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Domain Adaptation in Color-Shifted Datasets Through Adversarial Learning Balancing 4

Domain Adaptation in Color-Shifted Datasets Through Adversar...

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4th International Conference on Artificial Intelligence and Data sciences, AiDAS 2023

作者： Hidayaturrahman Trisetyarso, Agung Kartowisastro, Iman Herwidiana Budiharto, Widodo School of Computer Science Bina Nusatara University Mathematics Department Jakarta11480 Indonesia Bina Nusatara University Binus Graduate Program-Doctor of Computer Science Computer Science Department Jakarta11480 Indonesia Bina Nusantara University Faculty of Engineering Computer Engineering Department Jakarta11480 Indonesia School of Computer Science Bina Nusantara University Computer Science Department Jakarta11480 Indonesia

ISBN: (纸本)9798350318432

Due to the disparity in the levels of difficulty presented by the several tasks, doing domain adaptation in an adversarial way may result in an imbalanced learning process. In the MNIST dataset, this phenomenon also manifests itself in the form of domain adaptation for color-shifted distribution. In this particular situation, the domain classifier has a higher tendency to fit more quickly, but the category classifier fits quite poorly in the learning process. In order to address this problem, a new hyper-parameter has been added to the loss function in order to strike a compromise between the learning speed of the domain and the categorical classifier. By using this technique, the categorical classifier may better match the data while still maintaining the same level of performance as the domain classifier. In order to determine whether or not making use of this hyper-parameter is useful, the phenomena in question is examined using three distinct color-shifted settings. Following the evaluations, it was discovered that the newly introduced hyper-parameter is capable of coping with imbalanced learning while simultaneously engaging in domain adaptation. © 2023 IEEE.

关键词： Color

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Utilizing Semi-supervised Method in Predicting BRCA1 Pathogenicity Variants 8

Utilizing Semi-supervised Method in Predicting BRCA1 Pathoge...

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8th International Conference on computer science and Computational Intelligence, ICCSCI 2023

作者： Hidayat, Alam Ahmad Trinugroho, Joko Pebrianto Nirwantono, Rudi Sudigyo, Digdo Pardamean, Bens Department of Mathematics School of Computer Science Bina Nusantara University 11480 Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta11480 Indonesia Computer Science Department BINUS Graduate Program Bina Nusantara University Jakarta11480 Indonesia

Quantifying the effect of mutations in the BRCA1 gene is useful for understanding their clinical consequences on breast cancer. Machine learning models can be applied to predict the landscape of protein variant effects that might not be always accessible by experiments. In this work, we propose a simple semi-supervised learning method using a Gaussian mixture model to predict ~90% of the unlabeled missense variants of the BRCA1 gene collected from the ClinVar database. High-quality embeddings are used as a feature of the protein sequences, extracted using the latest pre-trained transformer-based language protein model. A statistical test show that the protein embeddings are effective and robust for predicting pathogenicity. Further, the lower representations of the features are then fed into the semi-supervised model. The prediction performance of the model only for the labeled testing data achieves an AUC score and an accuracy of 79.27% and 71.58%, respectively. Using our defined pathogenic probability score, we find that ~94% of variants in our unlabeled dataset are well-separated into either benign or pathogenic classes according to that scoring. Our scores obtain a moderate Spearman rank correlation with the results of established unsupervised variant effect models. Finally, our approach can potentially be developed for more accurate and biologically reliable predictions of the variant effects. © 2023 The Authors. Published by Elsevier B.V.

关键词： embeddings language model mutation effect protein sequence semi-supervised learning

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Disaster recovery plan implementation evaluation model at the corporation 7

Disaster recovery plan implementation evaluation model at th...

