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检索条件"机构=Informatics and Data Science Program"
288 条 记 录,以下是161-170 订阅
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Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data
Research Square
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Research Square 2021年
作者: Zhang, Martin Jinye Hou, Kangcheng Pasaniuc, Bogdan Price, Alkes L. Dey, Kushal K. Jagadeesh, Karthik A. Weinand, Kathryn Sakaue, Saori Taychameekiatchai, Aris Rao, Poorvi Pisco, Angela Oliveira Zou, James Wang, Bruce Gandal, Michael Raychaudhuri, Soumya Harvard University United States Osaka University Japan Department of Epidemiology Harvard T.H. Chan School of Public Health BostonMA United States Program in Medical and Population Genetics Broad Institute of MIT and Harvard CambridgeMA United States Bioinformatics Interdepartmental Program University of California Los Angeles Los AngelesCA United States Department of Pathology and Laboratory Medicine David Geffen School of Medicine University of California Los Angeles Los AngelesCA United States Department of Computational Medicine David Geffen School of Medicine University of California Los Angeles Los AngelesCA United States Center for Data Sciences Brigham and Women’s Hospital BostonMA United States Division of Genetics Department of Medicine Brigham and Women’s Hospital Harvard Medical School BostonMA United States Division of Rheumatology Inflammation and Immunity Department of Medicine Brigham and Women’s Hospital Harvard Medical School BostonMA United States Department of Biomedical Informatics Harvard Medical School BostonMA United States Department of Medicine and Liver Center University of California San Francisco San FranciscoCA United States Developmental and Stem Cell Biology Graduate Program University of California San Francisco San FranciscoCA United States Chan Zuckerberg Biohub San FranciscoCA United States Department of Electrical Engineering Stanford University Palo AltoCA United States Department of Biomedical Data Science Stanford University Palo AltoCA United States Department of Psychiatry David Geffen School of Medicine University of California Los Angeles Los AngelesCA United States Department of Human Genetics David Geffen School of Medicine University of California Los Angeles Los AngelesCA United States Program in Neurobehavioral Genetics Semel Institute David Geffen School of Medicine University of California Los Angeles Los AngelesCA United States Versus Arthritis Centre for Genetics and Genomic
Gene expression at the individual cell-level resolution, as quantified by single-cell RNA-sequencing (scRNA-seq), can provide unique insights into the pathology and cellular origin of diseases and complex traits. Here... 详细信息
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Mapping of human monoclonal antibody responses to XBB.1.5 COVID-19 monovalent vaccines: a B cell analysis
The Lancet. Microbe
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The Lancet. Microbe 2025年 101103页
作者: Raianna F Fantin Jordan J Clark Hallie Cohn Deepika Jaiswal Bailey Bozarth Vishal Rao Alesandro Civljak Igor Lobo Jessica R Nardulli Komal Srivastava Jeremy S Yong Robert Andreata-Santos Kaitlyn Bushfield Edward S Lee Gagandeep Singh Steven H Kleinstein Florian Krammer Viviana Simon Goran Bajic Camila H Coelho Department of Microbiology Icahn School of Medicine at Mount Sinai New York NY USA Center for Vaccine Research and Pandemic Preparedness Icahn School of Medicine at Mount Sinai New York NY USA. Department of Microbiology Icahn School of Medicine at Mount Sinai New York NY USA. Center for Vaccine Research and Pandemic Preparedness Icahn School of Medicine at Mount Sinai New York NY USA Graduate School of Biomedical Sciences Icahn School of Medicine at Mount Sinai New York NY USA. Retrovirology Laboratory Department of Microbiology Immunology and Parasitology Paulista School of Medicine Federal University of São Paulo São Paulo Brazil. Department of Laboratory Medicine Yale School of Medicine New Haven CT USA Department of Pathology Yale School of Medicine New Haven CT USA. Department of Pathology Yale School of Medicine New Haven CT USA Program in Computational Biology and Biomedical Informatics Yale University New Haven CT USA Department of Immunobiology Yale School of Medicine New Haven CT USA Department of Biomedical Informatics and Data Science Yale School of Medicine New Haven CT USA. Department of Pathology Molecular and Cell-Based Medicine Icahn School of Medicine at Mount Sinai New York NY USA Ignaz Semmelweis Institute Interuniversity Institute for Infection Research Medical University of Vienna Vienna Austria. The Global Health and Emerging Pathogens Institute Icahn School of Medicine at Mount Sinai New York NY USA Division of Infectious Diseases Department of Medicine Icahn School of Medicine at Mount Sinai New York NY USA. Program in Computational Biology and Biomedical Informatics Yale University New Haven CT USA. Electronic address: goran.bajic@mssm.edu. Precision Immunology Institute Icahn School of Medicine at Mount Sinai New York NY USA. Electronic address: camila.coelho@mssm.edu.
