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A Deep Learning Model Incorporating Knowledge Representation Vectors and Its Application in Diabetes Prediction

Disease Markers 2022年第1期2022卷 7593750页

作者： Xu, He Zheng, Qunli Zhu, Jingshu Xie, Zuoling Cheng, Haitao Li, Peng Ji, Yimu School of Computer Science Nanjing University of Posts and Telecommunications Nanjing 210023 China Jiangsu High Technology Research Key Laboratory for Wireless Sensor Networks Jiangsu Province Nanjing 210023 China Institute of High Performance Computing and Big Data Nanjing University of Posts and Telecommunications Nanjing 210023 China Nanjing Center of HPC China Nanjing 210023 China Jiangsu Research Engineering of HPC and Intelligent Processing Nanjing University of Posts and Telecommunications Nanjing 210023 China Department of Endocrinology Zhongda Hospital Southeast University Nanjing 210009 China

The deep learning methods for various disease prediction tasks have become very effective and even surpass human experts. However, the lack of interpretability and medical expertise limits its clinical application. This paper combines knowledge representation learning and deep learning methods, and a disease prediction model is constructed. The model initially constructs the relationship graph between the physical indicator and the test value based on the normal range of human physical examination index. And the human physical examination index for testing value by knowledge representation learning model is encoded. Then, the patient physical examination data is represented as a vector and input into a deep learning model built with self-attention mechanism and convolutional neural network to implement disease prediction. The experimental results show that the model which is used in diabetes prediction yields an accuracy of 97.18% and the recall of 87.55%, which outperforms other machine learning methods (e.g., lasso, ridge, support vector machine, random forest, and XGBoost). Compared with the best performing random forest method, the recall is increased by 5.34%, respectively. Therefore, it can be concluded that the application of medical knowledge into deep learning through knowledge representation learning can be used in diabetes prediction for the purpose of early detection and assisting diagnosis. © 2022 He Xu et al.

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Convex Optimization for Nonequilibrium Steady States on a Hybrid Quantum Processor

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Physical Review Letters 2023年第24期130卷 240601-240601页

作者： Jonathan Wei Zhong Lau Kian Hwee Lim Kishor Bharti Leong-Chuan Kwek Sai Vinjanampathy Centre for Quantum Technologies National University of Singapore 3 Science Drive 2 Singapore 117543 Joint Center for Quantum Information and Computer Science and Joint Quantum Institute NIST/University of Maryland College Park Maryland 20742 USA Institute of High Performance Computing (IHPC) Agency for Science Technology and Research (A*STAR) 1 Fusionopolis Way No. 16-16 Connexis Singapore 138632 Republic of Singapore MajuLab CNRS-UNS-NUS-NTU International Joint Research Unit Singapore UMI 3654 Singapore National Institute of Education Nanyang Technological University 1 Nanyang Walk Singapore 637616 Singapore School of Electrical and Electronic Engineering Block S2.1 50 Nanyang Avenue Singapore 639798 Singapore Department of Physics Indian Institute of Technology-Bombay Powai Mumbai 400076 India Centre of Excellence in Quantum Information Computation Science and Technology Indian Institute of Technology Bombay Powai Mumbai 400076 India

Finding the transient and steady state properties of open quantum systems is a central problem in various fields of quantum technologies. Here, we present a quantum-assisted algorithm to determine the steady states of open system dynamics. By reformulating the problem of finding the fixed point of Lindblad dynamics as a feasibility semidefinite program, we bypass several well-known issues with variational quantum approaches to solving for steady states. We demonstrate that our hybrid approach allows us to estimate the steady states of higher dimensional open quantum systems and discuss how our method can find multiple steady states for systems with symmetries.

关键词： Learning theory Machine learning Open quantum systems & decoherence Quantum algorithms Nonequilibrium systems

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A Deep Concept-aware Model for predicting and explaining restaurant future status

A Deep Concept-aware Model for predicting and explaining res...

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IEEE International Conference on Web Services (ICWS)

作者： Hao Liao Xiaojie Zhang Xin Li Mingyang Zhou Alexandre Vidmer Rui Mao Guangdong Province Key Laboratory of Popular High Performance Computers College of Computer Science and Software Engineering Shenzhen University Guangdong Province Engineering Center of China-made High Performance Data Computing System Shenzhen City Key Laboratory of Service Computing and Application Shenzhen China Institute of Big Data Intelligent Management and Decision Shenzhen University Shenzhen China

ISBN: (数字)9781728187860

ISBN: (纸本)9781728187877

Nowadays, with the development of web services, the survival of online service has captured public attention significantly. Future prediction of business is crucial to the shopkeepers. Predicting how the business will develop and explaining what key factors are leading to it are two most important tasks. Existing literatures usually tackle only one of these two tasks, ignoring that they are two closely related tasks and complement each other. In this paper, we propose a review-based neural model, named Deep Concept-aware Model (DCA), to predict restaurants' future status and provide explainable sentences simultaneously in an end2end framework. Specifically, we use co-attention to select concepts and implement prediction and explanation tasks through Factorization Machine and Gated Recurrent Unit, respectively. We conduct extensive experiments on three Chinese cities' datasets. The proposed joint model outperforms the state-of-the-art baseline methods for both prediction (average 40.96% improvement in AUC) and explanation (average 9.72% improvement in BLEU and 86.05% in Precision metric of ROUGE).

