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2024 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2024

作者： Li, Yichong Liu, Xiaojian Cheng, Fan Pan, Xiaoyong Yang, Yang Shanghai Jiao Tong University Department of Computer Science and Engineering Shanghai200240 China Shanghai Jiao Tong University Institute of Image Processing and Pattern Recognition Shanghai200240 China Ministry of Education of China Key Laboratory of System Control and Information Processing Shanghai200240 China Key Laboratory of Shanghai Education Commission for Intelligent Interaction and Cognitive Engineering Shanghai200240 China

ISBN: (纸本)9798350386226

RNA-binding proteins (RBPs) are essential for gene expression, and the complex RNA-protein interaction mechanisms require analysis of global RNA information. Therefore, accurate prediction of RBP binding sites on full-length RNA transcripts is crucial for understanding these mechanisms and their roles in diseases. While machine learning methods can predict RBP binding to RNA fragments, extending this to full-length transcripts presents challenges due to sequence length and data imbalance. In this paper, we introduce RBP-Former, a binding site joint prediction model designed specifically for full-length RNA transcripts that can be used for multiple RBPs. This model processes information at both coarse and fine-grained levels to fully exploit sequence data and its interactions with multiple RBPs. We develop multi-level imbalance learning strategies, achieving favorable results on imbalanced data. Our method outperforms existing methods in predicting binding sites on full-length RNA transcripts for multiple RBPs, demonstrating its effectiveness in handling imbalanced label and sample distributions. © 2024 IEEE.

关键词： Binding sites

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Relative-Posture-Fixed Model Predictive Human-Following control with Visibility Constraints in Obstacle Environments 8

Relative-Posture-Fixed Model Predictive Human-Following Cont...

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8th IEEE International Conference on Advanced Robotics and Mechatronics, ICARM 2023

作者： Zhang, Yikun Huang, Jian Yu, Jinqi Zhu, Yaonan Hasegawa, Yasuhisa School of Artificial Intelligence and Automation Huazhong University of Science and Technology Key Laboratory for Image Processing and Intelligent Control Wuhan430074 China Shenzhen Huazhong University of Science and Technology Research Institute ShenZhen518060 China Nagoya University Department of Micronano Mechanical Science and Engineering Nagoya464-8603 Japan

ISBN: (纸本)9798350300178

The relative-posture-fixed human following is critical for the human-robot interaction and cooperation in daily scenes such as domestic service and healthcare. However, few of previous researches have discussed the difficulties faced by mobile robots in the real world, including the limitation of sensing range and hindrance from obstacles. For practicality, in this paper we investigate the relative-posture-fixed following control with collision avoidance and visibility constraints. The control task is formulated as a receding-horizon optimization problem and solved under the Nonlinear Model Predictive control (NMPC) framework, while an Extended Kalman Filter (EKF) based human trajectory predict algorithm is integrated into the robot controller. The effectiveness of the proposed algorithm is verified in a simulation, and the results demonstrate a promising performance of our controller for the human-following task in complicated environments. © 2023 IEEE.

关键词： Human robot interaction

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A Speech Cryptosystem Using the New Chaotic System with a Capsule-Shaped Equilibrium Curve

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Computers, Materials & Continua 2023年第6期75卷 5987-6006页

作者： Mohamad Afendee Mohamed Talal Bonny Aceng Sambas Sundarapandian Vaidyanathan Wafaa Al Nassan Sen Zhang Khaled Obaideen Mustafa Mamat Mohd Kamal Mohd Nawawi Faculty of Informatics and Computing Universiti Sultan Zainal AbidinMalaysia Department of Computer Engineering University of SharjahSharjah26666UAE Department of Mechanical Engineering Universitas Muhammadiyah TasikmalayaIndonesia Research and Development Centre Vel Tech UniversityAvadiChennaiIndia School of Artificial Intelligence and Automationand Key Laboratory of Image Processingand Intelligent Control of Education Ministry of ChinaHuazhong University of Scienceand TechnologyWuhan430074China Institute of Strategic Industrial Decision Modeling School of Quantitative SciencesUniversiti Utara Malaysia06010UUM SintokKedahMalaysia

In recent years,there are numerous studies on chaotic systems with special equilibrium curves having various shapes such as circle,butterfly,heart and *** paper describes a new 3-D chaotic dynamical system with a capsule-shaped equilibrium *** proposed chaotic system has two quadratic,two cubic and two quartic nonlinear *** is noted that the proposed chaotic system has a hidden attractor since it has an infinite number of equilibrium *** is also established that the proposed chaotic system exhibits multi-stability with two coexisting chaotic attractors for the same parameter values but differential initial states.A detailed bifurcation analysis with respect to variations in the system parameters is portrayed for the new chaotic system with capsule equilibrium *** have shown MATLAB plots to illustrate the capsule equilibrium curve,phase orbits of the new chaotic system,bifurcation diagrams and *** an engineering application,we have proposed a speech cryptosystem with a numerical algorithm,which is based on our novel 3-D chaotic system with a capsule-shaped equilibrium *** proposed speech cryptosystem follows its security evolution and implementation on Field Programmable Gate Array(FPGA)*** results show that the proposed encryption system utilizes 33%of the FPGA,while the maximum clock frequency is 178.28 MHz.

