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Conference on Lasers and Electro-Optics (CLEO)

作者： Adam C. Overvig Y. Kasahara Andrea Alù Photonics Initiative Advanced Science Research Center City University of New York New York NY USA Department of Electrical and Computer Engineering The University of Texas at Austin Austin TX USA Physics Program Graduate Center of the City University of New York New York NY USA

We theoretically propose and experimentally demonstrate nonlocal metasurfaces rationally designed using symmetry-breaking principles to manipulate the optical wavefront with a geometric phase selective to custom ellip... 详细信息

ISBN: (纸本)9781957171258

关键词： Circular polarization Constructive interference Fano resonance Polarization Polarized light Thermal emission

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Gaussian Mixture Model Implementation for Population Stratification Estimation from Genomics Data

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Procedia computer science 2021年 179卷 202-210页

作者： Arif Budiarto Bharuno Mahesworo Alam Ahmad Hidayat Ika Nurlaila Bens Pardamean Computer Science Department School of Computer Science Bina Nusantara University Jakarta Indonesia 11480 Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia 11480 Information Systems Department BINUS Online Learning Bina Nusantara University Jakarta Indonesia 11480 Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta Indonesia 11480

Genomics study, as opposed to socio-anthropology, has been demonstrated as an excellent tool to picture biological relatedness and disease risk factors. To analyze the data obtained from the study, Genome-wide Association Study (GWAS) has been more than decades known as the mainstay approach., is the most popular approach in analysing genomics data. The confounding variables selection, being that ancestry estimation or population stratification, is substantial to maintain the quality of GWAS. Researchers have developed various methods in extracting the population stratification information from high dimensional genomics data, especially Single Nucleotide Polymorphisms (SNPs) data. In the present study, we proposed an implementation of Principal Component Analysis (PCA)-complemented Gaussian Mixture Model (GMM) as an unsupervised model to estimate population stratification from samples. The results derived from this approach was further compared to that resulted from K-means and from the commonly used ancestry estimation software, fast STRUCTURE. We figured out that our recent improved approach outperformed the two later mentioned as shown by the average cluster and population scores. Furthermore, it was able to generate the probability distribution of each sample across all population, despite its limited quality. These intriguing results worth further investigations with much more comprehensive population coverage and more advanced algorithm.

关键词： Population Stratification Ancestry Estimation Gaussian Mixture Model Genomics SNPs

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CELL-E 2: translating proteins to pictures and back with a bidirectional text-to-image transformer 23

CELL-E 2: translating proteins to pictures and back with a b...

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Proceedings of the 37th International Conference on Neural Information Processing Systems

作者： Emaad Khwaja Yun S. Songt Aaron Agarunov Bo Huang UC Berkeley - UCSF Joint Bioengineering Graduate Program and Computer Science Division UC Berkeley CA Department of Statistics UC Berkeley CA and Computer Science Division UC Berkeley CA Department of Pathology Memorial Sloan Kettering Cancer Center Department of Pharmaceutical Chemistry UCSF San Francisco CA and Department of Biochemistry and Biophysics UCSF San Francisco CA and Chan Zuckerberg Biohub - San Francisco San Francisco CA

We present CELL-E 2, a novel bidirectional transformer that can generate images depicting protein subcellular localization from the amino acid sequences (and vice versa). Protein localization is a challenging problem that requires integrating sequence and image information, which most existing methods ignore. CELL-E 2 extends the work of CELL-E, not only capturing the spatial complexity of protein localization and produce probability estimates of localization atop a nucleus image, but also being able to generate sequences from images, enabling de novo protein design. We train and finetune CELL-E 2 on two large-scale datasets of human proteins. We also demonstrate how to use CELL-E 2 to create hundreds of novel nuclear localization signals (NLS). Results and interactive demos are featured at https://***/CELL-E_2/.

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Journalist system using named entity recognition based on Twitter location extraction

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AIP Conference Proceedings 2023年第1期2691卷

作者： Abba Suganda Girsang Sani Muhamad Isa Raditya Fajar BINUS Graduate Program – Master of Computer Science Bina Nusantara University Jakarta 11480 Indonesia

Interactions that occur on Twitter social media are easier to do and can easily reach all levels of society, as well as conversations tweeted by users. They can easily spread information or issues that are developing. Based on this, the use of conversational data on the Twitter platform can get an overview of issues that are developing and even those that are just being formed from community conversations on this Twitter platform. Still related to previous research, which researched to implement the Twitter social media monitoring system to provide access to additional information for journalists. This study aligns with its predecessors but comes with a richer data collection mechanism, so it can gather more conversations. The difficulty to be answered in this study is the difficulty of journalist determining a bunch of location of an incident on a Twitter conversation, which describes the name of a place or contains the address of a location in it. Also in this study, there are additional modifications to extract location names using the NER model, which has been customized according to the structure of naming location names in Indonesia. So from the text of the Twitter conversation, whether it's an address name or a description of a location name, it can get a location name that refers to the name of a place where it could be the location where an event occurred. The results of an Indonesian language location NER model, with an accuracy score of 97.67%, with a precision value of 90.57%, recall 59.30% and f1-score 71.67%.