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7th Information Systems International Conference, ISICO 2023

作者： Sardjono, Wahyu Perdana, Widhilaga Gia Putra, Gustian Rama Information Systems Management Department BINUS Graduate Program - Master of Information Systems Management Bina Nusantara University Jakarta11480 Indonesia Post Graduate Program of Management Science State University of Jakarta Jl. R.Mangun Muka Raya No.11 Jakarta Timur Jakarta13220 Indonesia Computer Science Study Program Faculty of Mathematics & Natural Sciences Pakuan University Bogor Indonesia

The application of information technology in addition to making internal business processes more effective and efficient, is also to improve customer service. This role is important for companies to maintain the sustainability of information systems as a strategic tool for competitive advantage so system availability is absolutely essential. Research related to the Disaster Recovery Plan (DRP) needs to be carried out to see the readiness of a corporation to build a backup system in different places and locations. By using the method of factor analysis and regression analysis to form an evaluation model, it will obtain an overview of what factors must be considered and what the current conditions are. The results of the study show that there are Core Technical DRP, Organizational Preparation, and Costing factors which are the main variables in supporting DRP readiness. The conclusion from this study, through these three new factors a mathematical model can be built as a reference for improving DRP implementation in corporations. © 2023 The Authors. Published by Elsevier B.V.

关键词： Factor analysis

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Faster Groebner bases for Lie derivatives of ODE systems via monomial orderings 49

Faster Groebner bases for Lie derivatives of ODE systems via...

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49th International Symposium on Symbolic and Algebraic Computation, ISSAC 2024

作者： Bessonov, Mariya Ilmer, Ilia Konstantinova, Tatiana Ovchinnikov, Alexey Pogudin, Gleb Soto, Pedro Department of Mathematics Cuny Nyc College of Technology New YorkNY United States Ph.D. Program in Computer Science Cuny Graduate Center New YorkNY United States Department of Mathematics Cuny Queens College New YorkNY United States Department of Mathematics Cuny Queens College United States Ph.D. Programs in Mathematics and Computer Science Cuny Graduate Center New YorkNY United States Lix Cnrs École Polytechnique Institute Polytechnique de Paris Paris France

ISBN: (纸本)9798400706967

Symbolic computation for systems of differential equations is often computationally expensive. Many practical differential models have a form of polynomial or rational ODE system with specified outputs. A basic symbolic approach to analyze these models is to compute and then symbolically process the polynomial system obtained by sufficiently many Lie derivatives of the output functions with respect to the vector field given by the ODE system. In this paper, we present a method for speeding up Gröbner basis computation for such a class of polynomial systems by using specific monomial ordering, including weights for the variables, coming from the structure of the ODE model. We provide empirical results that show improvement across different symbolic computing frameworks and apply the method to speed up structural identifiability analysis of ODE models. © 2024 ACM.

关键词： Polynomials

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The Classification Model of Learners Based on Diagnostic Assessment Results in E-learning With Machine Learning 1

The Classification Model of Learners Based on Diagnostic Ass...

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1st International Conference on Software Engineering and Information Technology, ICoSEIT 2022

作者： Yel, Mesra Betty Zarlis, Muhammad Suwilo, Saib Efendi, Syahril Sihombing, Poltak Universitas Sumatera Utara Graduate Program of Computer Science Department of Computer Science Medan Indonesia Universitas Binus Department of Computer Science Jakarta Indonesia Universitas Sumatera Utara Department of Mathematics Medan Indonesia

ISBN: (纸本)9781665473033

The development of technology and artificial intelligence, especially in the era of Industrial Revolution 4.0 almost covers all fields, one of which is e-learning. In its development, it is very important to determine the factors to produce the quality of e-learning. Machine learning can help to find various solutions in the real world, especially to solve problems for which a specific algorithm has not been found. The implementation of e-learning is often ineffective and not on target which has an impact on learning achievement that is not achieved, this is due to several things namely the learning model is applied in general, the learning materials and weights are applied equally to all users. Seeing these problems, it is necessary to have a model to classify students according to their abilities, talents, and interests before starting learning to achieve their goals to be achieved. This paper aims to create a machine learning approach model to determine the level of ability and needs of students before starting learning which can reduce disparities between students and follow up learning materials. With the machine learning based on learning model, e-learning can provide teaching materials according to the abilities, and interests of students, sustainably and improve the quality of students. © 2022 IEEE.

关键词： Students

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Machine Learning Approach for Single Nucleotide Polymorphism Selection in Genetic Testing Results 8

Machine Learning Approach for Single Nucleotide Polymorphism...