关键词： Chaos chaotic systems hidden attractors multi-stability bifurcation speech cryptosystem FPGA design

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Adaptive Homophily Clustering: Structure Homophily Graph Learning with Adaptive Filter for Hyperspectral image

arXiv

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arXiv 2025年

作者： Ding, Yao Kang, Weijie Yang, Aitao Zhang, Zhili Zhao, Junyang Feng, Jie Hong, Danfeng Zheng, Qinghe The Key Laboratory of Intelligent Control PLA Rocket Force University of Engineering Xi’an710025 China The Key Laboratory of Intelligent Perception and Image Understanding of Ministry of Education of China Xidian University Xi’an710071 China The Aerospace Information Research Institute Chinese Academy of Sciences Beijing100094 China The School of Electronic Electrical and Communication Engineering University of Chinese Academy of Sciences Beijing100049 China

Hyperspectral image (HSI) clustering has been a fundamental but challenging task with zero training labels. Currently, some deep graph clustering methods have been successfully explored for HSI due to their outstanding performance in effective spatial structural information encoding. Nevertheless, insufficient structural information utilization, poor feature presentation ability, and weak graph update capability limit their performance. Thus, in this paper, a homophily structure graph learning with an adaptive filter clustering method (AHSGC) for HSI is proposed. Specifically, homogeneous region generation is first developed for HSI processing and constructing the original graph. Afterward, an adaptive filter graph encoder is designed to adaptively capture the high and low frequency features on the graph for subsequence processing. Then, a graph embedding clustering self-training decoder is developed with KL Divergence, with which the pseudo-label is generated for network training. Meanwhile, homophily-enhanced structure learning is introduced to update the graph according to the clustering task, in which the orient correlation estimation is adopted to estimate the node connection, and graph edge sparsification is designed to adjust the edges in the graph dynamically. Finally, a joint network optimization is introduced to achieve network self-training and update the graph. The K-means is adopted to express the latent features. Extensive experiments and repeated comparative analysis have verified that our AHSGC contains high clustering accuracy, low computational complexity, and strong robustness. The code source will be available at https://***/DY-HYX. Copyright © 2025, The Authors. All rights reserved.

关键词： Adaptive filters

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SMTC-CL: Continuous Learning via Selective Multi-Task Coordination for Adaptive Signal Classification

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IEEE Transactions on Cognitive Communications and Networking 2024年

作者： Hao, Xiaoyang Yang, Shuyuan Liu, Ruoyu Feng, Zhixi Peng, Tongqing Huang, Bincheng Xidian University Key Laboratory of Intelligent Perception and Image Understanding Ministry of Education School of Artificial Intelligence Xi'an710071 China Avic Xi'an Flight Automatic Control Research Institute China MeiTuan China China Electronics Technology Group Corporation Institute of Information Science and Technology China

Continuously adaptive signal classification in complex electromagnetic environments is a desired property of realistic intelligent systems. However, the limitation of most existing signal processing tasks and methods lies in their assumption of fixed categories and invariant distributions. In contrast, humans naturally acquire knowledge continuously from data streams, enhancing their capabilities through cross-task knowledge integration and learning from the past. Inspired by this, we propose a continuous learning (CL) method based on selective multi-task coordination (SMTC) to deal with ever-changing task categories and distributions in practical electromagnetic environments (denoted as SMTC-CL). Firstly, we propose a signal task distribution comparison (TDC) method that leverages intra-domain density and inter-domain divergence. TDC selectively activates multiple old tasks to collaboration with the current incremental new task. Secondly, we propose the SMTC method. By revisiting potential collaborative tasks from the past using TDC and formulating different selection strategies based on the context, continuous learners can achieve mutual benefits between past and current tasks in SMTC learning. SMTC can partially alleviate catastrophic forgetting and enable continuous learners to adapt to the changing electromagnetic environment. Based on the signal automatic modulation classification (AMC) and real-world specific emitter identification (SEI) datasets, extensive experimental results validate the effectiveness of our proposed method on a variety of CL scenarios, including varying signal task categories, distributions, and their combinations. © 2015 IEEE.