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Identification of Features in ANN's Black Box using Dimensional Reduction and Correlation Analysis: A Case Study of Cardiovascular Disease Dataset

Identification of Features in ANN's Black Box using Dimensio...

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International Conference on Advanced Mechatronics, Intelligent Manufacture, and Industrial Automation (ICAMIMIA)

作者： Boby Siswanto Yaya Heryadi Wayan Suparta Antoni Wibowo Haryono Soeparno Lukas Computer Science Department BINUS Graduate Program-Doctor of Computer Science Bina Nusantara University Jakarta Indonesia Cognitive Engineering Research Group (CERG) Atma Jaya University Jakarta Indonesia

ISBN: (纸本)9781665499705

Artificial Neural Network (ANN) is a machine learning algorithm that can perform classification. ANN has limitations; namely, it has a black box working principle, which is unsure which feature is the most influential. This study is to identify the most influential features inside the ANN's black box using a classification model by applying Principal Component Analysis (PCA) dimension reduction combined with Pearson correlation analysis. The result of the proposed model can identify the name of the main features of the data inside the ANN's black box. This study uses two public Kaggle cardiovascular datasets. The first dataset consists of 13 features, and the second dataset consists of 12 features. The result is height and gender are the most influential features in the first dataset with the correlation value of 0.734; sex and smoking are the most influential features in the second dataset with the correlation value of 0.728. Black box model result with 2 PCA's features against a model with height and gender features in the first dataset resulting from the same accuracy on the test dataset of the classification prediction results with the value of 49.90%, while on the second dataset 58.30%.

关键词： Dimensionality reduction Analytical models Correlation Mechatronics Machine learning algorithms Artificial neural networks Predictive models

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Deep Learning with Greedy Layer-Wise Compound Scaling for Temperature and Humidity Prediction in Solar Dryer Dome

SSRN

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SSRN 2022年

作者： Cenggoro, Tjeng Wawan Elwirehardja, Gregorius Natanael Dominic, Nicholas Setiawan, Karli Eka Rahutomo, Reza Djuana, Endang Gunawan, Fergyanto E. Budiman, Arief S. Romeli, Sugiarto Pardamean, Bens Computer Science Department School of Computer Science Bina Nusantara University Jakarta11480 Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta11480 Indonesia Computer Science Department BINUS Graduate Program Master of Computer Science Program Bina Nusantara University Jakarta11480 Indonesia Information Systems Department School of Information Systems Bina Nusantara University Jakarta11480 Indonesia Electrical Engineering Department Faculty of Industrial Technology Universitas Trisakti Jakarta11440 Indonesia Industrial Engineering Department BINUS Graduate Program Master of Industrial Engineering Bina Nusantara University Jakarta11480 Indonesia Department of Manufacturing and Mechanical Engineering and Technology Oregon Institute of Technology Klamath FallsOR97601 United States PT. Impack Pratama Industri Jakarta Indonesia

Drying has been an eco-friendly and cost-efficient method to reduce post-harvest losses of agricultural crops. In various countries, the technique has been widely utilized in the form of Solar Dryer Dome (SDD) buildings. Accurate indoor microclimate forecasting is very important to implement smart control systems in SDDs that can maintain the ideal conditions, as the availability of solar energy is limited only at daytimes and the temperature may drop significantly during nighttimes in remote areas. The microclimate variables that play an important role in maintaining ideal environmental conditions include temperature and relative humidity. © 2022, The Authors. All rights reserved.

关键词： Forecasting

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computer Vision and Fuzzy Logic for Sustainable Indonesian Fisheries 3

Computer Vision and Fuzzy Logic for Sustainable Indonesian F...

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3rd International Conference on Eco Engineering Development, ICEED 2019

作者： Liawatimena, Suryadiputra Atmadja, Wiedjaja Abbas, Bahtiar Saleh Trisetyarso, Agung Wibowo, Antoni Barlian, Erland Hardanto, Lilik Tri Saputra, Adi Sakinah, Putri Purwoko, Hery Zulardi, Indra Computer Engineering Department Faculty of Engineering Bina Nusantara University Jakarta11480 Indonesia Computer Science Department BINUS Graduate Program - Doctor Computer Science Bina Nusantara University Jakarta11480 Indonesia Industrial Engineering Department Faculty of Engineering Bina Nusantara University Jakarta11480 Indonesia Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta11480 Indonesia Management Department BINUS Business School - Doctor of Research in Management Bina Nusantara University Jakarta11480 Indonesia

Tuna fishing in Indonesia is excessive and if left unchecked, some types of tuna will become extinct within 3-10 years. There is an urgent need to help MMAF for producing more accurate fish catches data. This paper proposed a system that utilizes computer vision, fuzzy logic and Global Positioning System (GPS) for supporting a sustainableIndonesian fishery by recognizing and measuring fish length, determine fish age and where is the catch location. The system can help authority to manage sustainable fisheries management in Indonesia. © 2020 Published under licence by IOP Publishing Ltd.

