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Corrigendum to "A Gene Module-Based eQTL Analysis Prioritizing Disease Genes and Pathways in Kidney Cancer"

Computational and structural biotechnology journal 2018年 16卷 196页

作者： M Q Yang D Li W Yang Y Zhang J Liu W Tong Joint Bioinformatics Graduate Program Department of Information Science George W. Donaghey College of Engineering and Information Technology University of Arkansas at Little Rock USA. University of Arkansas for Medical Sciences 2801 S. University Ave Little Rock AR 72204 USA. School of Computer Science Carnegie Mellon University 5000 Forbes Ave Pittsburgh PA 15213 USA. Department of Statistics Harvard University Cambridge MA 02138 USA. Divisions of Bioinformatics and Biostatistics National Center for Toxicological Research US Food and Drug Administration 3900 NCTR Road Jefferson AR 72079 USA.

[This corrects the article DOI: 10.1016/***.2017.09.003.].

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Training of Physical Neural Networks

arXiv

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arXiv 2024年

作者： Momeni, Ali Rahmani, Babak Scellier, Benjamin Wright, Logan G. McMahon, Peter L. Wanjura, Clara C. Li, Yuhang Skalli, Anas Berloff, Natalia G. Onodera, Tatsuhiro Oguz, Ilker Morichetti, Francesco del Hougne, Philipp Le Gallo, Manuel Sebastian, Abu Mirhoseini, Azalia Zhang, Cheng Marković, Danijela Brunner, Daniel Moser, Christophe Gigan, Sylvain Marquardt, Florian Ozcan, Aydogan Grollier, Julie Liu, Andrea J. Psaltis, Demetri Alù, Andrea Fleury, Romain Lausanne Switzerland Microsoft Research 198 Cambridge Science Park CambridgeCB4 0AB United Kingdom Rain AI San Francisco United States Department of Applied Physics Yale University CT United States School of Applied and Engineering Physics Cornell University IthacaNY14853 United States Max Planck Institute for the Science of Light Staudtstraße 2 Erlangen91058 Germany Department of Electrical and Computer Engineering University of California Los AngelesCA90095 United States FEMTO-ST Institute Optics Department CNRS University Bourgogne Franche-Comté Besançon25030 Cedex France Department of Applied Mathematics and Theoretical Physics University of Cambridge Cambridge United Kingdom NTT Physics and Informatics Laboratories NTT Research Inc. Sunnyvale United States Lausanne Switzerland Dipartimento di Elettronica Informazione e Bioingegneria Politecnico di Milano Milan Italy Univ Rennes CNRS IETR UMR 6164 RennesF-35000 France IBM Research Europe– Zurich Rüschlikon8803 Switzerland Department of Computer Science Stanford University United States Google DeepMind 1600 Amphitheatre Parkway Mountain ViewCA94043 United States Unité Mixte de Physique CNRS/Thales CNRS Thales Université Paris-Saclay Palaiseau France Laboratoire Kastler Brossel Sorbonne Université École Normale Supérieure Collège de France CNRS UMR 8552 Paris France Laboratoire Albert Fert CNRS Thales UniversitéParis-Saclay Palaiseau91767 France Department of Physics and Astronomy University of Pennsylvania PhiladelphiaPA19104 United States Lausanne Switzerland Photonics Initiative Advanced Science Research Center City University of New York New YorkNY10031 United States Physics Program Graduate Center City University of New York New YorkNY10016 United States

Physical neural networks (PNNs) are a class of neural-like networks that leverage the properties of physical systems to perform computation. While PNNs are so far a niche research area with small-scale laboratory demonstrations, they are arguably one of the most underappreciated important opportunities in modern artificial intelligence (AI). Could we train AI models 1000x larger than current ones? Could we do this and also have them perform inference locally and privately on edge devices, such as smartphones or sensors? Research over the past few years has shown that the answer to all these questions is likely "textityes, with enough research": PNNs could one day radically change what is possible and practical for AI systems. To do this will however require rethinking both how AI models work, and how they are trained – primarily by considering the problems through the constraints of the underlying hardware physics. To train PNNs at large scale, many methods including backpropagation-based and backpropagation-free approaches are now being explored. These methods have various trade-offs, and so far no method has been shown to scale to the same scale and performance as the backpropagation algorithm widely used in deep learning today. However, this is rapidly changing, and a diverse ecosystem of training techniques provides clues for how PNNs may one day be utilized to create both more efficient realizations of current-scale AI models, and to enable unprecedented-scale models. Copyright © 2024, The Authors. All rights reserved.

