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International Electron Devices Meeting (IEDM)

作者： Eunah Ko Kanghwan Kim Mihály Vöröslakos Sungjin Oh György Buzsáki Kensall D. Wise Euisk Yoon Department of Electrical Engineering and Computer Science University of Michigan Ann Arbor MI USA Center for BioMicrosystems Brain Science Institute Korea Institute of Science and Technology Seoul Korea Neuroscience Institute Langone Medical Center New York University New York NY USA Department of Biomedical Engineering University of Michigan Ann Arbor MI USA Center for Nanomedicine Institute for Basic Science (IBS) and Graduate Program of Nano Biomedical Engineering (Nano BME) Advanced Science Institute Yonsei University Seoul Korea

ISBN: (纸本)9781665489607

Evolution of “Michigan Probes” has enabled unraveling the connectivity of neurons at cellular resolution and their dynamic interaction within and across brain areas that underlie behavioral and cognitive functions. Recently, micro-LEDs were monolithically integrated for optogenetic neuromodulation at scale without requiring external optical fiber connection. The ‘hectoSTAR’ micro-LED optoelectrode features 256 recording electrodes and 128 stimulation micro-LEDs in four silicon micro-needle shanks, covering a large volume with 1.3-mm × 0.9-mm cross-sectional area located as deep as 6 mm inside the brain. Technical challenges to overcome in scaling of optogenetic probes will be discussed, followed by future direction.

关键词： Optical fibers Electrodes Brain Optogenetics Silicon Recording Optical fiber devices

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A Comparative Study of Meningioma Tumors Segmentation Methods from MR Images 3

A Comparative Study of Meningioma Tumors Segmentation Method...

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3rd International Conference on Signal Processing and Information Security, ICSPIS 2020

作者： Alkhodari, Mohanad Hassanin, Omnia Dhou, Salam Biomed. Eng. Graduate Program American University of Sharjah Sharjah United Arab Emirates Dept. of Computer Science and Engineering American University of Sharjah Sharjah United Arab Emirates

ISBN: (纸本)9781728189987

Brain tumor segmentation from magnetic resonance (MR) images can have a great impact on improving diagnostics, growth rate prediction, and treatment planning. In this paper, we provide a comparative study of four well-known segmentation algorithms, namely k-means clustering, histogram thresholding (Otsu), fuzzy c-means thresholding, and region growing. For the region growing algorithm, the seed selection process is automated and enhanced by preprocessing the images and approximating the tumor regions using initial clustering and/or thresholding approaches. The evaluation and comparison of the algorithms is conducted using a data-set of T1-Weighted Contrast-Enhanced magnetic resonance imaging (MRI) brain images. Ground truth tumor images were provided by three experienced radiologists and are used in the evaluation process. Results showed that the enhanced region growing method had the highest mean dice similarity coefficient with a score of 0.87, and the lowest under-segmentation rate (17.46%). The fuzzy c-means thresholding method had the lowest over-segmentation rate (0.03%). This study serves as a baseline for other advanced tumor segmentation studies such as the ones using the emergent machine learning approaches. © 2020 IEEE.

关键词： Image segmentation

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Guiding Brain-to-Vocalization Decoder Design Using Structured Generalization Error 46

Guiding Brain-to-Vocalization Decoder Design Using Structure...

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46th Annual International Conference of the IEEE engineering in Medicine and Biology Society, EMBC 2024

作者： Huang, Jingya Tostado-Marcos, Pablo Narasimha, Sowmya Manojna Patel, Aashish N. Arneodo, Ezequiel. M. Gentner, Timothy Q. Mishne, Gal Gilja, Vikash University of California San Diego Department of Electrical and Computer Engineering La Jolla CA92092 United States University of California San Diego Department of Bioengineering La Jolla CA92092 United States University of California San Diego Institute for Neural Computation La Jolla CA92092 United States University of California San Diego Neuroscience Graduate Program La Jolla CA92092 United States University of California San Diego Department of Physics La Jolla CA92092 United States University of California San Diego Department of Psychology La Jolla CA92092 United States University of California San Diego Halicioǧlu Data Science Institute La Jolla CA92092 United States

