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Proceedings on the International Symposium on Parallel Architectures, Algorithms and Networks, I-SPAN

作者： Kuo, Yu-Lun Yang, Chao-Tung Lai, Chuan-Lin Tseng, Tsai-Ming High-Perf. Computing Laboratory Department of Computer Science Tunghai University Taichung 407 Taiwan

Internet computing and Grid technologies promise to change the way we tackle complex problems. They will enable large-scale aggregation and sharing of computational, data and other resources across institutional boundaries. And harnessing these new technologies effectively will transform scientific disciplines ranging from high-energy physics to the life sciences. The computational analysis of biological sequences is a kind of computation driven science. Cause the biology data growing quickly and these databases are heterogeneous. We can use the grid system sharing and integrating the heterogeneous biology database. As we know, bioinformatics tools can speed up analysis the large-scale sequence data, especially about sequence alignment. The FASTA is a tool for aligning multiple protein or nucleotide sequences. FASTA which we used is a distributed and parallel version. The software uses a message-passing library called MPI (Message Passing Interface) and runs on distributed workstation clusters as well as on traditional parallel computers. A grid computing environment is proposed and constructed on multiple Linux PC Clusters by using Globus Toolkit (GT) and SUN Grid Engine (SGE). The experimental results and performances of the bioinformatics tool using on grid system are also presented in this paper.

关键词： Internet

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Design and implementation of a computational Grid for bioinformatics

Design and implementation of a computational Grid for bioinf...

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Proceedings - 2004 IEEE International Conference on e-Technology, e-Commerce and e-Service, EEE 2004

作者： Yang, Chao-Tung Kuo, Yu-Lun Lai, Chuan-Lin High-Perf. Computing Laboratory Department of Computer Science Tunghai University Taichung 407 Taiwan

ISBN: (纸本)0769520731

The popular technologies, internet computing and Grid technologies promise to change the way we tackle complex problems. They will enable large-scale aggregation and sharing of computational, data and other resources across institutional boundaries. And harnessing these new technologies effectively will transform scientific disciplines ranging from high-energy physics to the life sciences. The computational analysis of biological sequences is a kind of computation driven science. Cause the biology data growing quickly and these databases are heterogeneous. We can use the grid system sharing and integrating the heterogeneous biology database. As we know, bioinformatics tools can speed up analysis the large-scale sequence data, especially about sequence alignment and analysis. The FASTA is a tool for aligning multiple protein or nucleotide sequences. These two bioinformatics software which we used is a distributed and parallel version. The software uses a message-passing library called MPI (Message Passing Interface) and runs on distributed workstation clusters as well as on traditional parallel computers. A grid computing environment is proposed and constructed on multiple Linux PC Clusters by using Globus Toolkit (GT) and SUN Grid Engine (SGE). The experimental results and performances of the bioinformatics tool using on grid system are also presented in this paper.

关键词： Information technology

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A resource broker for computing nodes selection in grid computing environments 3rd

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3rd International Conference on Grid and Cooperative computing, GCC2004

作者： Yang, Chao-Tung Lai, Chuan-Lin Shih, Po-Chi Li, Kuan-Ching High-Performance Computing Laboratory Department of Computer Science and Information Engineering Tunghai University Taichung407 Taiwan Parallel and Distributed Processing Center Department of Computer Science and Information Management Providence University Shalu Taichung433 Taiwan

ISBN: (纸本)3540235647

As Grid computing is becoming a reality, there is a need for managing and monitoring the available resources worldwide, as well as the need for conveying these resources to the everyday user. This paper describes a resource broker with its main function as to match the available resources to the user’s needs. The use of the resource broker provides a uniform interface to access any of the available and appropriate resources using user’s credentials. The resource broker runs on top of the Globus Toolkit. Therefore, it provides security and current information about the available resources and serves as a link to the diverse systems available in the Grid. © Springer-Verlag Berlin Heidelberg 2004.

关键词： Grid computing

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Building an e-learning platform by Access Grid and Data Grid technologies

Building an e-learning platform by Access Grid and Data Grid...