BACKGROUND:The rapid emergence of highly transmissible and immune-evasive SARS-CoV-2 variants has required the reformulation of COVID-19 vaccines to target these evolving threats. Although previous infections and boos...
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Democratising Knowledge Representation with BioCypher
arXiv
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arXiv 2022年
作者: Lobentanzer, Sebastian Aloy, Patrick Baumbach, Jan Bohar, Balazs Charoentong, Pornpimol Danhauser, Katharina Doğan, Tunca Dreo, Johann Dunham, Ian Fernandez-Torras, Adrià Gyori, Benjamin M. Hartung, Michael Hoyt, Charles Tapley Klein, Christoph Korcsmaros, Tamas Maier, Andreas Mann, Matthias Ochoa, David Pareja-Lorente, Elena Popp, Ferdinand Preusse, Martin Probul, Niklas Schwikowski, Benno Sen, Bünyamin Strauss, Maximilian T. Turei, Denes Ulusoy, Erva Heidrun Wodke, Judith Andrea Saez-Rodriguez, Julio Heidelberg University Faculty of Medicine Heidelberg University Hospital Institute for Computational Biomedicine Bioquant Heidelberg Germany The Barcelona Institute of Science and Technology Catalonia Barcelona Spain Catalonia Barcelona Spain Institute for Computational Systems Biology University of Hamburg Germany Earlham Institute Norwich United Kingdom Biological Research Centre Szeged Hungary Heidelberg University Im Neuenheimer Feld 267 Heidelberg69120 Germany Im Neuenheimer Feld 460 Heidelberg69120 Germany Department of Pediatrics Dr. von Hauner Children’s Hospital University Hospital LMU Munich Germany Biological Data Science Lab Department of Computer Engineering Hacettepe University Ankara Turkey Department of Bioinformatics Graduate School of Health Sciences Hacettepe University Ankara Turkey Computational Systems Biomedicine Lab Department of Computational Biology Institut Pasteur Université Paris Cité Paris France Bioinformatics and Biostatistics Hub Institut Pasteur Université Paris Cité Paris France Wellcome Genome Campus Cambridgeshire HinxtonCB10 1SD United Kingdom Open Targets Wellcome Genome Campus Cambridgeshire HinxtonCB10 1SD United Kingdom Laboratory of Systems Pharmacology Harvard Medical School Boston United States Imperial College London London United Kingdom Quadram Institute Bioscience Norwich United Kingdom Proteomics Program Novo Nordisk Foundation Centre for Protein Research University of Copenhagen Copenhagen Denmark Department of Proteomics and Signal Transduction Max Planck Institute of Biochemistry Martinsried Germany Im Neuenheimer Feld 460 Heidelberg69120 Germany Neuherberg Germany Medical Informatics Laboratory University Medicine Greifswald Germany
Standardising the representation of biomedical knowledge among all researchers is an insurmountable task, hindering the effectiveness of many computational methods. To facilitate harmonisation and interoperability des... 详细信息
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Automatic Extraction of Medication Mentions from Tweets-Overview of the BioCreative VII Shared Task 3 Competition
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database : the journal of biological databases and curation 2023年 第2023期2023卷 baac108页
作者: Davy Weissenbacher Karen O'Connor Siddharth Rawal Yu Zhang Richard Tzong-Han Tsai Timothy Miller Dongfang Xu Carol Anderson Bo Liu Qing Han Jinfeng Zhang Igor Kulev Berkay Köprü Raul Rodriguez-Esteban Elif Ozkirimli Ammer Ayach Roland Roller Stephen Piccolo Peijin Han V G Vinod Vydiswaran Ramya Tekumalla Juan M Banda Parsa Bagherzadeh Sabine Bergler João F Silva Tiago Almeida Paloma Martinez Renzo Rivera-Zavala Chen-Kai Wang Hong-Jie Dai Luis Alberto Robles Hernandez Graciela Gonzalez-Hernandez Department of Computational Biomedicine Cedars-Sinai Medical Center Los Angeles CA USA. DBEI The Perelman School of Medicine University of Pennsylvania Philadelphia PA USA. Department of Computer Science and Information Engineering National Central University No. 300 