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检索条件"机构=Graduate Program in Computational Science"
384 条 记 录,以下是211-220 订阅
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Publisher Correction: Ageing limits stemness and tumorigenesis by reprogramming iron homeostasis
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Nature 2025年 2025 May 22页
作者: Xueqian Zhuang Qing Wang Simon Joost Alexander Ferrena David T Humphreys Zhuxuan Li Melissa Blum Klavdija Krause Selena Ding Yuna Landais Yingqian Zhan Yang Zhao Ronan Chaligne Joo-Hyeon Lee Sebastian E Carrasco Umeshkumar K Bhanot Richard P Koche Matthew J Bott Pekka Katajisto Yadira M Soto-Feliciano Thomas Pisanic Tiffany Thomas Deyou Zheng Emily S Wong Tuomas Tammela Cancer Biology and Genetics Program Sloan Kettering Institute Memorial Sloan Kettering Cancer Center New York NY USA. Victor Chang Cardiac Research Institute Sydney New South Wales Australia. Institute for Clinical and Translational Research Albert Einstein College of Medicine New York NY USA. Weill Cornell Graduate School of Medical Science Weill Cornell Medicine New York NY USA. Center for Epigenetics Research Memorial Sloan Kettering Cancer Center New York NY USA. Department of Biomedical Engineering Johns Hopkins University Baltimore MD USA. Computational and Systems Biology Program Sloan Kettering Institute Memorial Sloan Kettering Cancer Center New York NY USA. Wellcome-MRC Cambridge Stem Cell Institute Jeffrey Cheah Biomedical Centre University of Cambridge Cambridge UK. Department of Physiology Development and Neuroscience University of Cambridge Cambridge UK. Laboratory of Comparative Pathology Weill Cornell Medicine Memorial Sloan Kettering Cancer Center and Rockefeller University New York NY USA. Pathology Core Facility Department of Pathology Memorial Sloan Kettering Cancer Center New York NY USA. Institute of Biotechnology HiLIFE University of Helsinki Helsinki Finland. Department of Cell and Molecular Biology Karolinska Institute Stockholm Sweden. Faculty of Biological and Environmental Sciences University of Helsinki Helsinki Finland. David H. Koch Institute for Integrative Cancer Research Massachusetts Institute of Technology Cambridge MA USA. Department of Biology Massachusetts Institute of Technology Cambridge MA USA. Institute for NanoBioTechnology Department of Oncology-Cancer Genetics and Epigenetics Johns Hopkins University Baltimore MD USA. Department of Pathology and Cell Biology Columbia University College of Physicians and Surgeons New York NY USA. Departments of Genetics Neurology and Neuroscience Albert Einstein College of Medicine New York NY USA. School of Biotechnology and Biomolecular Sciences UNSW Sy
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From laptops to supercomputers: a single highly scalable code base for spiking neuronal network simulations
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BMC Neuroscience 2013年 第1期14卷 1-2页
作者: Susanne Kunkel Abigail Morrison Markus Diesmann Maximilian Schmidt Jochen M Eppler Moritz Helias Hans E Plesser Jun Igarashi Tomoki Fukai Gen Masumoto Shin Ishii Simulation Laboratory Neuroscience - Bernstein Facility Simulation and Database Technology Institute for Advanced Simulation Jülich Aachen Research Alliance Jülich Research Centre Germany Institute of Neuroscience and Medicine (INM-6) and Institute for Advanced Simulation (IAS-6) Jülich Research Centre and JARA Germany Bernstein Center Freiburg Albert-Ludwig University of Freiburg Germany Institute of Cognitive Neuroscience Faculty of Psychology Ruhr-University Bochum Germany Medical Faculty RWTH University Aachen Germany Laboratory for Neural Circuit Theory RIKEN Brain Science Institute Wako Japan Department of Mathematical Sciences and Technology Norwegian University of Life Sciences Aas Norway High-Performance Computing Team RIKEN Computational Science Research Program Kobe Japan Integrated Systems Biology Laboratory Department of Systems Science Graduate School of Informatics Kyoto University Japan
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Space distribution of the rescattering electron wavepacket in the laser-atom interactions
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Journal of Physics: Conference Series 2009年 第1期185卷
作者: X M Tong K Sasaki K Hino N Toshima Doctoral Program in Materials Science Graduate School of Pure and Applied Sciences University of Tsukuba 1-1-1 Tennodai Tsukuba Ibaraki 305–8573 Japan Center for Computational Sciences University of Tsukuba 1-1-1 Tennodai Tsukuba Ibaraki 305–8577 Japan Doctoral Program in Frontier Science Graduate School of Pure and Applied Sciences University of Tsukuba 1-1-1 Tennodai Tsukuba Ibaraki 305–8573 Japan
We investigated the space distribution of the rescattering electron wavepacket created in the laser-atom interaction by a full quantum simulation and a semiclassical calculation. Both the quantum simulation and the se...