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Proceedings - 2004 IEEE International Conference on e-Technology, e-Commerce and e-Service, EEE 2004

作者： Ho, Hsin-Chuan Yang, Chao-Tung Chang, Chi-Chung High-Performance Computing Lab. Department of Computer Science Tungahi University Taichung 407 Taiwan National Dali Senior High School Taichung 407 Taiwan

ISBN: (纸本)0769520731

Due to overall popularity of the Internet, e-learning has become a hot method of learning in recent years. Through the Internet, learners can freely absorb new knowledge without the restriction of time and place. Many companies have adopted e-learning to train their employees. The e-learning system can make an enterprise more competitive by increasing the knowledge of its employees. As we know, e-learning has become one of the most potential e-commerce businesses. At present, most e-learning environment architectures are in consideration of a single computer or server as its erecting foundation. As soon as its work load increases, the software and hardware need to be updated or renewed;this is a big burden to a company with insufficient budget. Thus, in this research we employ a kind of Grid computing technology, called "Access Grid", to integrate the idle computer resources in an enterprise into an e-learning platform for substituting the purchase of costly high-level server and equipment. The Access Grid supports group-to-group communication via high-speed networking over the Internet. It provides high quality audio and real-time video interactive interface for e-learning users. All the hardware cost is reasonable so that companies or academies can easily set up their own Access Grid Node. By using Access Grid technologies, enterprises can integrate their training materials into knowledge repository such as "Data Grid" as the e-learning VOD platform so that the knowledge can be shared and published more flexibly and widely.

关键词： Electronic commerce

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Estimate of error bounds in the improved support vector regression

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自然科学进展（英文版） 2004年第4期14卷 362-364页

作者： SUN Yanfeng LIANG Yanchun WU Chunguo Yang Xiaowei LEE Heow Pueh LIN Wu Zhong College of Computer Science and Technology Jilin UniversityChangchun 130012China College of Computer Science and Technology Jilin UniversityChangchun 130012China Institute of High Performance Computing Singapore 117528Singapore Department of Applied Mathematics South China University of TechnologyGuangzhou 510640China Centre for ACES Department of Mechanical EngineeringNational University of Singapore119260Singapore Institute of High Performance Computing Singapore 117528Singapore

An estimate of a generalization error bound of the improved support vector regression(SVR)is provided based on our previous *** boundedness of the error of the improved SVR is proved when the algorithm is applied to t... 详细信息

关键词： support vector regression(SVR) generalization error approximation error estimation error

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GOOMPI: A generic object oriented message passing interface: Design and implementation

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IFIP International Conference on Network and Parallel computing, NPC 2004

作者： Yao, Zhen Zheng, Qi-Long Chen, Guo-Liang National High Performance Computing Center at Hefei Department of Computer Science and Technology University of Science and Technology of China HefeiAnhui230027 China

ISBN: (纸本)3540233881

This paper discusses the application of object-oriented and generic programming techniques in high performance parallel computing, then presents a new message-passing interface based on object-oriented and generic programming techniques — GOOMPI, describes its design and implementation issues, shows its values in designing and implementing parallel algorithms or applications based on the message-passing model through typical examples. This paper also analyzes the performance of our GOOMPI implementation. © IFIP International Federation for Information Processing 2004.

关键词： Message passing

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Design of an OGSA-based metaservice architecture

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3rd International Conference on Grid and Cooperative computing, GCC2004

作者： Du, Zhi-Hui Lau, Francis C. M. Wang, Cho-Li Lam, Wai-kin He, Chuan Wang, Xiaoge Chen, Yu Li, Sanli Department of Computer Science and Technology Tsinghua University Beijing100084 China Department of Computer Science The University of Hong Kong Hong Kong The Hong Kong Institute of High Performance Computing Hong Kong

ISBN: (纸本)3540235647

This paper proposes a MetaService-based architecture for dealing with the problem of services management in grid systems. We introduce the basic idea of MetaService, and then discuss MetaService classification, new MetaService construction, and the MetaService working mechanism. A graph and a tree can be used for the optimization function of MetaService. An example from real life is used to explain the role of MetaService. We give an overview of a grid prototype system which has incorporated some of the ideas presented. A brief comparison is given between MetaService and other related work. © Springer-Verlag Berlin Heidelberg 2004.