Zhongda Rd Zhongli District Taoyuan 320 Taiwan. IoX Center National Taiwan University Da'an District Section 4 Roosevelt Rd No. 1 Barry Lam Hall Taipei 106 Taiwan. Research Center for Humanities and Social Sciences Academia Sinica No. 128 Section 2 Academia Rd Nangang District Taipei 115 Taiwan. Computational Health Informatics Program Boston Children's Hospital Boston MA USA. Department of Pediatrics Harvard Medical School Boston MA USA. NVIDIA Santa Clara CA USA. Department of Statistics Florida State University Tallahassee FL USA. Data and Analytics Chapter F. Hoffmann-La Roche Ltd Switzerland. Pharmaceutical Research and Early Development Roche Innovation Center Basel Switzerland. Speech and Language Technology Lab DFKI Berlin Germany. Department of Biology Brigham Young University Provo UT USA. Department of Computational Medicine and Bioinformatics Medical School University of Michigan Ann Arbor MI USA. Department of Learning Health Sciences Medical School University of Michigan Ann Arbor MI USA. School of Information University of Michigan Ann Arbor MI USA. Department of Computer Science Georgia State University Atlanta GA USA. CLaC Labs Concordia University Montreal Canada. DETI Institute of Electronics and Informatics Engineering of Aveiro University of Aveiro Portugal. Department of Computation University of A Coruña Spain. Computer Science and Engineering Department Universidad Carlos III de Madrid Madrid Spain. Big Data Laboratory Chunghwa Telecom Laboratories Taoyuan Taiwan. Department of Computer Science National Yang Ming Chiao Tung University Hsinchu Taiwan. Department of Electrical Engineering College of Electrical Engineering and Computer Sci
This study presents the outcomes of the shared task competition BioCreative VII (Task 3) focusing on the extraction of medication names from a Twitter user's publicly available tweets (the user's 'timeline...
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JS08.6.A A connectivity signature for glioblastoma
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Neuro-Oncology 2022年 第SUPPLEMENT_2期24卷 ii8-ii9页
作者: Hoffmann, D C Hai, L Wagener, R Mandelbaum, H Xie, R Hausmann, D Dominguez Azorín, D Weil, S Sievers, P Cebulla, G Ito, J Warnken, U Venkataramani, V Ernst, K Reibold, D Will, R Suvà, M L Herold-Mende, C Sahm, F Winkler, F Schlesner, M Wick, W Kessler, T Clinical Cooperation Unit Neurooncology German Cancer Consortium (DKTK) German Cancer Research Center (DKFZ) Heidelberg Germany Department of Neurology and Neurooncology Program National Center for Tumor Diseases Heidelberg University Hospital Heidelberg Germany Faculty of Biosciences Heidelberg University Heidelberg Germany Bioinformatics and Omics Data Analytics DKFZ Heidelberg Germany Department of Neuropathology Institute of Pathology University Hospital Heidelberg Heidelberg Germany Clinical Cooperation Unit Neuropathology DKTK DKFZ Heidelberg Germany Department of Neuroanatomy Institute for Anatomy and Cell Biology Heidelberg University Heidelberg Germany Hopp Children's Cancer Center at the NCT Heidelberg (KiTZ) Heidelberg Germany Division of Pediatric Neurooncology DKTK DKFZ Heidelberg Germany Genomics and Proteomics Core Facility DKTK DKFZ Heidelberg Germany Broad Institute of Harvard and MIT Cambridge MA United States Department of Pathology and Center for Cancer Research Massachusetts General Hospital and Harvard Medical School Boston MA United States Department of Neurosurgery Heidelberg University Hospital Heidelberg Germany Biomedical Informatics Data Mining and Data Analytics Faculty of Applied Computer Science and Medical Faculty University of Augsburg Augsburg Germany
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OPTIMADE, an API for exchanging materials data
arXiv
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arXiv 2021年