关键词： Web services Urban areas Predictive models Prediction algorithms Data models Task analysis Business

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The Library for Hadoop Deflate Compression Based on FPGA Accelerator with Load Balance 20

The Library for Hadoop Deflate Compression Based on FPGA Acc...

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20th International Conference on Parallel and Distributed computing, Applications and Technologies, PDCAT 2019

作者： Du, Haixin Zhang, Jiankui Sha, Shihao Ye, Cai Luo, Qiuming College of Computer Science and Software Engineering Shenzhen University NHPCC/Guangdong Key Laboratory of Popular HPC Guangdong Province Engineering Center of China-made High Performance Data Computing System Shenzhen China

ISBN: (纸本)9781728126166

Hadoop application will produce lots of intermediate results in the map/reduce process that requires disk I/O and network transmission. By compressing the large-scale data of intermediate result, it will greatly improve disk access efficiently and reduce program run time. Hardware-accelerated solutions have become more desirable. This paper design a multi-FPGA compression accelerator on the Hadoop platform, and the system performance analysis compared with a software-only solution that mainly uses CPU to processing. The testing programs are zpipe, TestDFSIO and Terasort. In contrast with the software-only solution. The max speedup of zpipe is 6.55X (single FPGA) and 10.24X (dual FPGA), the max speedup of TestDFSIO is 6.28X (single FPGA) and 6.28X (dual FPGA), and the max speedup of Terasort application is up to 3.25X(single FPGA) and 3.35X(dual FPGA). © 2019 IEEE.

关键词： Field programmable gate arrays (FPGA)

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A holistic stream partitioning algorithm for distributed stream processing systems 20

A holistic stream partitioning algorithm for distributed str...

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20th International Conference on Parallel and Distributed computing, Applications and Technologies, PDCAT 2019

作者： Li, Kejian Liu, Gang Lu, Minhua Guangdong Province Key Laboratory of Popular High Performance Computers Guangdong Province Engineering Center of China-made High Performance Data Computing System College of Computer Science and Software Engineering Shenzhen University Shenzhen518060 China School of Biomedical Engineering Shenzhen University Shenzhen518060 China

ISBN: (纸本)9781728126166

The performances of modern distributed stream processing systems are critically affected by the distribution of the load across workers. Skewed data streams in real world are very common and pose a great challenge to these systems, especially for stateful applications. Key splitting, which allows a single key to be routed to multiple workers, is a great idea to achieve good balance of load in the cluster. However, it comes with the cost of increased memory consumption and computation overhead as well as network communication. In this paper, we present a new definition of metric to model the cost of key splitting for intra-operator parallelism in stream processing systems and provide a novel perspective to reduce replication factor while keeping both overall load imbalance and processing latency low. Similar to previous work, our approach treats the head and the tail of the distribution differently in order to reduce memory requirements. For the head, it uses our proposed notion of regional load imbalance to decide dynamically whether to make one more worker responsible for the heavy hitter or not. For the tail, it simply uses hash partitioning to keep the size of the routing table for the head as small as possible. Extensive experimental evaluation demonstrates that our approach provides superior performance compared to the state-of-the-art partitioning algorithms in terms of load imbalance, replication factor and latency over different levels of skewed stream distributions. © 2019 IEEE.

关键词： Distributed parameter control systems

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Lightning Talks of EduHPC 2022

Lightning Talks of EduHPC 2022

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Workshop on Education for high performance computing (EduHPC)

作者： Apan Qasem Hartwig Anzt Eduard Ayguade Katharine Cahill Ramon Canal Jany Chan Eric Fosler-Lussier Fritz Göbel Arpan Jain Marcel Koch Mateusz Kuzak Josep Llosa Raghu Machiraju Xavier Martorell Pratik Nayak Shameema Oottikkal Marcin Ostasz Dhabaleswar K. Panda Dirk Pleiter Rajiv Ramnath Maria-Ribera Sancho Alessio Sclocco Aamir Shafi Hanno Spreeuw Hari Subramoni Karen Tomko Department of Computer Science Texas State University USA Karlsruhe Institute of Technology (KIT) Karlsruhe Germany University of Tennessee (UTK) Knoxville USA Barcelona Supercomputing Center and Universitat Politécnica de Catalunya Spain Ohio Supercomputer Center USA College of Engineering The Ohio State University USA Netherlands eScience Center The Netherlands ETP4HPC The Netherlands PDC Center for High Performance Computing KTH Royal Institute of Technology Sweden

