Large sparse linear algebraic systems can be found in a variety of scientific and engineering fields, and many scientists strive to solve them in an efficient and robust manner. In this paper, we propose an interpreta...
详细信息
SUMMARY:A number of alignment-free methods have been proposed for phylogeny reconstruction over the past two decades. But there are some long-standing challenges in these methods, including requirement of huge compute...
SUMMARY:A number of alignment-free methods have been proposed for phylogeny reconstruction over the past two decades. But there are some long-standing challenges in these methods, including requirement of huge computer memory and CPU time, and existence of duplicate computations. In this article, we address these challenges with the idea of compressed vector, fingerprint and scalable memory management. With these ideas we developed the DLTree algorithm for efficient implementation of the dynamical language model and whole genome-based phylogenetic analysis. The DLTree algorithm was compared with other alignment-free tools, demonstrating that it is more efficient and accurate for phylogeny reconstruction.
AVAILABILITY AND IMPLEMENTATION:The DLTree algorithm is freely available at http://***.
CONTACT:yuzuguo@*** or yangjy@***.
SUPPLEMENTARY INFORMATION:Supplementary data are available at Bioinformatics online.
This paper proposes a virtual element method (VEM) combined with a second-order implicit-explicit scheme based on the scalar auxiliary variable (SAV) method for the incompressible magnetohydrodynamics (MHD) equations....
详细信息
This paper introduces a preconditioned method designed to comprehensively address the saddle point system with the aim of improving convergence efficiency. In the preprocessor construction phase, a technical approach ...
详细信息
The difference method for the space fractional coupled nonlinear Schrödinger equations (CNLS) is studied. The fractional centered difference is used to approximate the space fractional Laplacian. This scheme cons...
详细信息
The difference method for the space fractional coupled nonlinear Schrödinger equations (CNLS) is studied. The fractional centered difference is used to approximate the space fractional Laplacian. This scheme conserves the discrete mass and energy. Due to the nonlocal nature of fractional Laplacian, in the classic Sobolev space, it is hard to obtain the error estimation in l ∞ . To overcome this difficulty, the fractional Sobolev space H α / 2 and a fractional norm equivalence in H α / 2 are introduced. Then the convergence of order O ( h 2 + τ 2 ) in l ∞ is proved by fractional Sobolev inequality, where h is the mesh size and τ is the time step. Numerical examples are given to illustrate the theoretical results at last.
The article mainly introduces preprocessing algorithms for solving linear equation systems. This algorithm uses three algorithms as inner iterations, namely RPCG algorithm, ADI algorithm, and Kaczmarz algorithm. Then,...
详细信息
Ferrofluid is a colloidal suspension system with magnetic nanoparticles, the overall field of study in ferrofluid has a highly interdisciplinary character in practical applications. In this paper a set of parabolized ...
详细信息
Ferrofluid is a colloidal suspension system with magnetic nanoparticles, the overall field of study in ferrofluid has a highly interdisciplinary character in practical applications. In this paper a set of parabolized stability equations(PSEs)of ferrofluid is represented by Rosensweig equations. The characteristic analysis show that in subsonic region the nonlinear PSEs of ferrofluid are parabolical, and in supersonic region are elliptical. The PSEs of ferrofluid is solved numerically for heat conduction process and RT instability problem, respectively. The results of characteristic analysis and numerical simulation all verify that the basic characteristic of ferrofluid are not influenced by the external magnetic field, and the viscosity is the only reason for the variation of ellipticity of PSEs of ferrofluid. That is to say, the external magnetic field and the viscosity are essentially different.
To address the limitations of the FDNA approach, in this paper, we analyze the dependency of the receiver node on the feeder nodes as well as the impact of the node's operability level on the system effectiveness,...
详细信息
Formation of a very stable, unprecedented pyrazole-ring fused derivative of endohedral metallofullerenes was achieved by the first 1,3-dipolar cycloaddition reaction of Sc3N@C80 with diphenylnitrilimine in a highly re...
Spouted bed has drawn much attention due to its good heat and mass transfer efficiency in many chemical *** the flow patterns and heat and mass transfer inside a spouted bed can help optimize the spouting ***,in this ...
详细信息
Spouted bed has drawn much attention due to its good heat and mass transfer efficiency in many chemical *** the flow patterns and heat and mass transfer inside a spouted bed can help optimize the spouting ***,in this study,the effects of particle shape on the hydrodynamics and heat transfer in a spouted bed are *** is done by using a validated computational fluid dynamics-discrete element method(CFD-DEM)model,considering volume-equivalent spheres and oblate and prolate *** results are analysed in detail in terms of the flow pattern,microstruc-ture,and heat transfer *** numerical results show that the prolate spheroids(Ar=2.4)form the largest bubble from the beginning of the spouting process and rise the highest because the fluid drag forces can overcome the interlocking and particle-particle frictional *** with spherical particles,ellipsoidal spheroids have better mobility because of the stronger rotational kinetic energy resulting from the rough surfaces and nonuniform *** addition,the oblate spheroid system exhibits better heat transfer performance benefiting from the larger surface area,while prolate spheroids have poor heat transfer efficiency because of their orientation *** findings can serve as a reference for optimizing the design and operation of complex spouted beds.
暂无评论