作者: Andersen, Casper W. Armiento, Rickard Blokhin, Evgeny Conduit, Gareth J. Dwaraknath, Shyam Evans, Matthew L. Fekete, Ádám Gopakumar, Abhijith Gražulis, Saulius Merkys, Andrius Mohamed, Fawzi Oses, Corey Pizzi, Giovanni Rignanese, Gian-Marco Scheidgen, Markus Talirz, Leopold Toher, Cormac Winston, Donald Aversa, Rossella Choudhary, Kamal Colinet, Pauline Curtarolo, Stefano Di Stefano, Davide Draxl, Claudia Er, Suleyman Esters, Marco Fornari, Marco Giantomassi, Matteo Govoni, Marco Hautier, Geoffroy Hegde, Vinay Horton, Matthew K. Huck, Patrick Huhs, Georg Hummelshøj, Jens Kariryaa, Ankit Kozinsky, Boris Kumbhar, Snehal Liu, Mohan Marzari, Nicola Morris, Andrew J. Mostofi, Arash A. Persson, Kristin A. Petretto, Guido Purcell, Thomas Ricci, Francesco Rose, Frisco Scheffler, Matthias Speckhard, Daniel Uhrin, Martin Vaitkus, Antanas Villars, Pierre Waroquiers, David Wolverton, Chris Wu, Michael Yang, Xiaoyu École Polytechnique Fédérale de Lausanne Lausanne1015 Switzerland Materials Design and Informatics Unit Department of Physics Chemistry and Biology Linköping University Sweden Tilde Materials Informatics Straßmannstraße 25 Berlin10249 Germany Materials Platform for Data Science Sepapaja 6 Tallinn15551 Estonia Theory of Condensed Matter Group Cavendish Laboratory 19 J.J. Thomson Avenue CambridgeCB3 0HE United Kingdom Lawrence Berkeley Labs BerkeleyCA United States Chemin des Étoiles 8 Louvain-la-Neuve1348 Belgium Department of Physics King's College London London United Kingdom Department of Materials Science and Engineering Northwestern University EvanstonIL60208 United States Institute of Biotechnology Life Science Center Vilnius University Saulétekio av. 7 VilniusLT-10257 Lithuania Institute of Computer Science Faculty of Mathematics and Informatics Vilnius University Naugarduko g. 24 VilniusLT-03225 Lithuania Fritz-Haber-Institut der Max-Planck-Gesellschaft Faradayweg 4-6 Berlin14195 Germany Center for Autonomous Materials Design Duke University DurhamNC27708 United States Department of Mechanical Engineering and Materials Science Duke University DurhamNC27708 United States Humboldt-Universität zu Berlin Institut für Physik and IRIS Adlershof Berlin12489 Germany École Polytechnique Fédérale de Lausanne Sion1951 Switzerland Trieste34136 Italy Hermann-von-Helmholtz-Platz 1 Eggenstein-Leopoldshafen76344 Germany Materials Measurement Laboratory National Institute of Standards and Technology GaithersburgMD20899 United States Ansys 300 Rustat House 62 Clifton Rd CambridgeCB1 7EG United Kingdom De Zaale 20 Eindhoven5612 AJ Netherlands Department of Physics and Science of Advanced Materials Program Central Michigan University Mount PleasantMI48859 United States Argonne National Laboratory LemontIL60439 United States Thayer School of Engineering Dartmouth College HanoverNH03755 United States Los AltosCA940
The Open databases Integration for Materials Design (OPTIMADE) consortium has designed a universal application programming interface (API) to make materials databases accessible and interoperable. We outline the first... 详细信息
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High-Throughput Computational Studies in Catalysis and Materials Research, and their Impact on Rational Design
arXiv
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arXiv 2019年
作者: Afzal, Mohammad Atif Faiz Hachmann, Johannes Schrödinger Inc. PortlandOR97204 United States Department of Chemical and Biological Engineering University at Buffalo State University of New York BuffaloNY14260 United States Computational and Data-Enabled Science and Engineering Graduate Program University at Buffalo The State University of New York BuffaloNY14260 United States New York State Center of Excellence in Materials Informatics BuffaloNY14203 United States
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Market Basket Analysis Using Apriori and FP-Growth for Analysis Consumer Expenditure Patterns at Berkah Mart in Pekanbaru Riau
Market Basket Analysis Using Apriori and FP-Growth for Analy...