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OpenMM 8: Molecular Dynamics Simulation with Machine Learning Potentials

arXiv

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arXiv 2023年

作者： Eastman, Peter Galvelis, Raimondas Peláez, Raúl P. Abreu, Charlles R.A. Farr, Stephen E. Gallicchio, Emilio Gorenko, Anton Henry, Michael M. Hu, Frank Huang, Jing Krämer, Andreas Michel, Julien Mitchell, Joshua A. Pande, Vijay S. Rodrigues, João P.G.L.M. Rodriguez-Guerra, Jaime Simmonett, Andrew C. Singh, Sukrit Swails, Jason Turner, Philip Wang, Yuanqing Zhang, Ivy Chodera, John D. De Fabritiis, Gianni Markland, Thomas E. Department of Chemistry Stanford University StanfordCA94305 United States Acellera Labs C Dr Trueta 183 Barcelona08005 Spain C Dr. Aiguader 88 Barcelona08003 Spain Chemical Engineering Department School of Chemistry Federal University of Rio de Janeiro Rio de Janeiro68542 Brazil Redesign Science Inc. 180 Varick St. New YorkNY10014 United States EaStCHEM School of Chemistry University of Edinburgh EH9 3FJ United Kingdom Department of Chemistry and Biochemistry Brooklyn College The City University of New York NY United States Ph.D. Program in Chemistry Ph.D. Program in Biochemistry The Graduate Center of the City University of New York New YorkNY United States Stream HPC Koningin Wilhelminaplein 1 - 40601 Amsterdam1062 HG Netherlands Computational and Systems Biology Program Sloan Kettering Institute Memorial Sloan Kettering Cancer Center New YorkNY10065 United States Key Laboratory of Structural Biology of Zhejiang Province School of Life Sciences Westlake University 18 Shilongshan Road Zhejiang Hangzhou310024 China Department of Mathematics and Computer Science Freie Universität Berlin Arnimallee 12 Berlin14195 Germany The Open Force Field Initiative Open Molecular Software Foundation DavisCA95616 United States Andreessen Horowitz 2865 Sand Hill Rd Menlo ParkCA94025 United States Department of Structural Biology Stanford University StanfordCA94305 United States Charité Universitätsmedizin Berlin In silico Toxicology and Structural Bioinformatics Virchowweg 6 Berlin10117 Germany Laboratory of Computational Biology National Heart Lung and Blood Institute National Institutes of Health BethesdaMD20892 United States Entos Inc. 9310 Athena Circle La Jolla CA92037 United States College of Engineering Virginia Polytechnic Institute State University BlacksburgVA24061 United States Simons Center for Computational Physical Chemistry Center for Data Science New York University 24 Waverly Place New YorkNY10004 United States T

Machine learning plays an important and growing role in molecular simulation. The newest version of the OpenMM molecular dynamics toolkit introduces new features to support the use of machine learning potentials. Arbitrary PyTorch models can be added to a simulation and used to compute forces and energy. A higher-level interface allows users to easily model their molecules of interest with general purpose, pretrained potential functions. A collection of optimized CUDA kernels and custom PyTorch operations greatly improves the speed of simulations. We demonstrate these features on simulations of cyclin-dependent kinase 8 (CDK8) and the green fluorescent protein (GFP) chromophore in water. Taken together, these features make it practical to use machine learning to improve the accuracy of simulations at only a modest increase in cost. Copyright © 2023, The Authors. All rights reserved.

关键词： Machine learning

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Author Correction: The high-dimensional space of human diseases built from diagnosis records and mapped to genetic loci

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Nature computational science 2023年第7期3卷 658页