关键词： Machine learning

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Topological Learning for Motion Data via Mixed Coordinates

arXiv

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arXiv 2023年

作者： Luo, Hengrui Kim, Jisu Patania, Alice Vejdemo-Johansson, Mikael Lawrence Berkeley National Laboratory United States DataShape team Inria Saclay LMO Université Paris-Saclay France Department of Mathematics and Statistics University of Vermont United States Department of Mathematics CUNY College of Staten Island and Computer Science Program CUNY Graduate Center United States

Topology can extract the structural information in a dataset efficiently. In this paper, we attempt to incorporate topological information into a multiple output Gaussian process model for transfer learning purposes. To achieve this goal, we extend the framework of circular coordinates into a novel framework of mixed valued coordinates to take linear trends in the time series into consideration. One of the major challenges to learn from multiple time series effectively via a multiple output Gaussian process model is constructing a functional kernel. We propose to use topologically induced clustering to construct a cluster based kernel in a multiple output Gaussian process model. This kernel not only incorporates the topological structural information, but also allows us to put forward a unified framework using topological information in time and motion series. Copyright © 2023, The Authors. All rights reserved.

关键词： Time series

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Application of factor analysis method to support the users acceptance model of ERP systems implementation 4

Application of factor analysis method to support the users a...

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4th International Conference on Combinatorics, Graph Theory, and Network Topology, ICCGANT 2020

作者： Sardjono, W. Sudirwan, J. Priatna, W. Putra, G.R. Information Systems Management Department BINUS Graduate Program Master of Information Systems Management Bina Nusantara University Jakarta11480 Indonesia School of Information Systems Department BINUS Undergraduate Program Bina Nusantara University Jakarta11480 Indonesia Informatics Engineering Engineering Bhayangkara University Jakarta Raya Indonesia Computer Science Study Program Faculty of Mathematics and Natural Sciences Pakuan University Bogor Indonesia

An e-Commerce company has been using an Enterprise Resource Planning (ERP) system for several years, but is still constrained in its implementation, this is reflected in the number of issue/change request tickets submitted by users who have not been able to reach ideal conditions. To overcome this problem, we need an appropriate reference model, the ERP system user acceptance model in companies. The study conducted factors that influence the level of acceptance of SAP ERP users in the XYZ group to then determine a model that is able to explain practically the level of ERP system user acceptance, which in turn can produce concrete proposals to increase ERP system user acceptance. Research is quantitative descriptive using factor analysis and regression analysis methods. The research method uses a questionnaire with a total of 107 valid respondents coming from 8 company names under the XYZ group in 6 Southeast Asian countries. The conclusion of the study is that there are 24 indicators and 4 factors that influence user acceptance of the SAP ERP system. These four factors are the low contribution of the ERP system, the quality of ERP systems and data, the development of ERP systems, and also the low quality of ERP system supporters. It is hoped that by optimizing the value of the 4 factors, the XYZ group can increase user acceptance of the SAP ERP system so that the system can provide benefits expected by the company to be competitive advantage. © 2021 Published under licence by IOP Publishing Ltd.

关键词： Factor analysis

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Drones computer Vision using Deep Learning to Support Fishing Management in Indonesia 3

Drones Computer Vision using Deep Learning to Support Fishin...

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3rd International Conference on Eco Engineering Development, ICEED 2019

作者： Liawatimena, Suryadiputra Atmadja, Wiedjaja Abbas, Bahtiar Saleh Trisetyarso, Agung Wibowo, Antoni Barlian, Erland Hardanto, Lilik Tri Triany, Natassya Afdalena Faisal Sulistiawan, Jaka Yojana, Albert Cahya Computer Engineering Department Faculty of Engineering Bina Nusantara University Jakarta11480 Indonesia Computer Science Department BINUS Graduate Program - Doctor Computer Science Bina Nusantara University Jakarta11480 Indonesia Industrial Engineering Department Faculty of Engineering Bina Nusantara University Jakarta11480 Indonesia Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta11480 Indonesia Management Department BINUS Business School - Doctor of Research in Management Bina Nusantara University Jakarta11480 Indonesia

It is necessary to study technical factors such as bait used, oceanographic conditions of fishing areas and skipjack tuna trade patterns (Katsuwonus pelamis) as well as other factors in Sulawesi Fisheries. Supporting data to study these technical factors need to be obtained so that it can be improved throughout the year as a skipjack fishing standard with weights taken by the skipjack weights. Therefore, drones and underwater drones with cameras with high-resolution video and images to be fed and processed by computer vision. These drones are operated via Huhate ships which are then used to test efficient technical factors as expected, can be used in determining the size, shape, and colour as well as the analysis of skipjack fish that are in the Fish Aggregating Devices (FADs or Rumpon) in order to manage the management of fisheries managed in Indonesia. © 2020 Published under licence by IOP Publishing Ltd.

关键词： Drones

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