关键词： Contrastive Learning

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Robust flocking for non-identical second-order nonlinear multi-agent systems

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Autonomous intelligent Systems 2021年第1期1卷 81-90页

作者： Xiuxian Li Housheng Su Li Li Department of Control Science and Engineering College of Electronics and Information Engineeringand Shanghai Research Institute for Intelligent Autonomous SystemsTongji UniversityShanghai 200092China Institute for Advanced Study Tongji UniversityShanghai 200092China School of Automation Image Processing and Intelligent Control Key Laboratory of Education Ministry of ChinaHuazhong University of Science and TechnologyLuoyu Road 1037Wuhan 430074China

This paper investigates the robust flocking problem for second-order nonlinear systems with a leader and external *** contrast with most of second-order systems in the literature,the intrinsic dynamics here are nonlinear and non-identical that depend not only on the velocity but also on the position,which is more ***,the interaction topology is undirected and *** that the leader’s velocity may be constant or time-varying,two distributed flocking control laws have been proposed for two cases to make the differences of the velocities between all followers and the leader approach to zero *** proposed distributed flocking control laws are both model-independent which results in the effectiveness of the controllers to cope with the different intrinsic dynamics of the followers and the leader under some assumptions on boundedness of several *** example is given to illustrate the validity of the theoretical results.

关键词： Flocking Multi-agent systems Second-order nonlinear systems Non-identical dynamics

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Parametric Transformation of Timed Weighted Marked Graphs:Applications in Optimal Resource Allocation

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IEEE/CAA Journal of Automatica Sinica 2021年第1期8卷 179-188页

作者： Zhou He Ziyue Ma Zhiwu Li Alessandro Giua the College of Mechanical and Electrical Engineering Shaanxi University of Science and TechnologyXi’an 710021China Shaanxi Key Laboratory of Complex System Control and Intelligent Information Processing Xi’an University of TechnologyXi’an 710048China the School of Electro-Mechanical Engineering Xidian UniversityXi’an 710071China Institute of Systems Engineering Macao University of Science and TechnologyTaipa 999078MacaoChina the Department of Electrical and Electronic Engineering University of CagliariCagliari 09124Italy

Timed weighted marked graphs are a subclass of timed Petri nets that have wide applications in the control and performance analysis of flexible manufacturing *** to the existence of multiplicities(i.e.,weights)on edges,the performance analysis and resource optimization of such graphs represent a challenging *** this paper,we develop an approach to transform a timed weighted marked graph whose initial marking is not given,into an equivalent parametric timed marked graph where the edges have unitary *** order to explore an optimal resource allocation policy for a system,an analytical method is developed for the resource optimization of timed weighted marked graphs by studying an equivalent ***,we apply the proposed method to a flexible manufacturing system and compare the results with a previous heuristic *** analysis shows that the developed approach is superior to the heuristic approach.

关键词： Discrete event system resource allocation timed Petri net weighted marked graph

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CAT: a coarse-to-fine attention tree for semantic change detection

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Visual Intelligence 2023年第1期1卷 1-12页

作者： Wei, Xiu-Shen Xu, Yu-Yan Zhang, Chen-Lin Xia, Gui-Song Peng, Yu-Xin School of Computer Science and Engineering Nanjing University of Science and Technology Nanjing China State Key Laboratory of Integrated Services Networks Xidian University Xi’an China Key Lab of Intelligent Perception and Systems for High-Dimensional Information of Ministry of Education and Jiangsu Key Lab of Image and Video Understanding for Social Security Nanjing China 4Paradigm Inc Beijing China School of Computer Science and Institute of Artificial Intelligence Wuhan University Wuhan China Wangxuan Institute of Computer Technology Peking University Beijing China

Semantic change detection (SCD) and land cover mapping (LCM) are always treated as a dual task in the field of remote sensing. However, due to diverse real-world scenarios, many SCD categories are not easy to be clearly recognized, such as “water-vegetation” and “water-tree”, which can be regarded as fine-grained differences. In addition, even a single LCM category is usually difficult to define. For instance, some “vegetation” categories with litter vegetation coverage are easily confused with the general “ground” category. SCD/LCM becomes challenging under both challenges of its fine-grained nature and label ambiguity. In this paper, we tackle the SCD and LCM tasks simultaneously by proposing a coarse-to-fine attention tree (CAT) model. Specifically, it consists of an encoder, a decoder and a coarse-to-fine attention tree module. The encoder-decoder structure extracts the high-level features from input multi-temporal images first and then reconstructs them to return SCD and LCM predictions. Our coarse-to-fine attention tree, on the one hand, utilizes the tree structure to better model a hierarchy of categories by predicting the coarse-grained labels first and then predicting the fine-grained labels later. On the other hand, it applies the attention mechanism to capture discriminative pixel regions. Furthermore, to address label ambiguity in SCD/LCM, we also equip a label distribution learning loss upon our model. Experiments on the large-scale SECOND dataset justify that the proposed CAT model outperforms state-of-the-art models. Moreover, various ablation studies have demonstrated the effectiveness of tailored designs in the CAT model for solving semantic change detection problems. © The Author(s) 2023.