关键词： Trees (mathematics)

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A modified integer-coding genetic algorithm for job shop scheduling problem

A modified integer-coding genetic algorithm for job shop sch...

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8th Pacific Rim International Conference on Artificial Intelligence, PRICAI 2004

作者： Wu, Chunguo Xiang, Wei Liang, Yanchun Lee, Heow Pueh Zhou, Chunguang College of Computer Science and Technology Jilin University Key Laboratory of Symbol Computation and Knowledge Engineering of the Ministry of Education Changchun130012 China Institute of High Performance Computing Singapore117528 Singapore

ISBN: (纸本)3540228179

An operation template is proposed in this paper for describing the mapping between operations and a subset of natural numbers. With such operation template, a job shop scheduling problem (JSSP) can be transformed into a traveling salesman problem (TSP), hence the integer-coding genetic algorithm for TSP can be easily applied and modified. A decoding strategy, called virtual job shop, is proposed to evaluate the fitness of the individual in GA population. The integration of the operation template and virtual job shop makes the existing integer-coding GA possible for solving an extension of a classical job shop scheduling problem. © Springer-Verlag Berlin Heidelberg 2004.

关键词： Traveling salesman problem

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Grid computing in Taiwan

Grid computing in Taiwan

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Proceedings - 10th IEEE International Workshop on Future Trends of Distributed computing Systems

作者： Yang, Chao-Tung Chu, William C. High-Performance Computing Lab. Department of Computer Science Tunghai University Taichung 407 Taiwan Software Eng. and Technology Center Department of Computer Science Tunghai University Taichung 407 Taiwan

ISBN: (纸本)0769521185

Grid computing focuses on aggregating resources (e.g., processor cycles, disk storage and contents) from a large-scale computing environment. It intends to deliver high-performance distributed platforms for computation- and/or data-intensive applications. In this paper, we will study the enabling techniques for grid computing for high-performance computing. Our goals are to (1) understand the design of these key components, (2) set up a grid computing platform, (3) learn how to create grid-enabled high-performance applications, and (4) share experiences on constructing such platforms and applications from the status of Taiwan.

关键词： Computational methods

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A parallel loop self-scheduling on grid computing environments

A parallel loop self-scheduling on grid computing environmen...

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International Symposium on Parallel Architectures, Algorithms and Networks (ISPAN)

作者： Kuan-Wei Cheng Chao-Tung Yang Chuan-Lin Lai Shun-Chyi Chang High-Performance Computing Laboratory Department of Computer Science and Information Engineering Tunghai University Taichung Taiwan

ISBN: (纸本)0769521355

Internet computing and grid technologies promise to change the way we tackle complex problems. They will enable large-scale aggregation and sharing of computational, data and other resources across institutional boundaries. And harnessing these new technologies effectively will transform scientific disciplines ranging from high-energy physics to the life sciences. In this paper, a grid computing environment is proposed and constructed on multiple PC clusters by using Globus Toolkit (GT) and SUN Grid Engine (SGE). The experimental results are also conducted by using the matrix multiplication to demonstrate the performance. On the other hand, the approaches to deal with scheduling and load balancing on multiple heterogeneous PC clusters computer system are not mature. Self-scheduling schemes which are suitable for parallel loops with independent iterations on heterogeneous cluster computer system have been designed in the past. However, these schemes, such as FSS, GSS and TSS, can not achieve load balancing in extremely heterogeneous environment. We propose a heuristic approach based upon a two-phase scheme to solve parallel regular loop scheduling problem on an extremely heterogeneous grid computing environment.

关键词： Grid computing Processor scheduling Load management Internet Large-scale systems Physics Sun Search engines Concurrent computing Frequency selective surfaces

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