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8th International Conference on computer science and Computational Intelligence, ICCSCI 2023

作者： Trinugroho, Joko Pebrianto Hidayat, Alam Ahmad Isnan, Mahmud Pardamean, Bens Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta11480 Indonesia Department of Mathematics School of Computer Science Bina Nusantara University Jakarta11480 Indonesia Computer Science Department BINUS Graduate Program Bina Nusantara University Jakarta11480 Indonesia

Lactose intolerance is a type of digestive problem that may threaten the population because milk and dairy products compose of nutrients that are essential for human body. Genetic tests possess a great potential to detect lactose intolerance as it can be used in children and even infants. However, a new approach to analyze the genetic test results is needed to elucidate the Single Nucleotide Polymorphisms (SNPs) that are related to lactose intolerance. In this work, we utilized the machine learning based feature selection to select the SNPs associated with lactose tolerance trait from genotyping samples of direct-to-customer (DTCG genetic tests, obtained from the public database. Recursive Feature Elimination (RFE) with XGBoost model was used to perform feature selection. We also compared three different models, such as XGBoost, support vector machine (SVM), and random forest (RF) for training the selected features. Our findings revealed that 20 SNPs (out of 3501) were chosen, with rs4394668 as the most important variables (F-score 0.009). Furthermore, when compared to the RF and SVM models, the XGBoost model had the highest accuracy (0.87). Further studies should be undertaken to elucidate how the selected SNPs may lead to the lactose intolerance trait. © 2023 The Authors. Published by Elsevier B.V.

关键词： feature selection genetic test lactose intolerance SNP

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An Exploratory Computational Approach for Elucidating a Nonstructural Protein Interaction in Dengue Virus 2 9th

An Exploratory Computational Approach for Elucidating a Nons...

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9th International Conference on computer science and Computational Intelligence, ICCSCI 2024

作者： Hidayat, Alam Ahmad Nirwantono, Rudi Pardamean, Bens Mathematics Department School of Computer Science Bina Nusantara University 11480 Indonesia Biotechnology Department Faculty of Engineering Bina Nusantara University 11480 Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta11480 Indonesia Computer Science Department BINUS Graduate Program Bina Nusantara University Jakarta11480 Indonesia

As the dengue infection still impacts hundreds of millions of people globally, unprecedented efforts in dengue drug development have been more progressive in recent decades. Computational methods provide a fast, sustainable, and efficient screening of active compounds and newly created drug molecules, including those specifically targeting nonstructural proteins (NS) of dengue viruses. In this work, protein modeling for the NS proteins of DENV-2/16681 strain was performed using a template-based homology modeling for the NS3 protein and an Artificial Intelligence (AI)-based prediction via AlphaFold for the NS4B protein. Moreover, the protein-protein interaction between the two structures was predicted using the HADDOCK server, which employs information about active and passive residues of the interaction interface to guide the docking process. After the modeling and its respective refinement process, the predicted structures of NS3 and NS4B improved their steric clashing scoring from MolProbity assessment. The refined models were then docked, and the resulting docking pose was analyzed to extract the interacting residues based on the polar contacts within the interface of the two proteins. Our result presents a preliminary study to create a dataset related to in silico molecular interactions of the NS3-NS4B interaction of different DENV types. It is helpful for building a computational pipeline for elucidating protein-ligand problems in dengue drug screenings. © 2024 The Authors.

关键词： Molecular docking

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Multivariate Time-Series Deep Learning for Joint Prediction of Temperature and Relative Humidity in a Closed Space 8

Multivariate Time-Series Deep Learning for Joint Prediction ...

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8th International Conference on computer science and Computational Intelligence, ICCSCI 2023

作者： Gunawan, Fergianto E. Budiman, Arief S. Pardamean, Bens Juana, Endang Romeli, Sugiarto Cenggoro, Tjeng W. Purwandari, Kartika Hidayat, Alam A. Redi, Anak A.N.P. Asrol, Muhammad Industrial Engineering Department BINUS Graduate Program - Master of Industrial Engineering Bina Nusantara University Jakarta11480 Indonesia Computer Science Department BINUS Graduate Program - Master of Computer Science Program Bina Nusantara University Jakarta11480 Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta11480 Indonesia Electrical Engineering Department Faculty of Industrial Technology Universitas Trisakti Jakarta11440 Indonesia PT Impack Pratama Industri Jakarta14350 Indonesia Computer Science Department School of Computer Science Bina Nusantara University Jakarta11480 Indonesia Mathematics Department School of Computer Science Bina Nusantara University Jakarta11480 Indonesia