作者： Gengjie Jia Yu Li Xue Zhong Kanix Wang Milton Pividori Rabab Alomairy Aniello Esposito Hatem Ltaief Chikashi Terao Masato Akiyama Koichi Matsuda David E Keyes Hae Kyung Im Takashi Gojobori Yoichiro Kamatani Michiaki Kubo Nancy J Cox James Evans Xin Gao Andrey Rzhetsky Shenzhen Branch Guangdong Laboratory of Lingnan Modern Agriculture Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs Agricultural Genomics Institute at Shenzhen Chinese Academy of Agricultural Sciences Shenzhen China. jiagengjie@***. Computational Bioscience Research Center King Abdullah University of Science and Technology Thuwal Saudi Arabia. Computer Science Program Computer Electrical and Mathematical Sciences and Engineering Division King Abdullah University of Science and Technology Thuwal Saudi Arabia. Department of Computer Science and Engineering The Chinese University of Hong Kong Hong Kong People's Republic of China. Department of Medicine and Vanderbilt Genetics Institute Vanderbilt University Medical Center Nashville TN US. Department of Medicine Institute of Genomics and Systems Biology Committee on Genomics Genetics and Systems Biology University of Chicago Chicago IL US. Department of Operations Business Analytics and Information Systems University of Cincinnati Cincinnati OH US. Department of Systems Pharmacology and Translational Therapeutics Perelman School of Medicine University of Pennsylvania Philadelphia PA US. Extreme Computing Research Center Computer Electrical and Mathematical Sciences and Engineering Division King Abdullah University of Science and Technology Thuwal Saudi Arabia. College of Computer Science and Engineering University of Jeddah Jeddah Saudi Arabia. HPE HPC/AI EMEA Research Laboratory Bristol UK. RIKEN Center for Integrative Medical Sciences Yokohama Japan. Clinical Research Center Shizuoka General Hospital Shizuoka Japan. Department of Applied Genetics The School of Pharmaceutical Sciences University of Shizuoka Shizuoka Japan. Department of Ophthalmology Graduate School of Medical Sciences Kyushu University Fukuoka Japan. Department of Computational Biology and Medical Sciences Graduate School of Frontier Sciences The University of Tokyo Tokyo Japan. Biological and Environmenta

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The Biodiversity of Flora and Fauna in the Re-vegetation Area in The Post-Mining Area of Pongkor

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IOP Conference Series: Earth and Environmental science 2020年第1期501卷

作者： A Kusumoarto A Gunawan Machfud A Hikmat Doctoral Student Program Natural Resource and Environmental Management Science School of Post-Graduate IPB University Jl. Raya Pajajaran Bogor Indonesia 16143 Lecturer in Architecture Study Program Faculty of Technic and Computer Science Indraprasta PGRI University Jl. Raya Nangka No. 58C RT.5/RW.5 Tanjung Barat Kecamatan Jagakarsa Kota Jakarta Selatan Daerah Khusus Ibukota Jakarta 12530 Lecturer in Landscape Architecture Department IPB University Jl. Raya Darmaga Bogor Indonesia 16680 Lecturer in AgroIndustrial Technology Department IPB University Jl.Raya Darmaga Bogor Indonesia 16680 Lecturer in Conservation of Forest and Ecotourism Department IPB University Jl. Raya Darmaga Bogor Indonesia 16680

The Pongkor post-mining area is designated as one of the ecotourism areas in Bogor. This area has biodiversity of flora and fauna. This study aims to: (1) analysis the importance value index (IVI) of flora types; (2) analysis species richness index, species diversity index, and relative species abundance index; (3) analysis the beauty, the uniqueness and the rarity of the flora and fauna types. The method used in this research is quantitative descriptive. Based on the identification results, 185 species of flora are distributed in this region. During the rainy season, 15 species of herpetofauna were identified, 32 types of aves, and 4 types of mammals, while in the dry season 19 species of herpetofauna were identified, 23 types of aves, and 2 types of mammals. Based on the results of the analysis conducted on these flora and fauna, there are flora species that have high IVI values and some beautiful and unique flora species that are in the category of endangered species. Besides that, there are also fauna species which have a value of species richness index, species diversity index, and relative species abundance index, as well as some beautiful, unique, and fauna species that are in the category of endangered species.

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Euclid: Early Release Observations – A preview of the Euclid era through a galaxy cluster magnifying lens

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Astronomy and Astrophysics 2025年 697卷