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2018 Workshop on Multidisciplinary and Its Applications: Applied Mathematics, Computer science, Information Systems, and Information Technology, WMA-Mathcomtech 2018
作者: Mustakim Herianda, Della Maulina Ilham, Ahmad Daeng Gs, Achmad Laumal, Folkes E. Kurniasih, Nuning Iskandar, Akbar Manulangga, Gloria Indra Iswara, Ida Bagus Ary Rahim, Robbi Puzzle Research Data Technology UIN Sultan Syarif Kasim Riau Indonesia Department of Information System UIN Sultan Syarif Kasim Riau Indonesia Informatics Department Universitas Muhammadiyah Semarang Semarang Indonesia Department of Management University of 45 Surabaya Surabaya Indonesia Department of Electrical Engineering Politeknik Negeri Kupang Kupang Indonesia Faculty of Communication Sciences Library and Information Science Program Universitas Padjadjaran Bandung Indonesia Informatics Engineering STMIK AKBA Makassar Indonesia Informatics Department STMIK STIKOM Indonesia Denpasar Indonesia School of Computer and Communication Engineering Universiti Malaysia Perlis Kubang Gajah Malaysia
Berkah Mart is one of the new minimarkets in Pekanbaru city which began to develop as a retail business to meet the needs of the community. In his operation, Berkah Mart still uses the traditional store management per... 详细信息
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Corrigendum to "Investigating nurses' acceptance of patients' bring your own device implementation in a clinical setting: A pilot study" [Asia-Pacific J Oncol Nurs 10 (2023) 100195]
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Asia-Pacific journal of oncology nursing 2024年 第5期11卷 100437页
作者: Shuo-Chen Chien Chun-You Chen Chia-Hui Chien Usman Iqbal Hsuan-Chia Yang Huei-Chia Hsueh Shuen-Fu Weng Wen-Shan Jian Graduate Institute of Biomedical Informatics College of Medical Science and Technology Taipei Medical University Taipei Taiwan. Artificial Intelligence Research and Development Center Wan Fang Hospital Taipei Medical University Taipei Taiwan. International Center for Health Information and Technology College of Medical Science and Technology Taipei Medical University Taipei Taiwan. Department of Radiation Oncology Wan Fang Hospital Taipei Medical University Taipei Taiwan. Office of Public Affairs Taipei Medical University Taipei Taiwan. Health ICT Department of Health Tasmania Australia. Global Health and Health Security Department College of Public Health Taipei Medical University Taipei Taiwan. Department of Artificial Intelligence in Medicine Professional Master Program Taipei Medical University Taipei Taiwan. Department of Pharmacy Taipei Veterans General Hospital Taipei Taiwan. Division of Endocrinology and Metabolism Department of Internal Medicine Taipei Medical University Hospital Taipei Taiwan. Division of Endocrinology and Metabolism Department of Internal Medicine School of Medicine College of Medicine Taipei Medical University Taipei Taiwan. School of Health Care Administration Taipei Medical University Taipei Taiwan. School of Gerontology Health Management College of Nursing Taipei Medical University Taipei Taiwan. Research Center for Artificial Intelligence in Medicine Taipei Medical University Taipei Taiwan. Graduate Institute of Data Science Taipei Medical University Taipei Taiwan.
[This corrects the article DOI: 10.1016/***.2023.100195.].
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Correction: Clinical, social, and policy factors in COVID-19 cases and deaths: methodological considerations for feature selection and modeling in county-level analyses
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BMC public health 2022年 第1期22卷 1250页
作者: Charisse Madlock-Brown Ken Wilkens Nicole Weiskopf Nina Cesare Sharmodeep Bhattacharyya Naomi O Riches Juan Espinoza David Dorr Kerry Goetz Jimmy Phuong Anupam Sule Hadi Kharrazi Feifan Liu Cindy Lemon William G Adams Health Informatics and Information Management University of Tennessee Health Science Center 66 North Pauline St. rm 221 Memphis TN 38163 USA. cmadlock@uthsc.edu. Health Outcomes and Policy Research Program University of Tennessee Health Science Center Memphis TN USA. cmadlock@uthsc.edu. National Institute of Diabetes and Digestive and Kidney Diseases Bethesda MD USA. Medical Informatics and Clinical Epidemiology Oregon Health & Science University Portland OR USA. Biostatistics and Epidemiology Data Analytics Center Boston University Boston MA USA. Department of Statistics Oregon State University Corvallis OR USA. Obstetrics and Gynecology University of Utah School of Medicine Salt Lake City UT USA. Department of Pediatrics Children's Hospital Los Angeles Los Angeles CA USA. National Eye Institute Bethesda MD USA. University of Washington Research Information Technologies Seattle WA USA. Harborview Injury Prevention Research Center Seattle WA USA. Internal Medicine St Joseph Mercy Oakland Hospital Pontiac MI USA. Johns Hopkins School of Public Health Baltimore MD USA. Chan Medical School University of Massachusetts Worcester MA USA. Health Outcomes and Policy Research Program University of Tennessee Health Science Center Memphis TN USA. Boston Medical Center/Boston University School of Medicine Boston MA USA.
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