ISBN: (纸本)9781665473675

The lightning talks at EduHPC provide an opportunity to share early results and insights on parallel and distributed computing (PDC) education and training efforts. The four lightning talks at EduHPC 2022 cover a range of topics in broadening PDC education: (i) curriculum development efforts for the European Masters in HPC program, (ii) bootcamps for CI professionals who support the running of AI workloads on HPC systems, (iii) a GPU programming course following the Carpentries model and (iv) peer-review assignments to help students write efficient parallel algorithms within sustainable software libraries.

关键词： Training Codes Software libraries high performance computing Lightning Graphics processing units Peer-to-peer computing

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Learning with Group Noise

arXiv

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arXiv 2021年

作者： Wang, Qizhou Yao, Jiangchao Gong, Chen Liu, Tongliang Gong, Mingming Yang, Hongxia Han, Bo Department of Computer Science Hong Kong Baptist University Hong Kong Key Laboratory of Intelligent Perception and Systems for High-Dimensional Information of MoE School of Computer Science and Engineering Nanjing University of Science and Technology China Data Analytics and Intelligence Lab Alibaba Group China Department of Computing Hong Kong Polytechnic University Hong Kong Trustworthy Machine Learning Lab School of Computer Science University of Sydney Australia School of Mathematics and Statistics University of Melbourne Australia

Machine learning in the context of noise is a challenging but practical setting to plenty of real-world applications. Most of the previous approaches in this area focus on the pairwise relation (casual or correlational relationship) with noise, such as learning with noisy labels. However, the group noise, which is parasitic on the coarse-grained accurate relation with the fine-grained uncertainty, is also universal and has not been well investigated. The challenge under this setting is how to discover true pairwise connections concealed by the group relation with its fine-grained noise. To overcome this issue, we propose a novel Max-Matching method for learning with group noise. Specifically, it utilizes a matching mechanism to evaluate the relation confidence of each object (cf. Figure 1) w.r.t. the target, meanwhile considering the Non-IID characteristics among objects in the group. Only the most confident object is considered to learn the model, so that the fine-grained noise is mostly dropped. The performance on a range of real-world datasets in the area of several learning paradigms demonstrates the effectiveness of Max-Matching. Copyright © 2021, The Authors. All rights reserved.

关键词： Machine learning

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Anomaly detection on attributed networks via contrastive self-supervised learning

arXiv

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arXiv 2021年

作者： Liu, Yixin Li, Zhao Pan, Shirui Gong, Chen Zhou, Chuan Karypis, George The Department of Data Science and AI Faculty of Information Technology Monash University ClaytonVIC3800 Australia The Alibaba Group Hangzhou310000 China The PCA Laboratory Key Laboratory of Intelligent Perception and Systems for High-Dimensional Information Ministry of Education School of Computer Science and Engineering Nanjing University of Science and Technology Nanjing210094 China The Department of Computing The Hong Kong Polytechnic University Hong Kong The Academy of Mathematics and Systems Science Chinese Academy of Sciences Beijing100093 China The Department of Computer Science and Engineering University of Minnesota MinneapolisMN55455 United States

Anomaly detection on attributed networks attracts considerable research interests due to wide applications of attributed networks in modeling a wide range of complex systems. Recently, the deep learning-based anomaly detection methods have shown promising results over shallow approaches, especially on networks with high-dimensional attributes and complex structures. However, existing approaches, which employ graph autoencoder as their backbone, do not fully exploit the rich information of the network, resulting in suboptimal performance. Furthermore, these methods do not directly target anomaly detection in their learning objective and fail to scale to large networks due to the full graph training mechanism. To overcome these limitations, in this paper, we present a novel Contrastive self-supervised Learning framework for Anomaly detection on attributed networks (CoLA for abbreviation). Our framework fully exploits the local information from network data by sampling a novel type of contrastive instance pair, which can capture the relationship between each node and its neighboring substructure in an unsupervised way. Meanwhile, a well-designed graph neural network-based contrastive learning model is proposed to learn informative embedding from high-dimensional attributes and local structure and measure the agreement of each instance pairs with its outputted scores. The multi-round predicted scores by the contrastive learning model are further used to evaluate the abnormality of each node with statistical estimation. In this way, the learning model is trained by a specific anomaly detection-aware target. Furthermore, since the input of the graph neural network module is batches of instance pairs instead of the full network, our framework can adapt to large networks flexibly. Experimental results show that our proposed framework outperforms the state-of-the-art baseline methods on all seven benchmark datasets. © 2021, CC BY.