ISBN: (纸本)9798350371499

State-of-the-art intracortical neuroprostheses currently enable communication at 60+ words per minute for anarthric individuals by training on over 10K sentences to account for phoneme variability in different word contexts. There is limited understanding about whether this performance can be maintained in decoding naturalistic speech with 40K+ word vocabularies across elicited, spontaneous, and conversational speech contexts. We introduce a vocal-unit-level generalization test to explicitly evaluate neural decoder performance with an expanded and more diverse behavioral repertoire. Tested on neural decoders modeling zebra finch vocalization, an analog to human vocal production, we compare three decoders with different input types: spike trains, neural factors, and firing rates. The factors and rates are latent neural features inferred using trained Latent Factor Analysis via Dynamical Systems (LFADS) models that capture the population neural dynamics during vocal production. While the conventional random holdout generalization error measure is similar for all three decoders, factor- and rate-based decoders outperform spike-based decoders when testing vocal-unit-holdout generalization error. These results suggest the later models better adapt to flexible vocalization inference when trained with partial observation of data variation, motivating further exploration of decoders incorporating latent neural and vocalization dynamics. © 2024 IEEE.

关键词： Errors

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Recurrence plots and convolutional neural networks applied to nonintrusive load monitoring

Recurrence plots and convolutional neural networks applied t...

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2020 IEEE Power and Energy Society General Meeting, PESGM 2020

作者： Cavalca, Diego L. Fernandes, Ricardo A. S. Federal University of São Carlos Graduate Program in Computer Science São Carlos Brazil Federal University of São Carlos Electrical Engineering Department São Carlos Brazil

ISBN: (纸本)9781728155081

The need to increasingly promote the efficient use of electricity for residential consumers motivated some researches to obtain solutions that allow the identification of loads for use in demand response programs and in the energy consumption disaggregation. Recently, the use of Convolutional Neural Networks for load identification has been common. However, it is necessary to transform the temporal signal into an image. In this sense, the present paper proposes a novel feature engineering stage, based on Recurrence Plots, to obtain the images for Nonintrusive Load Monitoring. In order to prove its effectiveness, the Recurrence Plots were compared to the Gramian Angular Difference Fields, which had already been applied in this context. For this purpose, it was used the REDD dataset, in which only the low frequency data measured in the main distribution panel were considered. Individual load measurements were only used for the labelling of the 90-seconds windows. The Convolutional Neural Network was trained and validated, considering two different strategies (multi-label and binary models), obtaining an F1-score of 66.05% and 72.65%, respectively. © 2020 IEEE.

关键词： Machine learning

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Local Periodicity-Based Beat Tracking for Expressive Classical Piano Music

arXiv

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arXiv 2023年

作者： Chiu, Ching-Yu Müller, Meinard Davies, Matthew E.P. Su, Alvin Wen-Yu Yang, Yi-Hsuan The Graduate Program of Multimedia Systems and Intelligent Computing National Cheng Kung University Academia Sinica Taiwan The International Audio Laboratories Erlangen Germany The Department of Informatics Engineering Centre for Informatics and Systems of the University of Coimbra University of Coimbra Portugal The Department of Computer Science and Information Engineering National Cheng Kung University Taiwan Yating Music Team Taiwan AI Labs Taiwan Research Center for IT Innovation Academia Sinica Taiwan

To model the periodicity of beats, state-of-the-art beat tracking systems use "post-processing trackers" (PPTs) that rely on several empirically determined global assumptions for tempo transition, which work well for music with a steady tempo. For expressive classical music, however, these assumptions can be too rigid. With two large datasets of Western classical piano music, namely the Aligned Scores and Performances (ASAP) dataset and a dataset of Chopin's Mazurkas (Maz-5), we report on experiments showing the failure of existing PPTs to cope with local tempo changes, thus calling for new methods. In this paper, we propose a new local periodicity-based PPT, called predominant local pulse-based dynamic programming (PLPDP) tracking, that allows for more flexible tempo transitions. Specifically, the new PPT incorporates a method called "predominant local pulses" (PLP) in combination with a dynamic programming (DP) component to jointly consider the locally detected periodicity and beat activation strength at each time instant. Accordingly, PLPDP accounts for the local periodicity, rather than relying on a global tempo assumption. Compared to existing PPTs, PLPDP particularly enhances the recall values at the cost of a lower precision, resulting in an overall improvement of F1-score for beat tracking in ASAP (from 0.473 to 0.493) and Maz-5 (from 0.595 to 0.838). © 2023, CC BY.

