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Medical Imaging 2009: Biomedical Applications in Molecular, Structural, and Functional Imaging

作者： Qin, Chenghu Tian, Jie Yang, Xin Liu, Kai Feng, Jinchao Xua, Min Medical Image Processing Group Key Laboratory of Complex Systems and Intelligence Science Institute of Automation Chinese Academy of Sciences P. O. Box 2728 Beijing 100190 China Life Science Center Xidian University Xi'an Shaanxi 710071 China The College of Electronic Information and Control Engineering Beijing University of Technology Beijing 100124 China

ISBN: (纸本)9780819475138

As a promising optical molecular imaging modality, bioluminescence tomography (BLT) has attracted remarkable attention for its excellent performance and high cost-effectiveness, which can be employed to speciffically and directly reveal physiological and pathological activities in vivo at molecular and cellular levels. The goal of BLT is to reconstruct the internal bioluminescent light source with surface measurements. Therefore, the calculation of surface light exitance plays an important role in the inverse source reconstruction, whereas photon propagation is complicated because of strongly scattering property of the biological tissue. In this contribution, a novel meshless local Petrov-Galerkin (MLPG) method based on diffusion approximation model is developed to avoid the complex and time-consuming mesh division in the conventional finite element method (FEM), and MLPG requires only a series of discretized nodes without consideration of element information and node connectivity. Compared with other meshless methods based on global weak-form, background cells used for Gauss quadrature are also omitted in the proposed method. In addition, the tissue optical parameters are incorporated as a priori knowledge in this algorithm. Finally, the performance of this method is valuated using two- and three-dimensional numerical simulation experiments. The results demonstrate the effectiveness and feasibility of the presented algorithm to predict boundary bioluminescent light power distribution. © 2009 SPIE.

关键词： Finite element method

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Blind separation of superimposed images with unknown motions

Blind separation of superimposed images with unknown motions

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Conference on Computer Vision and Pattern Recognition (CVPR)

作者： Kun Gai Zhenwei Shi Changshui Zhang State Key Laboratory on Intelligent Technology and Systems Tsinghua National Laboratory for Information Science and Technology (TNList) Department of Automation Tsinghua University Beijing China Image Processing Center School of Astronautics Beihang University Beijing China

We consider the blind separation of source layers from superimposed mixtures thereof, involving unknown motions and unknown mixing coefficients of layers in each mixture. Previous blind separation approaches for such problems assume motions to be uniform translations, and hence are limited for real world applications. In this paper, we develop a sparse blind separation algorithm to estimate both parameterized motions and mixing coefficients. Then, a novel reconstruction approach is presented to recover all layers, by utilizing not only the mixing model but also the statistical properties of natural images. The whole method can handle more general motions than translations, including scalings, rotations and other transformations. In addition, the number of layers is automatically identified, and all layers can be recovered even in the under-determined case where mixtures are fewer than layers. The effectiveness of this technology is shown in the experiments on two simulated mixtures of four layers, real photos containing transparency and reflections, and real crossfade images from videos.

关键词： image reconstruction Motion estimation Optical reflection Cameras Laboratories Space technology Parameter estimation Videos Glass Layout

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Improved frame-layer bit allocation scheme for H.264/AVC rate control

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Journal of Shanghai Jiaotong University (Science) 2009年第2期14 E卷 143-148页

作者： Lin, Gui-Xu Zheng, Shi-Bao Zhu, Liang-Jia Institute of Image Communication and Information Processing Department of Electronic Engineering Shanghai Jiaotong University Shanghai 200240 China Shanghai Key Laboratory of Digital Media Processing and Transmissions Shanghai Jiaotong University Shanghai 200240 China Department of Automatic Control National University of Defense Technology Changsha 410073 China

In this paper, we aim at improving the video quality degradation due to high motions or scene changes. An improved frame-layer bit allocation scheme for H.264/AVC rate control is proposed. First, current frame is pre-encoded in 16 × 16 modes with a fixed quantization parameter (QP). The frame coding complexity is then measured based on the resulting bits and peak signal-to-ratio (PSNR) in the pre-coding stage. Finally, a bit budget is calculated for current frame according to its coding complexity and inter-frame PSNR fluctuation, combined with the buffer status. Simulation results show that, in comparison with the H.264 adopted rate control scheme, our method is more efficient to suppress the sharp PSNR drops caused by high motions and scene changes. The visual quality variations in a sequence are also relieved. Copyright.