关键词： Anomaly detection

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Characterisation of state-preparation uncertainty in quantum key distribution

arXiv

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arXiv 2022年

作者： Huang, Anqi Mizutani, Akihiro Lo, Hoi-Kwong Makarov, Vadim Tamaki, Kiyoshi Institute for Quantum Information State Key Laboratory of High Performance Computing College of Computer Science and Technology National University of Defense Technology Changsha410073 China Graduate School of Engineering Science Osaka University Toyonaka Osaka560-8531 Japan Department of Electrical & Computer Engineering Department of Physics University of Toronto TorontoONM5S 3G4 Canada Department of Physics University of Hong Kong Pokfulam Hong Kong Quantum Bridge Technologies Inc. 100 College Street TorontoONM5G 1L5 Canada Russian Quantum Center Skolkovo Moscow121205 Russia Shanghai Branch National Laboratory for Physical Sciences at Microscale and CAS Center for Excellence in Quantum Information University of Science and Technology of China Shanghai201315 China NTI Center for Quantum Communications National University of Science and Technology MISiS Moscow119049 Russia Faculty of Engineering University of Toyama Gofuku 3190 Toyama930-8555 Japan

To achieve secure quantum key distribution, all imperfections in the source unit must be incorporated in a security proof and measured in the lab. Here we perform a proof-of-principle demonstration of the experimental techniques for characterising the source phase and intensity fluctuation in commercial quantum key distribution systems. When we apply the measured phase fluctuation intervals to the security proof that takes into account fluctuations in the state preparation, it predicts a key distribution distance of over 100 km of fiber. The measured intensity fluctuation intervals are however so large that the proof predicts zero key, indicating a source improvement may be needed. Our characterisation methods pave the way for a future certification standard. Copyright © 2022, The Authors. All rights reserved.

关键词： Quantum cryptography

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The effects of different travel modes and travel destinations on COVID-19 transmission in global cities

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science Bulletin 2022年第6期67卷 588-592,M0003页

作者： Rui Zhu Luc Anselin Michael Batty Mei-Po Kwan Min Chen Wei Luo Tao Cheng Che Kang Lim Paolo Santi Cheng Cheng Qiushi Gu Man Sing Wong Kai Zhang Guonian Lü Carlo Ratti Department of Land Surveying and Geo-Informatics the Hong Kong Polytechnic UniversityHong KongChina Key Laboratory of Virtual Geographic Environment(Ministry of Education) Nanjing Normal UniversityNanjing 210023China Senseable City Laboratory Future Urban Mobility IRGSingapore-MIT Alliance for Research and TechnologySingapore 138602Singapore Center for Spatial Data Science Division of the Social SciencesUniversity of ChicagoChicago IL 60637USA School of Geography Science Nanjing Normal UniversityNanjing 210023China Centre for Advanced Spatial Analysis Faculty of the Built EnvironmentUniversity College LondonLondon WC1E 6BTUK Department of Geography and Resource Management the Chinese University of Hong KongHong KongChina Institute of Space and Earth Information Science the Chinese University of Hong KongHong KongChina Department of Human Geography and Spatial Planning Utrecht UniversityUtrecht 3584 CSNetherlands State Key Laboratory Cultivation Base of Geographical Environment Evolution Nanjing 210023China Department of Geography National University of SingaporeSingapore 117570Singapore SpaceTimeLab Department of CivilEnvironmental and Geomatic EngineeringUniversity College LondonLondon WC1E 6BTUK Department of Clinical Translational Research Singapore General HospitalSingapore 169856Singapore Division of Clinical Immunology and Transfusion Medicine Department of Laboratory MedicineKarolinska InstitutetStockholm 17177Sweden Senseable City Laboratory Department of Urban Studies and PlanningMassachusetts Institute of TechnologyCambridgeMA 02139USA Istituto di Informatica e Telematica del CNR Pisa 56124Italy Department of System Science Institute of High Performance Computing Agency for ScienceTechnology and ResearchSingapore 138632Singapore Department of Tourism Studies School of HumanitiesSoutheast UniversityNanjing 210096China

The international community has made significant efforts to flatten the COVID-19 curve,including predicting transmission[1,2],executing unprecedented global lockdowns and social distancing[3,4],promoting the wearing of facemasks and social distancing measures[5],and isolating confirmed cases and contacts[6].Because of the adverse consequences of these lockdown measures[7],many cities have reopened so they can rebuild their ***,as mobility has gradually returned towards normal,imported cases from unknown sources have disrupted the recovery situation,and cities are continually at high risk of new waves of infection[8,9]since airborne transmission is the dominant transmission route[10].

关键词：多变量时间序列疫情传播出行方式谷歌公司交通出行病毒传播出行行为大城市

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