作者： Atek, H. Gavazzi, R. Weaver, J.R. Diego, J.M. Schrabback, T. Hatch, N.A. Aghanim, N. Dole, H. Hartley, W.G. Taamoli, S. Congedo, G. Jimenez-Teja, Y. Cuillandre, J.-C. Bañados, E. Belladitta, S. Bowler, R.A.A. Franco, M. Jauzac, M. Mahler, G. Richard, J. Rocci, P.-F. Serjeant, S. Toft, S. Abriola, D. Bergamini, P. Biviano, A. Dimauro, P. Ezziati, M. Golden-Marx, J.B. Grillo, C. Hughes, A.C.N. Kang, Y. Kneib, J.-P. Lombardi, M. Mamon, G.A. McPartland, C.J.R. Meneghetti, M. Miyatake, H. Montes, M. Mortlock, D.J. Oesch, P.A. Okabe, N. Rosati, P. Taylor, A.N. Tarsitano, F. Weller, J. Kluge, M. Laureijs, R. Paltani, S. Saifollahi, T. Schirmer, M. Stone, C. Mora, A. Altieri, B. Amara, A. Andreon, S. Auricchio, N. Baldi, M. Balestra, A. Bardelli, S. Basset, A. Bender, R. Bodendorf, C. Bonino, D. Branchini, E. Brescia, M. Brinchmann, J. Camera, S. Candini, G.P. Capobianco, V. Carbone, C. Cardone, V.F. Carretero, J. Casas, S. Castander, F.J. Castellano, M. Cavuoti, S. Cimatti, A. Conselice, C.J. Conversi, L. Copin, Y. Corcione, L. Courbin, F. Courtois, H.M. Da Silva, A. Degaudenzi, H. Di Giorgio, A.M. Dinis, J. Douspis, M. Dubath, F. Dupac, X. Dusini, S. Ealet, A. Farina, M. Farrens, S. Ferriol, S. Fotopoulou, S. Frailis, M. Franceschi, E. Galeotta, S. Gillard, W. Gillis, B. Giocoli, C. Gómez-Alvarez, P. Grazian, A. Grupp, F. Guzzo, L. Hailey, M. Haugan, S.V.H. Hoar, J. Hoekstra, H. Holliman, M.S. Institut d’Astrophysique de Paris UMR 7095 CNRS Sorbonne Université 98 bis boulevard Arago Paris75014 France Aix-Marseille Université CNRS CNES LAM Marseille France Department of Astronomy University of Massachusetts AmherstMA01003 United States Instituto de Física de Cantabria Edificio Juan Jordá Avenida de los Castros Santander39005 Spain Universität Innsbruck Institut für Astro- und Teilchenphysik Technikerstr. 25/8 Innsbruck6020 Austria School of Physics and Astronomy University of Nottingham University Park NottinghamNG7 2RD United Kingdom Université Paris-Saclay CNRS Institut d’astrophysique spatiale Orsay91405 France Department of Astronomy University of Geneva ch. d’Ecogia 16 Versoix1290 Switzerland Physics and Astronomy Department University of California 900 University Ave. RiversideCA92521 United States Institute for Astronomy University of Edinburgh Royal Observatory Blackford Hill EdinburghEH9 3HJ United Kingdom Instituto de Astrofísica de Andalucía CSIC Glorieta de la Astronomía Granada18080 Spain Observatorio Nacional Rua General Jose Cristino 77-Bairro Imperial de Sao Cristovao Rio de Janeiro20921-400 Brazil Université Paris-Saclay Université Paris Cité CEA CNRS AIM Gif-sur-Yvette91191 France Max-Planck-Institut für Astronomie Königstuhl 17 Heidelberg69117 Germany INAF-Osservatorio di Astrofisica e Scienza dello Spazio di Bologna Via Piero Gobetti 93/3 Bologna40129 Italy Jodrell Bank Centre for Astrophysics Department of Physics and Astronomy University of Manchester Oxford Road ManchesterM13 9PL United Kingdom The University of Texas at Austin AustinTX78712 United States Department of Physics Centre for Extragalactic Astronomy Durham University South Road DH1 3LE United Kingdom Department of Physics Institute for Computational Cosmology Durham University South Road DH1 3LE United Kingdom Astrophysics Research Centre University of KwaZulu-Natal Westville Campus Durban4041 South Africa School of

