检索结果-内蒙古大学图书馆

arXiv 2024年

作者： Wang, Chong Li, Mengyao He, Junjun Wang, Zhongruo Darzi, Erfan Chen, Zan Ye, Jin Li, Tianbin Su, Yanzhou Ke, Jing Qu, Kaili Li, Shuxin Yu, Yi Liò, Pietro Wang, Tianyun Wang, Yu Guang Shen, Yiqing School of Medical Engineering Xinxiang Medical University Xinxiang China Engineering Technology Research Center of Neurosense and Control of Henan Province Xinxiang China Henan International Joint Laboratory of Neural Information Analysis and Drug Intelligent Design Xinxiang China Shanghai AI Laboratory Shanghai China Amazon Palo AltoCA United States Boston Children's Hospital MA United States Harvard Medical School Harvard University MA United States Toursun Synbio Shanghai China Department of Data Science & AI Faculty of IT Monash University Melbourne Australia School of Electronic Information and Electrical Engineering Shanghai Jiao Tong University Shanghai China School of Computer Science and Engineering University of New South Wales Sydney Australia Department of Computer Science and Technology University of Cambridge Cambridge United Kingdom School of Basic Medical Sciences Xinxiang Medical University Xinxiang China Institute of Natural Sciences Shanghai Jiao Tong University Shanghai China School of Mathematics and Statistics University of New South Wales Sydney Australia Department of Computer Science Johns Hopkins University MD United States

Recent breakthroughs in large language models (LLMs) offer unprecedented natural language understanding and generation capabilities. However, existing surveys on LLMs in biomedicine often focus on specific applications or model architectures, lacking a comprehensive analysis that integrates the latest advancements across various biomedical domains. This review, based on an analysis of 484 publications sourced from databases including PubMed, Web of Science, and arXiv, provides an in-depth examination of the current landscape, applications, challenges, and prospects of LLMs in biomedicine, distinguishing itself by focusing on the practical implications of these models in real-world biomedical contexts. Firstly, we explore the capabilities of LLMs in zero-shot learning across a broad spectrum of biomedical tasks, including diagnostic assistance, drug discovery, and personalized medicine, among others, with insights drawn from 137 key studies. Then, we discuss adaptation strategies of LLMs, including fine-tuning methods for both uni-modal and multi-modal LLMs to enhance their performance in specialized biomedical contexts where zero-shot fails to achieve, such as medical question answering and efficient processing of biomedical literature. Finally, we discuss the challenges that LLMs face in the biomedicine domain including data privacy concerns, limited model interpretability, issues with dataset quality, and ethics due to the sensitive nature of biomedical data, the need for highly reliable model outputs, and the ethical implications of deploying AI in healthcare. To address these challenges, we also identify future research directions of LLM in biomedicine including federated learning methods to preserve data privacy and integrating explainable AI methodologies to enhance the transparency of LLMs. As this field of LLM rapidly evolves, continued research and development are essential to fully harness the capabilities of LLMs in biomedicine while ensuring their respon

关键词： Federated learning

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Hypercomplex Low Rank Reconstruction for Nmr Spectroscopy with Cloud Computing ⋆

SSRN

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SSRN 2022年

作者： Guo, Yi Zhan, Jiaying Tu, Zhangren Zhou, Yirong Wu, Jianfan Hong, Qing Orekhov, Vladislav Qu, Xiaobo Guo, Di School of Computer and Information Engineering Fujian Engineering Research Center for Medical Data Mining and Application Xiamen University of Technology Xiamen361024 China Department of Electronic Science Biomedical Intelligent Cloud R&D Center Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance Xiamen University Xiamen361005 China China Mobile Group Xiamen361005 China Swedish NMR Center Department of Chemistry and Molecular Biology University of Gothenburg Gothenburg41390 Sweden

Nuclear magnetic resonance (NMR) spectroscopy serves as an important tool to analyze chemicals and proteins in bioengineering. Multi-dimensional NMR offers a major improvement in resolution with multi-dimensional spectrum, but significantly increases data acquisition time and produces hypercomplex data that is difficult to be handled. To reduce this time, non-uniformly sampling can be applied to obtain undersampled data and using a reconstruction approach, such as the state-of-the-art low-rank method, to remove the spectral artifacts introduced by undersampling. However, only complex format of signal, including the real and imaginary parts, is considered in previous low-rank approach, which is less efficient when dealing with hypercomplex data that has multiple components. To deal with this problem, a hypercomplex low-rank model is proposed by introducing an adjoint matrix operation and then solved with a fast matrix factorization algorithm. This method efficiently uses redundant information among all the components of hypercomplex signal. Using simulated data and real protein data, we demonstrate that the proposed method provides a fast and high-fidelity reconstruction of hypercomplex NMR spectroscopy. Furthermore, an open-access and easy-to-use cloud-computing platform is developed for this method. © 2022, The Authors. All rights reserved.