关键词： Budget control

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Research advances and prospect of spiking neural P systems

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Jisuanji Xuebao/Chinese Journal of Computers 2008年第12期31卷 2090-2096页

作者： Pan, Lin-Qiang Zhang, Xing-Yi Zeng, Xiang-Xiang Wang, Jun Key Laboratory of Image Processing and Intelligent Control Department of Control Science and Engineering Huazhong University of Science and Technology Wuhan 430074 China

Spiking neural P systems are a new computing model inspired from the biological phenomena that in the brain the neurons cooperate to deal with spikes by axons. Since it has been shown that they have powerful computational capability and potential capability in solving computationally hard problems, more and more people begin to get interested in this field. This paper firstly introduces the formal definition of standard spiking neural P systems and some notions which are often used in this area;then, several extensions of the original spiking neural P systems are summarized, that are: Extented SN P system;SN P system with exhaustive use of rules;Asynchronous SN P system;Sequential SN P system. Also, the results on the topic of spiking neural P systems are briefly recalled in two aspects: computational completeness and computational efficiency. In the end, two more important future research directions on spiking neural P systems are pointed out. Specifically, one interesting topic is to develop a new computing model which is more "realistic";another topic is to consider how to use these models in biological modeling and simulation.

关键词： Computational efficiency

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Multisensor image adaptive fusion based on nonsubsampled contourlet

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Jisuanji Xuebao/Chinese Journal of Computers 2009年第11期32卷 2227-2238页

作者： Chang, Xia Jiao, Li-Cheng Jia, Jian-Hua Key Laboratory of Intelligent Perception and Image Understanding of Ministry of Education of China Institute of Intelligent Information Processing Xidian University Xi'an 710071 China School of Information Engineering Jingdezhen Ceramic Institute Jingdezhen Jiangxi 333002 China

An adaptive fusion method of multisensor images based on nonsubsampled contourlet transform is proposed in this paper, which can select the fusion weights of the low-frequency coefficients adaptively via golden section algorithm. The nonsubsampled contourlet transform is a flexible multi-scale, multi-direction and shift-invariant image decomposition, which is suitable for representing images bearing abundant detail and directional information. This is employed for fusing the directional high-frequency coefficients. For the directional high-frequency coefficients, the higher adding level of the directional subbands is used to select the better coefficient for fusion. The nonsubsampled contourlet transform can also avoids introducing ringing artifacts to fused images compared to ordinary method. Experimental results show that the proposed method achieves better fusion efficiency compared to image fusion methods based on Laplacian pyramid transform, wavelet transform, stationary wavelet transform and contourlet transform respectively.

关键词： Contourlet transform

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Directed epileptic network from scalp and intracranial EEG of epileptic patients

Directed epileptic network from scalp and intracranial EEG o...

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IEEE Workshop on Machine Learning for Signal processing

作者： L. Amini C. Jutten S. Achard O. David H. Soltanian-Zadeh G.A. Hossein-Zadeh P. Kahane L. Minotti L. Vercueil Grenoble INP GIPSA Laboratory Grenoble France Grenoble INP GIPSA-LAB Grenoble Cedex France Control and Intelligent Processing Center of Excellence (CIPCE) University of Tehran Tehran Tehran Iran CHUG Neurology Department GIN U836 INSERM Grenoble France Neurology Department CHUG Grenoble France Henry Ford Health System Radiology Image Analysis Laboratory Detroit MI USA

We proposed recently the computation of epileptic connectivity graphs based on wavelet correlation coefficients between EEG signals. The suspected epileptiform electrodes are recognized using the clustering of the topological properties of the graph that can be useful for pre-surgical studies. Here, we present a method for comparing epileptic networks estimated from scalp and intracranial EEG (IEEG) in partial epilepsy patients. The results are presented for a patient with left temporal epilepsy. Good spatial correspondence between the IEEG and the scalp EEG epileptic graphs is obtained. These results are consistent with the patient's clinical diagnosis.

关键词： Epilepsy Scalp Electroencephalography Electrodes Surgery Time frequency analysis Indium phosphide Radio control Process control control systems

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On string languages generated by spiking neural P systems with exhaustive use of rules

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Natural Computing 2008年第4期7卷 535-549页

作者： Zhang, Xingyi Zeng, Xiangxiang Pan, Linqiang Key Laboratory of Image Processing and Intelligent Control Department of Control Science and Engineering Huazhong University of Science and Technology Wuhan 430074 Hubei China

We continue the study of (extended) spiking neural P systems with exhaustive use of rules by considering these computing devices as language generators. Specifically, a step is associated with a symbol according to the number of spikes emitted by the output neuron and the sequence of these symbols associated with a halting computation constitutes a string. Two cases are considered: one of them interprets a step when no spike is emitted as a specified symbol, the other interprets such a step as the empty string. In both cases, it is proved that finite and recursively enumerable languages are characterized by extended spiking neural P systems working in the exhaustive mode. The relationships with regular languages are also investigated. © Springer Science+Business Media B.V. 2008.