关键词： Attention tree Coarse-to-fine Fine-grained recognition Label ambiguity Semantic change detection

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Causal Invariant Hierarchical Molecular Representation for Out-of-distribution Molecular Property Prediction

Causal Invariant Hierarchical Molecular Representation for O...

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2024 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2024

作者： Wen, Xinlong Guo, Yifei Wei, Shuoying Long, Wenhan Zhu, Lida Zhu, Rongbo College of Informatics Huazhong Agricultural University Wuhan430070 China Shenzhen Institute of Nutrition and Health Huazhong Agricultural University Shenzhen518000 China Shenzhen Branch Guangdong Laboratory for Lingnan Modern Agriculture Genome Analysis Laboratory of the Ministry of Agriculture Agricultural Genomics Institute at Shenzhen Chinese Academy of Agricultural Sciences Shenzhen518000 China Engineering Research Center of Intelligent Technology for Agriculture Ministry of Education Hubei Wuhan430074 China Key Laboratory of Ministry of Education for Image Processing and Intelligent Control School of Artificial Intelligence and Automation Huazhong University of Science and Technology Hubei Wuhan430074 China

ISBN: (纸本)9798350386226

Molecular representation learning is widely used in the field of drug discovery, due to its ability to accurately capture the complex features of compounds in high-dimensional space. However, existing molecular representation learning models are prone to be influenced by spurious parts during distribution shifts (also known as out-of-distribution, or OOD), which results in models mistakenly treating these spurious parts as crucial features of molecules, thereby limiting the generalization capability of the models. To tackle this issue, a novel invariant molecular representation learning model, called Causal Invariant Hierarchical Molecular Representation Graph Neural Networks (CHiMoGNN), is proposed for OOD molecular property prediction. In CHiMoGNN, a Feature Enhancement (FE) module is designed to leverage the multi-level molecular parts to enhance the expression of invariant features, thereby enhancing the model's capability to capture key molecular information. In addition, a Cartesian Product based Environmental Impact (EI) module is adopted to generate counterfactual samples with environmental diversity. Consequently, these samples are utilized to train a classifier that maintains consistent performance across various environments. Extensive experiments on seven real-world datasets demonstrate that CHiMoGNN outperforms 9 state-of-the-art models, achieving a 5.73% increase in average ROC-AUC, and the results also show that CHiMoGNN can effectively maintain generalization in various distribution shifts. Code and datasets are available at https://***/Chertuion/CHiMoGNN. © 2024 IEEE.

关键词： Graph neural networks

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Distributed Resource Allocation via Accelerated Saddle Point Dynamics

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IEEE/CAA Journal of Automatica Sinica 2021年第9期8卷 1588-1599页

作者： Wen-Ting Lin Yan-Wu Wang Chaojie Li Xinghuo Yu School of Artificial Intelligence and Automation Huazhong University of Science and TechnologyWuhan 430074 Key Laboratory of Image Processing and Intelligent Control Ministry of EducationHuazhong University of Science and TechnologyWuhan 430074China School of Electrical Engineering and Telecommunications University of New South WalesSydney NSW 2052Australia School of Engineering Royal Melbourne Institute of Technology(RMIT University)Melbourne VIC 3000Australia

In this paper,accelerated saddle point dynamics is proposed for distributed resource allocation over a multi-agent network,which enables a hyper-exponential convergence ***,an inertial fast-slow dynamical system with vanishing damping is introduced,based on which the distributed saddle point algorithm is *** dual variables are updated in two time scales,i.e.,the fast manifold and the slow *** the fast manifold,the consensus of the Lagrangian multipliers and the tracking of the constraints are pursued by the consensus *** the slow manifold,the updating of the Lagrangian multipliers is accelerated by inertial ***-exponential stability is defined to characterize a faster convergence of our proposed algorithm in comparison with conventional primal-dual algorithms for distributed resource *** simulation of the application in the energy dispatch problem verifies the result,which demonstrates the fast convergence of the proposed saddle point dynamics.

关键词： Accelerated saddle point dynamic distributed resource allocation hyper-exponential stability power dispatch

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