关键词： Nuclear magnetic resonance spectroscopy

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Energy Efficient Train-Ground mmWave Mobile Relay System for High Speed Railways

arXiv

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arXiv 2022年

作者： Wang, Lei Ai, Bo Niu, Yong Zhong, Zhangdui Mao, Shiwen Wang, Ning Han, Zhu The State Key Laboratory of Rail Traffic Control and Safety Beijing Jiaotong University Beijing100044 China Beijing Engineering Research Center of High-speed Railway Broadband Mobile Communications Beijing Jiaotong University Beijing100044 China Peng Cheng Laboratory Henan Joint International Research Laboratory of Intelligent Networking and Data Analysis Zhengzhou University Zhengzhou450001 China The National Mobile Communications Research Laboratory Southeast University Nanjing211189 China The Department of Electrical and Computer Engineering Auburn University AuburnAL36949-5201 United States The School of Information Engineering Zhengzhou University Zhengzhou450001 China The Department of Electrical and Computer Engineering The University of Houston HoustonTX77004 United States The Department of Computer Science and Engineering Kyung Hee University Seoul446-701 Korea Republic of

The rapid development of high-speed railways (HSRs) puts forward high requirements on the corresponding communication system. Millimeter wave (mmWave) can be a promising solution due to its wide bandwidth, narrow beams, and rich spectrum resources. However, with the large number of antenna elements employed, energy-efficient solutions at mmWave frequencies are in great demand. Based on a mmWave HSR communication system with multiple mobile relays (MRs) on top of the train, a dynamic power-control scheme for train-ground communications is proposed. The scheme follows the regular movement characteristics of high-speed trains and considers three phases of train movement: the train enters the cell, all MRs are covered in the cell, and the train leaves the cell. The transmit power is further refined according to the number of MRs in the cell and the distance between the train and the remote radio head. By minimizing energy consumption under the constraints of the transmitted data and transmit power budget, the transmit power is allocated to multiple MRs through the multiplier punitive function-based algorithm. Comprehensive simulation results, where the velocity estimation error is taken into account, are provided to demonstrate the effectiveness of the proposed scheme over several baseline schemes. Copyright © 2022, The Authors. All rights reserved.

关键词： Energy efficiency

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Tumor Detection, Segmentation and Classification Challenge on Automated 3D Breast Ultrasound: The TDSC-ABUS Challenge

arXiv

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arXiv 2025年

作者： Luo, Gongning Xu, Mingwang Chen, Hongyu Liang, Xinjie Tao, Xing Ni, Dong Jeong, Hyunsu Kim, Chulhong Stock, Raphael Baumgartner, Michael Kirchhoff, Yannick Rokuss, Maximilian Maier-Hein, Klaus Yang, Zhikai Fan, Tianyu Boutry, Nicolas Tereshchenko, Dmitry Moine, Arthur Charmetant, Maximilien Sauer, Jan Du, Hao Bai, Xiang-Hui Raikar, Vipul Pai Montoya-Del-Angel, Ricardo Martí, Robert Luna, Miguel Lee, Dongmin Qayyum, Abdul Mazher, Moona Guo, Qihui Wang, Changyan Awasthi, Navchetan Zhao, Qiaochu Wang, Wei Wang, Kuanquan Wang, Qiucheng Dong, Suyu School of Computer Science and Technology Harbin Institute of Technology Harbin150001 China Department of Mathematics Faculty of Science National University of Singapore Singapore National-Regional Key Technology Engineering Laboratory for Medical Ultrasound School of Biomedical Engineering Shenzhen University Medical School Shenzhen University Shenzhen China Laboratory Shenzhen University Shenzhen China School of Biomedical Engineering and Informatics Nanjing Medical University Nanjing China Pohang Korea Republic of Heidelberg Division of Medical Image Computing Heidelberg Germany Faculty of Mathematics and Computer Science Heidelberg University Germany Heidelberg Germany HIDSS4Health - Helmholtz Information and Data Science School for Health Karlsruhe Heidelberg Germany Pattern Analysis and Learning Group Department of Radiation Oncology Heidelberg University Hospital Germany Department of Biomedical Engineering and Health KTH Royal Institute of Technology Stockholm Sweden France FathomX Singapore Saw Swee Hock School of Public Health National University of Singapore Singapore Philips Research University of Girona Spain Department of Robotics and Mechatronics Engineering DGIST Korea Republic of Department of Interdisciplinary Studies of Artificial Intelligence DGIST Korea Republic of National Heart and Lung Institute Faculty of Medicine Imperial College London London United Kingdom Centre for Medical Image Computing Department of Computer Science University College London London United Kingdom Lab School of Communication and Information Engineering Shanghai University Shanghai China Faculty of Science Mathematics and Computer Science Informatics Institute University of Amsterdam Amsterdam1090 GH Netherlands Department of Biomedical Engineering and Physics Amsterdam UMC Amsterdam1081 HV Netherlands Xi’an Jiaotong-Liverpool University China Department of Ultrasound Harbin Medical University Cancer Hospital No. 150 Haping Road Nangang