An accurate predictive model of temperature and humidity plays a vital role in many industrial processes that utilize a closed space such as in agriculture and building management. With the exceptional performance of deep learning on time-series data, developing a predictive temperature and humidity model with deep learning is propitious. In this study, we demonstrated that deep learning models with multivariate time-series data produce remarkable performance for temperature and relative humidity prediction in a closed space. In detail, all deep learning models that we developed in this study achieve almost perfect performance with an R value over 0.99. © 2023 The Authors. Published by Elsevier B.V.

关键词： closed space deep learning humity prediction indoor temperature prediction

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Critical Factors of Disruptive Innovation: A Review

Critical Factors of Disruptive Innovation: A Review

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International Conference on computer Applications and Industrial Electronics (ICCAIE)

作者： Yoga Prihastomo Harjanto Prabowo Agung Trisetyarso Haryono Soeparno Computer Science Department - BINUS Graduate Program - Doctor of Computer Science Bina Nusantara University Jakarta Indonesia Computer Science Department - Department of Mathematics Bina Nusantara University Jakarta Indonesia

ISBN: (数字)9798350348798

ISBN: (纸本)9798350348804

People acknowledge innovation as a critical and central factor in increasing economic output and productivity. The phrase disruptive innovation was first familiarized in 1995 and has evolved into a new phenomenon. It exemplifies how a new entrant in a field can eventually compete with the incumbent. Furthermore, many of them may replace them. The study strives to identify the critical factors underlying disruptive innovations. This study employs a systematic literature review strategy and PRISMA meta-analysis. It refers to various reputable data sources from 2013 to 2022. The study included 5,305 articles, analyzed 183 articles that encountered the criteria, and employed 45 appropriate articles. As a result, it encounters six critical factors to disruptive innovation: demand, technology readiness, regulation, labor, external technology, and capital. The proposed formula encapsulates a Success Score for assessing disruptive innovations, integrating various essential factors contributing to success.

关键词： Productivity Industrial electronics Economics Technological innovation Disruptive innovation Systematics Reviews

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Rapid Monitoring for Flood Inundation Detection-Based Sentinel-1 SAR Image Data and Exposure Assessment in Urban Building Area: Makassar City, Indonesia 3rd

Rapid Monitoring for Flood Inundation Detection-Based Sentin...

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3rd International Conference on Radioscience, Equatorial Atmospheric science and Environment, INCREASE 2023

作者： Sekarjati, Dhanu Hanif, Muhammad Komala, Siffa Anastasya Giofandi, Eggy Arya Putri, Febita Safera Bunga, Brigitta Audrynne Rombe Putklang, Wasana Wilis, Ratna Geoinformatics Department of Computer Science College of Computing Khon Kaen University Khon Kaen Thailand Department of Geophysics and Meteorology Faculty of Mathematics and Natural Science IPB University Bogor Indonesia Graduate Program of Regional Planning Science Faculty of Agriculture IPB University Bogor Indonesia Department of Geography Faculty of Social Science Universitas Negeri Padang Padang Indonesia

ISBN: (纸本)9789819707393

Real-time monitoring remains a challenge in providing accurate information, especially in the case of urban flood inundation disasters. The accuracy of data for disaster risk reduction has a positive impact on reducing the loss of livelihood or the regional economy. Understanding flood levels and their impact on urban areas can be crucial information for flood mitigation and effective urban planning. The research aims to conduct a rapid monitoring investigation for flood inundation detection in Makassar City, Indonesia, using Sentinel-1 SAR image data and assess the exposure of urban building areas to flooding. By identifying flood inundation areas using backscatter values, it was determined that Tamalanrea District exhibits a high density and is prone to flooding as a result of urban expansion. Additionally, Biringkanaya District, which is adjacent to Tamalanrea, was also impacted by the flood. The most severely affected area was found to be Tamalanrea District, with an inundation area covering 73,114 m2. It also recorded the highest extent of built-up area affected by flooding, reaching 29,475 m2. © The Author(s), under exclusive license to Springer Nature Singapore Pte Ltd. 2024.

关键词： Floods

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