关键词： Dynamic programming

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Dementia Detection by Shopping Refugees Support Robot

Dementia Detection by Shopping Refugees Support Robot

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IEEE Global Conference on Life sciences and Technologies (LifeTech)

作者： Yuta Kishimoto Kenichi Arai Tetsuo Imai Toru Kobayashi Computer and Information Science Program Graduate School of Engineering Nagasaki University Nagasaki Japan Division of Electrical Engineering and Computer Science Graduate School of Engineering Nagasaki University Nagasaki Japan

ISBN: (数字)9781728170633

ISBN: (纸本)9781728170640

We have developed the Shopping Refugees Support Robot that enables the elderly to order items through Social Networking Service (SNS) by voice conversation without relying on smartphones. This paper proposes a detection method of dementia signs using this Robot. Concretely, deterioration of cognitive function is detected by the evaluation of short-term memory utilizing order history of the Robot. We expect detection of dementia signs on a daily basis without making the elderly person conscious of having a dementia test, by information that only the person knows. We implemented a prototype and confirmed its functional validity.

关键词： Dementia SNS Comunication robot Internet of Things Artificial Intelligence Robot Sympathetic Nervous System Dementia Internet of things Artificial Intelligence Refugees inspection methods Shopping Home shopping aged person

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Improving quantitation accuracy in isobaric-labeling mass spectrometry experiments with spectral library searching and feature-based peptide-spectrum match filter

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Scientific Reports 2023年第1期13卷 1-10页

作者： Kuo, Tzu-Yun Wang, Jen-Hung Huang, Yung-Wen Sung, Ting-Yi Chen, Ching-Tai Department of Biochemical Science and Technology National Taiwan University Taipei 10617 Taiwan Bioinformatics Program Taiwan International Graduate Program Institute of Statistical Science Academia Sinica Taipei 11529 Taiwan Institute of Information Science Academia Sinica Taipei 11529 Taiwan Institute of Biomedical Informatics National Yang Ming Chiao Tung University Taipei 11221 Taiwan Department of Computer Science and Information Engineering National Taiwan University Taipei 10617 Taiwan Department of Bioinformatics and Biomedical Engineering Asia University Taichung 41354 Taiwan Center for Precision Health Research Asia University Taichung 41354 Taiwan

Isobaric labeling relative quantitation is one of the dominating proteomic quantitation technologies. Traditional quantitation pipelines for isobaric-labeled mass spectrometry data are based on sequence database searching. In this study, we present a novel quantitation pipeline that integrates sequence database searching, spectral library searching, and a feature-based peptide-spectrum-match (PSM) filter using various spectral features for filtering. The combined database and spectral library searching results in larger quantitation coverage, and the filter removes PSMs with larger quantitation errors, retaining those with higher quantitation accuracy. Quantitation results show that the proposed pipeline can improve the overall quantitation accuracy at the PSM and protein levels. To our knowledge, this is the first study that utilizes spectral library searching to improve isobaric labeling-based quantitation. For users to conveniently perform the proposed pipeline, we have implemented the feature-based filter being executable on both Windows and Linux platforms;its executable files, user manual, and sample data sets are freely available at https://***/comics/Software_*** . Furthermore, with the developed filter, the proposed pipeline is fully compatible with the Trans-Proteomic Pipeline. © 2023, Springer Nature Limited.

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Quantifying Efficiency of Remote Excitation for Surface Enhanced Raman Spectroscopy in Molecular Junctions

arXiv

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arXiv 2023年

作者： Liao, Shusen Zhu, Yunxuan Ye, Qian Sanders, Stephen Yang, Jiawei Alabastri, Alessandro Natelson, Douglas Applied Physics Graduate Program Smalley-Curl Institute Rice University HoustonTX77005 United States Department of Physics and Astronomy Rice University HoustonTX77005 United States Department of Electrical and Computer Engineering Rice University HoustonTX77005 United States Department of Materials Science and NanoEngineering Rice University HoustonTX77005 United States