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A new time-dependent scattering theory and its application to the capture of antiprotons by atoms
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Journal of Physics: Conference Series 2009年 第1期185卷
作者: X M Tong K Hino N Toshima Doctoral Program in Materials Science Graduate School of Pure and Applied Sciences University of Tsukuba 1-1-1 Tennodai Tsukuba Ibaraki 305–8573 Japan Center for Computational Sciences University of Tsukuba 1-1-1 Tennodai Tsukuba Ibaraki 305–8577 Japan Doctoral Program in Frontier Science Graduate School of Pure and Applied Sciences University of Tsukuba 1-1-1 Tennodai Tsukuba Ibaraki 305–8573 Japan
We presented a theoretical method to study the capture of the antiprotrons by atoms solving a Chew-Goldberger-type integral equation directly. The scattering boundary conditions are automatically satisfied by adiabati...
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Universal mechanical response of metallic glasses during strain-rate-dependent uniaxial compression
arXiv
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arXiv 2022年
作者: Jin, Weiwei Datye, Amit Schwarz, Udo D. Shattuck, Mark D. O'Hern, Corey S. Department of Mechanical Engineering and Materials Science Yale University New HavenCT06520 United States Department of Chemical and Environmental Engineering Yale University New HavenCT06520 United States Benjamin Levich Institute Physics Department The City College of New York New YorkNY10031 United States Department of Physics Yale University New HavenCT06520 United States Department of Applied Physics Yale University New HavenCT06520 United States Graduate Program in Computational Biology and Bioinformatics Yale University New HavenCT06520 United States
Experimental data on the compressive strength σmax versus strain rate Ε eng for metallic glasses undergoing uniaxial compression shows significantly different behavior for different alloys. For some metallic glasse... 详细信息
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Efficient Formulation of Polarizable Gaussian Multipole Electrostatics for Biomolecular Simulations
arXiv
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arXiv 2020年
作者: Wei, Haixin Qi, Ruxi Wang, Junmei Cieplak, Piotr Duan, Yong Luo, Ray Departments of Molecular Biology and Biochemistry Chemical and Biomolecular Engineering Materials Science and Engineering and Biomedical Engineering Graduate Program in Chemical and Materials Physics University of California Irvine IrvineCA92697 United States Department of Pharmaceutical Sciences and Computational Chemical Genomics Screening Center School of Pharmacy University of Pittsburgh PittsburghPA15261 United States SBP Medical Discovery Institute 10901 North Torrey Pines Road San diegoCA92037 United States UC Davis Genome Center Department of Biomedical Engineering University of California Davis One Shields Avenue DavisCA95616 United States
Molecular dynamics simulations of biomolecules have been widely adopted in biomedical studies. As classical point-charge models continue to be used in routine biomolecular applications, there have been growing demands... 详细信息
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Chemical complexity of phosphorous bearing species in various regions of the interstellar medium
arXiv
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arXiv 2021年
作者: Sil, Milan Srivastav, Satyam Bhat, Bratati Mondal, Suman Kumar Gorai, Prasanta Ghosh, Rana Shimonishi, Takashi Chakrabarti, Sandip K. Sivaraman, Bhalamurugan Pathak, Amit Nakatani, Naoki Furuya, Kenji Das, Ankan Indian Centre for Space Physics 43 Chalantika Garia Station Road Kolkata700084 India Department of Physics Institute of Science Banaras Hindu University Varanasi221005 India Department of Space Earth & Environment Chalmers University of Technology GothenburgSE-412 96 Sweden Center for Transdisciplinary Research Niigata University Nishi-ku Niigata950-2181 Japan Environmental Science Program Department of Science Faculty of Science Niigata University Nishi-ku Niigata950-2181 Japan Physical Research Laboratory Navrangpura Ahmedabad380009 India Institute for Catalysis Hokkaido University N21W10 Kita-ku Sapporo Hokkaido001-0021 Japan Department of Chemistry Graduate School of Science and Engineering Tokyo Metropolitan University 1-1 Minami-Osawa Hachioji Tokyo192-0397 Japan Center for Computational Sciences University of Tsukuba Tsukuba305-8577 Japan National Astronomical Observatory of Japan Tokyo181-8588 Japan
Phosphorus related species are not known to be as omnipresent in space as hydrogen, carbon, nitrogen, oxygen, and sulfur-bearing species. Astronomers spotted very few P-bearing molecules in the interstellar medium and... 详细信息
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Considering discrepancy when calibrating a mechanistic electrophysiology model
arXiv
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arXiv 2020年