We present the first analysis of the Euclid Early Release Observations (ERO) program that targets fields around two lensing clusters, Abell 2390 and Abell 2764. We use imaging data from the Visible instrument (VIS) and the Near-Infrared Spectrometer and Photometer (NISP) to produce photometric catalogs for a total of ∼500 000 objects. The imaging data reach a typical depth of 5 σ in the range 25.1–25.4 AB in the NISP bands and 27.1–27.3 AB in the VIS band. Using the Lyman-break method in combination with photometric redshifts, we searched for high-redshift galaxies. We identified 30 Lyman-break galaxy (LBG) candidates at z > 6 and 139 extremely red sources (ERSs), most of which likely lie at lower redshift. The VIS imaging is deeper than the NISP imaging, which means that we can routinely identify high-redshift Lyman-break galaxies at about a magnitude of 3, which reduces contamination by brown dwarf stars and low-redshift galaxies. The difficulty of spatially resolving most of these sources in 0′′ . 3 pix−1 imaging means that it is difficult to distinguish between galaxies and quasars. Spectroscopic follow-up campaigns of these bright sources will help us to constrain the bright end of the ultraviolet galaxy luminosity function and the quasar luminosity function at z > 6, and it will constrain the physical nature of these objects. Additionally, we performed a combined strong- and weak-lensing analysis of A2390, and we show that Euclid will contribute to constraining the virial mass of galaxy clusters better. We also identify optical and near-infrared counterparts of known z > 0.6 clusters in these data. These counterparts exhibit strong-lensing features. This establishes that Euclid can characterize high-redshift clusters. Finally, we provide a glimpse of the ability of Euclid to map the intracluster light out to larger radii than current facilities, which enables us to understand the cluster assembly history better and to map the dark matter distribution. This ini

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Out on the Land: Income, Subsistence Activities, and Food Sharing Networks in Nain, Labrador

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Journal of Anthropology 2013年第1期2013卷

作者： Kirk Dombrowski Emily Channell Bilal Khan Joshua Moses Evan Misshula Department of Anthropology John Jay College City University of New York 524 West 59th Street New York NY 10019 USAcuny.edu Doctoral Program in Anthropology CUNY Graduate Center 365 5th Avenue New York NY 10016 USAcuny.edu Department of Mathematics and Computer Science John Jay College City University of New York 524 West 59th Street New York NY 10019 USAcuny.edu Culture and Mental Health Research Unit 4333 Chemin de la Cote Ste-Catherine Montreal QC Canada H3T 1E4 Doctoral Program in Criminal Justice CUNY Graduate Center 365 5th Avenue New York NY 10016 USAcuny.edu

In recent Inuit ethnography, a major concern has been how and to what extent contemporary Inuit participate in and depend on subsistence activities, particularly in the context of increasing wage employment and growing participation in the cash economy. This paper provides an analysis of these activities in the predominately Inuit community of Nain, Labrador. Using social network data and demographic information collected between January and June 2010, we examine the interconnections between subsistence activities—obtaining “country food” through activities such as hunting, fishing, and collecting—with access to the means of obtaining subsistence resources (such as snow mobiles, cabins, and boats), employment status, and income. Our data indicate that individuals with higher employment status and income tend to be more central to the network of subsistence food sharing, but not because they have greater access to hunting tools or equipment (they do not). We conclude that those individuals who play the most central role in the network are those who are financially able to do so, regardless of access to hunting tools/means.

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AN EVALUATION OF THE SEAKEEPING QUALITIES OF NAVAL COMBATANTS

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Naval Engineers Journal 1978年第1期90卷 23-40页

作者： OLSON, STEPHEN R. USN The Author received his BS degree in Naval Science upon graduation from the U.S. Naval Academy in 1967 and his MS degree in Operations Research from the U. S. Naval Postgraduate School Monterey Calij. in 1975. He is a qualified Suflace Warfare Oflcer and has sewed as the Electronics Maintenance Ofleer and CIC Oflcer in the USS Shelton (DO-790) and as Operations Officer in the USS John R. Craig (DD-885). He was a member of the Precommissioning Crew and Chief Engineer in the USS Flint (AE-32) from commissioning through her maiden deployment to the Western Pacific. While attending Postgraduate School he spent jbur months with the CVN Program Manager's Office (PMS-392) and the Patrol Frigate Pmgram Manager's Office (PMS-399). His graduate thesis was entitled “A Computer Model to Assess Financing Provisions of Naval FPIF Shipbuilding Contracts.” The seakeeping analysis reported hereaper was undertaken while the Author was assigned as a Systems Analyst at the Center jbr Naval Analyses. Currently he is assigned as a Special Project OfJicer jbr the Naval Personnel Program Support Activity. LCdr. Olson's military decorations include the Navy Commendation Medal and the Navy Achievement Medal with 2 Stars in lieu of second award.

