of Paraná Curitiba80060150 Brazil UnSW Business School University of new South Wales SydneynSW2052 Australia Centre for human Brain health School of Psychology University of Birmingham BirminghamB15 2tt United Kingdom Psychology Scientific Research institute Baku Azerbaijan Kenya Marine and Fisheries Research institute Kisumu1881-40100 Kenya Department of Psychology University of Groningen Groningen9712tS Netherlands Department of economics University of hamburg Hamburg20146 Germany De-partment of Psychology New York University Abu dhabi Abu dhabi129188 United Arab Emirates Department of Sociology University of Bern Bern3012 Switzerland LAPcOS Univers

Effectively reducing climate change requires marked, global behavior change. However, it is unclear which strategies are most likely to motivate people to change their climate beliefs and behaviors. Here, we tested 11 expert-crowdsourced interventions on four climate mitigation outcomes: beliefs, policy support, information sharing intention, and an effortful tree-planting behavioral task. Across 59,440 participants from 63 countries, the interventions’ effectiveness was small, largely limited to nonclimate skeptics, and differed across outcomes: Beliefs were strengthened mostly by decreasing psychological distance (by 2.3%), policy support by writing a letter to a future-generation member (2.6%), information sharing by negative emotion induction (12.1%), and no intervention increased the more effortful behavior—several interventions even reduced tree planting. Last, the effects of each intervention differed depending on people’s initial climate beliefs. These findings suggest that the impact of behavioral climate interventions varies across audiences and target behaviors. © 2024 American Association for the Advancement of Science. All rights reserved.

关键词： Climate change

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