作者: Lei, Chon Lok Ghosh, Sanmitra Whittaker, Dominic G. Aboelkassem, Yasser Beattie, Kylie A. Cantwell, Chris D. Delhaas, Tammo Houston, Charles Novaes, Gustavo Montes Panfilov, Alexander V. Pathmanathan, Pras Riabiz, Marina Weber dos Santos, Rodrigo Worden, Keith Mirams, Gary R. Wilkinson, Richard D. Computational Biology & Health Informatics Dept. of Computer Science University of Oxford United Kingdom MRC Biostatistics Unit University of Cambridge United Kingdom Centre for Mathematical Medicine & Biology School of Mathematical Sciences University of Nottingham United Kingdom Department of Bioengineering University of California San Diego United States Systems Modeling and Translational Biology GlaxoSmithKline R&D Stevenage United Kingdom ElectroCardioMaths Programme Centre for Cardiac Engineering Imperial College London United Kingdom CARIM School for Cardiovascular Diseases Maastricht University Netherlands Graduate Program in Computational Modeling Universidade Federal de Juiz de Fora Brazil Department of Physics and Astronomy Ghent University Belgium Laboratory of Computational Biology and Medicine Ural Federal University Ekaterinburg Russia U.S. Food and Drug Administration Center for Devices and Radiological Health Office of Science and Engineering Laboratories United States Department of Biomedical Engineering King’s College London Alan Turing Institute United Kingdom Dynamics Research Group Department of Mechanical Engineering University of Sheffield United Kingdom School of Mathematics and Statistics University of Sheffield United Kingdom
Uncertainty quantification (UQ) is a vital step in using mathematical models and simulations to take decisions. The field of cardiac simulation has begun to explore and adopt UQ methods to characterise uncertainty in ... 详细信息
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TGF-β and RAS jointly unmask primed enhancers to drive metastasis
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Cell 2024年 第22期187卷 6182-6199.e29页
作者: Lee, Jun Ho Sánchez-Rivera, Francisco J. He, Lan Basnet, Harihar Chen, Fei Xavier Spina, Elena Li, Liangji Torner, Carles Chan, Jason E. Yarlagadda, Dig Vijay Kumar Park, Jin Suk Sussman, Carleigh Rudin, Charles M. Lowe, Scott W. Tammela, Tuomas Macias, Maria J. Koche, Richard P. Massagué, Joan Cancer Biology and Genetics Program Sloan Kettering Institute Memorial Sloan Kettering Cancer Center New York 10065 NY United States Institute for Research in Biomedicine The Barcelona Institute of Science and Technology Barcelona 08028 Spain Department of Medicine Memorial Sloan Kettering Cancer Center New York 10065 NY United States Computational and Systems Biology Program Sloan Kettering Institute Memorial Sloan Kettering Cancer Center New York 10065 NY United States Tri-Institutional Graduate Program in Computational Biology and Medicine Weill Cornell Medical College New York 10065 NY United States Howard Hughes Medical Institute Memorial Sloan Kettering Cancer Center New York 10065 NY United States Institució Catalana de Recerca i Estudis Avançats (ICREA) Barcelona 08010 Spain Center for Epigenetics Research Memorial Sloan Kettering Cancer Center New York 10065 NY United States Department of Biology Massachusetts Institute of Technology Cambridge 02142 MA United States
Epithelial-to-mesenchymal transitions (EMTs) and extracellular matrix (ECM) remodeling are distinct yet important processes during carcinoma invasion and metastasis. Transforming growth factor β (TGF-β) and RAS, sig... 详细信息
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Enriching and Characterizing T-Cell Repertoires from 3' Barcoded Single-Cell Whole Transcriptome Amplification Products
arXiv
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arXiv 2022年
作者: Jivanjee, Tasneem Ibrahim, Samira Nyquist, Sarah K. James Gatter, G. Bromley, Joshua D. Jaiswal, Swati Berger, Bonnie Behar, Samuel M. Christopher Love, J. Shalek, Alex K. Institute for Medical Engineering & Science Department of Chemistry Massachusetts Institute of Technology CambridgeMA United States Koch Institute for Integrative Cancer Research Massachusetts Institute of Technology CambridgeMA United States Ragon Institute of MGH MIT and Harvard CambridgeMA United States Broad Institute of MIT and Harvard CambridgeMA United States Massachusetts Institute of Technology CambridgeMA United States Program in Computational and Systems Biology Massachusetts Institute of Technology CambridgeMA United States Computer Science and Artificial Intelligence Laboratory Massachusetts Institute of Technology CambridgeMA United States Microbiology Graduate Program Massachusetts Institute of Technology CambridgeMA02139 United States Department of Microbiology and Physiological Systems University of Massachusetts Medical School WorcesterMA United States Department of Mathematics Massachusetts Institute of Technology CambridgeMA United States Department of Chemical Engineering Massachusetts Institute of Technology CambridgeMA United States
Antigen-specific T cells play an essential role in immunoregulation and many diseases such as cancer. Characterizing the T cell receptor (TCR) sequences that encode T cell specificity is critical for elucidating the a... 详细信息
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