关键词： Membrane computing Register machine SN P systems

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Improved taboo search algorithm for designing DNA sequences

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Progress in Natural Science:Materials International 2008年第5期18卷 623-627页

作者： Kai Zhang a, Jin Xu a,b, Xiutang Geng a, Jianhua Xiao a, Linqiang Pana, a The key laboratory of image processing and intelligent control, Department of control Science and Engineering, Huazhong University of Science and Technology, Wuhan 430074, China b School of Electronic Engineering and Computer Science, Peking University, Beijing 100871, China The Key Laboratory of Image Processing and Intelligent Control Department of Control Science and Engineering Huazhong University of Science and Technology Wuhan 430074 China School of Electronic Engineering and Computer Science Peking University Beijing 100871 China

The design of DNA sequences is one of the most practical and important research topics in DNA computing. We adopt taboo search algorithm and improve the method for the systematic design of equal-length DNA sequences, which can satisfy certain combinatorial and thermodynamic constraints. Using taboo search algorithm, our method can avoid trapping into local optimization and can nd a set of good DNA sequences satisfying required constraints.

关键词： DNA computing Taboo search algorithm DNA sequence design

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Predictive protocol of flocks with small-world connection pattern

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Physical Review E 2009年第1期79卷 016113-016113页

作者： Hai-Tao Zhang Michael Z. Q. Chen Tao Zhou The Key Laboratory of Image Processing and Intelligent Control Department of Control Science and Engineering Huazhong University of Science and Technology Wuhan 430074 People's Republic of China Department of Engineering University of Cambridge Cambridge CB2 1PZ United Kingdom Department of Engineering University of Leicester Leicester LE1 7RH United Kingdom Department of Electronic Engineering City University of Hong Kong Kowloon Hong Kong SAR People's Republic of China Department of Modern Physics University of Science and Technology of China Hefei 230026 People’s Republic of China Department of Physics University of Fribourg Chemin du Muse 3 Fribourg CH-1700 Switzerland

By introducing a predictive mechanism with small-world connections, we propose a new motion protocol for self-driven flocks. The small-world connections are implemented by randomly adding long-range interactions from the leader to a few distant agents, namely, pseudoleaders. The leader can directly affect the pseudoleaders, thereby influencing all the other agents through them efficiently. Moreover, these pseudoleaders are able to predict the leader’s motion several steps ahead and use this information in decision making towards coherent flocking with more stable formation. It is shown that drastic improvement can be achieved in terms of both the consensus performance and the communication cost. From the engineering point of view, the current protocol allows for a significant improvement in the cohesion and rigidity of the formation at a fairly low cost of adding a few long-range links embedded with predictive capabilities. Significantly, this work uncovers an important feature of flocks that predictive capability and long-range links can compensate for the insufficiency of each other. These conclusions are valid for both the attractive and repulsive swarm model and the Vicsek model.

关键词： pattern formation protocols random processes 3-DIMENSIONAL LATTICE MODEL DYNAMICAL COMPLEX NETWORKS REPULSIVE INTERACTIONS STABILITY ANALYSIS ATTRACTIVE FORCES SENSOR NETWORKS ANIMAL GROUPS AGENTS TRANSITIONS CONSENSUS

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Multiobjective optimization using an immunodominance and clonal selection inspired algorithm

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Science in China(Series F) 2008年第8期51卷 1064-1082页

作者： GONG MaoGuo JIAO LiCheng MA WenPing DU HaiFeng Key Laboratory of Intelligent Perception and Image Understanding of Ministry of Education of China Institute of Intelligent Information Processing Xidian University Xi'an 710071 China School of Public and Administration Xi'an Jiaotong University Xi'an 710049 China

Based on the mechanisms of immunodominance and clonal selection theory, we propose a new multiobjective optimization algorithm, immune dominance clonal multiobjective algorithm （IDCMA）. IDCMA is unique in that its fitness values of current dominated individuals are assigned as the values of a custom distance measure, termed as Ab-Ab affinity, between the dominated individuals and one of the nondominated individuals found so far. According to the values of Ab-Ab affinity, all dominated individuals （antibodies） are divided into two kinds, subdominant antibodies and cryptic antibodies. Moreover, local search only applies to the subdominant antibodies, while the cryptic antibodies are redundant and have no function during local search, but they can become subdominant （active） antibodies during the subsequent evolution. Furthermore, a new immune operation, clonal proliferation is provided to enhance local search. Using the clonal proliferation operation, IDCMA reproduces individuals and selects their improved maturated progenies after local search, so single individuals can exploit their surrounding space effectively and the newcomers yield a broader exploration of the search space. The performance comparison of IDCMA with MISA, NSGA-Ⅱ, SPEA, PAES, NSGA, VEGA, NPGA, and HLGA in solving six well-known multiobjective function optimization problems and nine multiobjective 0/1 knapsack problems shows that IDCMA has a good performance in converging to approximate Pareto-optimal fronts with a good distribution.

关键词： multiobjective optimization immunodominance clonal selection artificial immune systems evolutionaryalgorithms

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