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MetaMOPE: a web service for mobile phase determination and fast chromatography peaks evaluation for metabolomics

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Bioinformatics Advances 2023年第1期3卷

作者： Tsai, Dong-Ming Chang, Ching-Yao Lin, Shih-Ming Kuo, Tien-Chueh Wang, San-Yuan Chen, Guan-Yuan Kuo, Ching-Hua Tseng, Yufeng Jane Graduate Institute of Biomedical Electronics and Bioinformatics National Taiwan University Taipei 106216 Taiwan The Metabolomics Core Laboratory Centers of Genomic and Precision Medicine National Taiwan University Taipei 100225 Taiwan Department of Computer Science and Information Engineering National Taiwan University Taipei 106216 Taiwan Master Program for Clinical Pharmacogenomics and Pharmacoproteomics School of Pharmacy Taipei Medical University Taipei 110301 Taiwan Forensic Medicine College of Medicine National Taiwan University Taipei 100225 Taiwan School of Pharmacy College of Medicine National Taiwan University Taipei 100225 Taiwan

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Ten quick tips for deep learning in biology

arXiv

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arXiv 2021年

作者： Lee, Benjamin D. Gitter, Anthony Greene, Casey S. Raschka, Sebastian Maguire, Finlay Titus, Alexander J. Kessler, Michael D. Lee, Alexandra J. Chevrette, Marc G. Stewart, Paul Allen Britto-Borges, Thiago Cofer, Evan M. Yu, Kun-Hsing Carmona, Juan Jose Fertig, Elana J. Kalinin, Alexandr A. Signal, Beth Lengerich, Benjamin J. Triche, Timothy J. Boca, Simina M. In-Q-Tel Labs School of Engineering and Applied Sciences Harvard University Department of Genetics Harvard Medical School United States Department of Biostatistics and Medical Informatics University of Wisconsin-Madison MadisonWI United States Morgridge Institute for Research MadisonWI United States Department of Systems Pharmacology and Translational Therapeutics Perelman School of Medicine University of Pennsylvania PhiladelphiaPA United States Department of Biochemistry and Molecular Genetics University of Colorado School of Medicine AuroraCO United States Center for Health AI University of Colorado School of Medicine AuroraCO United States Department of Statistics University of Wisconsin Madison United States Faculty of Computer Science Dalhousie University Canada University of New Hampshire Bioeconomy.XYZ United States Department of Oncology Johns Hopkins University United States Institute for Genome Sciences University of Maryland School of Medicine United States Genomics and Computational Biology Graduate Program University of Pennsylvania United States Department of Systems Pharmacology and Translational Therapeutics University of Pennsylvania United States Wisconsin Institute for Discovery Department of Plant Pathology University of Wisconsin-Madison United States Department of Biostatistics and Bioinformatics Moffitt Cancer Center TampaFL United States Section of Bioinformatics and Systems Cardiology Klaus Tschira Institute for Integrative Computational Cardiology University Hospital Heidelberg Germany University Hospital Heidelberg Germany Lewis-Sigler Institute for Integrative Genomics Princeton University PrincetonNJ United States Graduate Program in Quantitative and Computational Biology Princeton University PrincetonNJ United States Department of Biomedical Informatics Harvard Medical School United States Department of Pathology Brigham and Women's Hospital United States Philips Healthcare CambridgeMA United States Philips Research

Machine learning is a modern approach to problem-solving and task automation. In particular, machine learning is concerned with the development and applications of algorithms that can recognize patterns in data and use them for predictive modeling. Artificial neural networks are a particular class of machine learning algorithms and models that evolved into what is now described as deep learning. Given the computational advances made in the last decade, deep learning can now be applied to massive data sets and in innumerable contexts. Therefore, deep learning has become its own subfield of machine learning. In the context of biological research, it has been increasingly used to derive novel insights from high-dimensional biological data. To make the biological applications of deep learning more accessible to scientists who have some experience with machine learning, we solicited input from a community of researchers with varied biological and deep learning interests. These individuals collaboratively contributed to this manuscript's writing using the GitHub version control platform and the Manubot manuscript generation toolset. The goal was to articulate a practical, accessible, and concise set of guidelines and suggestions to follow when using deep learning. In the course of our discussions, several themes became clear: the importance of understanding and applying machine learning fundamentals as a baseline for utilizing deep learning, the necessity for extensive model comparisons with careful evaluation, and the need for critical thought in interpreting results generated by deep learning, among others. © 2021, CC BY.

关键词： Learning algorithms

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