Surface-enhanced Raman spectroscopy (SERS) is enabled by local surface plasmon resonances (LSPRs) in metallic nanogaps. When SERS is excited by direct illumination of the nanogap, the background heating of lattice and electrons can prevent further manipulation of the molecules. To overcome this issue, we report SERS in electromigrated gold molecular junctions excited remotely: surface plasmon polaritons (SPPs) are excited at nearby gratings, propagate to the junction, and couple to the local nanogap plasmon modes. Like direct excitation, remote excitation of the nanogap can generate both SERS emission and an open-circuit photovoltage (OCPV). We compare SERS intensity and OCPV in both direct and remote illumination configurations. SERS spectra obtained by remote excitation are much more stable than those obtained through direct excitation when photon count rates are comparable. By statistical analysis of 33 devices, coupling efficiency of remote excitation is calculated to be around 10%, consistent with the simulated energy flow. Copyright © 2023, The Authors. All rights reserved.

关键词： Raman spectroscopy

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Measurement of Water Diffusion Coefficient in Cross-Linked Gelatins Using the Terahertz Time-Domain Spectroscopy Technique

Measurement of Water Diffusion Coefficient in Cross-Linked G...

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Conference on Lasers and Electro-Optics (CLEO)

作者： D. Walden D. Chakraborty J. Cheng A. Straksys A. Stirke W. CMA Melo A. Jukna I. Komissarov Roman Sobolewski Department of Physics and Astronomy University of Rochester Rochester New York USA Laboratory for Laser Energetics University of Rochester Rochester New York USA Materials Science Graduate Program University of Rochester Rochester New York USA State Research Institute Center for Physical Sciences & Technology Vilnius Lithuania Department of Physics Vilnius Gediminas Technical University Vilnius Lithuania Department of Electrical and Computer Engineering University of Rochester Rochester New York USA

A novel method has been developed to evaluate the water diffusion dynamics in gelatin-based gels, based on transient terahertz time-domain spectroscopy measurements. Such gels are widely used models for human skin.

ISBN: (纸本)9798350369311

关键词： Spectroscopy Measurement by laser beam Lasers and electrooptics Laser modes Skin Time-domain analysis Transient analysis Electro-optical waveguides

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Terahertz spin dynamics in rare-earth orthoferrites

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Photonics Insights 2022年第2期1卷 1-56页

作者： Xinwei Li Dasom Kim Yincheng Liu Junichiro Kono Department of Physics California Institute of TechnologyPasadenaUSA Department of Electrical and Computer Engineering Rice UniversityHoustonUSA Applied Physics Graduate Program Smalley-Curl InstituteRice UniversityHoustonUSA Department of Physics and Astronomy Rice UniversityHoustonUSA Department of Materials Science and NanoEngineering Rice UniversityHoustonUSA

Recent interest in developing fast spintronic devices and laser-controllable magnetic solids has sparked tremendous experimental and theoretical efforts to understand and manipulate ultrafast dynamics in *** of spin dynamics in the terahertz(THz)frequency range are particularly important for elucidating microscopic pathways toward novel device ***,we review THz phenomena related to spin dynamics in rare-earth orthoferrites,a class of materials promising for antiferromagnetic *** expand this topic into a description of four key elements.(1)We start by describing THz spectroscopy of spin excitations for probing magnetic phase transitions in thermal *** acoustic magnons are useful indicators of spin reorientation transitions,electromagnons that arise from dynamic magnetoelectric couplings serve as a signature of inversion-symmetry-breaking phases at low temperatures.(2)We then review the strong laser driving scenario,where the system is excited far from equilibrium and thereby subject to modifications to the free-energy *** pathways for ultrafast laser manipulation of magnetic order are discussed.(3)Furthermore,we review a variety of protocols to manipulate coherent THz magnons in time and space,which are useful capabilities for antiferromagnetic spintronic applications.(4)Finally,new insights into the connection between dynamic magnetic coupling in condensed matter and the Dicke superradiant phase transition in quantum optics are *** presenting a review on an array of THz spin phenomena occurring in a single class of materials,we hope to trigger interdisciplinary efforts that actively seek connections between subfields of spintronics,which will facilitate the invention of new protocols of active spin control and quantum phase engineering.

关键词： terahertz spin dynamics magnetism orthoferrite ultrafast spectroscopy magneto-optics

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