Breast cancer is one of the most common causes of death among women worldwide. Early detection helps in reducing the number of deaths. Automated 3D Breast Ultrasound (ABUS) is a newer approach for breast screening, which has many advantages over handheld mammography such as safety, speed, and higher detection rate of breast cancer. Tumor detection, segmentation, and classification are key components in the analysis of medical images, especially challenging in the context of 3D ABUS due to the significant variability in tumor size and shape, unclear tumor boundaries, and a low signal-to-noise ratio. The lack of publicly accessible, well-labeled ABUS datasets further hinders the advancement of systems for breast tumor analysis. Addressing this gap, we have organized the inaugural Tumor Detection, Segmentation, and Classification Challenge on Automated 3D Breast Ultrasound 2023 (TDSC-ABUS2023). This initiative aims to spearhead research in this field and create a definitive benchmark for tasks associated with 3D ABUS image analysis. In this paper, we summarize the top-performing algorithms from the challenge and provide critical analysis for ABUS image examination. We offer the TDSC-ABUS challenge as an open-access platform at https://***/ to benchmark and inspire future developments in1algorithmic research. © 2025, CC BY.

关键词： Image segmentation

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AppQ: Warm-starting app recommendation based on view graphs

arXiv

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arXiv 2021年

作者： Su, Dan Liu, Jiqiang Zhu, Sencun Wang, Xiaoyang Wang, Wei Zhang, Xiangliang Beijing Key Laboratory of Security and Privacy in Intelligent Transportation Beijing Jiaotong University Beijing China Department of Computer Science and Engineering Pennsylvania State University PA United States Beijing Key Laboratory of Traffic Data Analysis and Mining Beijing Jiaotong University Beijing China Thuwal Saudi Arabia

Current app ranking and recommendation systems are mainly based on user-generated information, e.g., number of downloads and ratings. However, new apps often have few (or even no) user feedback, suffering from the classic cold-start problem. How to quickly identify and then recommend new apps of high quality is a challenging issue. Here, a fundamental requirement is the capability to accurately measure an app’s quality based on its inborn features, rather than user-generated features. Since users obtain first-hand experience of an app by interacting with its views, we speculate that the inborn features are largely related to the visual quality of individual views in an app and the ways the views switch to one another. In this work, we propose AppQ, a novel app quality grading and recommendation system that extracts inborn features of apps based on app source code. In particular, AppQ works in parallel to perform code analysis to extract app-level features as well as dynamic analysis to capture view-level layout hierarchy and the switching among views. Each app is then expressed as an attributed view graph, which is converted into a vector and fed to classifiers for recognizing its quality classes. Our evaluation with an app dataset from Google Play reports that AppQ achieves the best performance with accuracy of 85.0%. This shows a lot of promise to warm-start app grading and recommendation systems with *** Codes D.0 © 2021, CC BY-NC-ND.

关键词： Recommender systems

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Classification of Awareness in Disorders of Consciousness Using Common Spatial Pattern

Classification of Awareness in Disorders of Consciousness Us...

引用

International Winter Workshop on Brain-computer Interface (BCI)

作者： Chaewon Lee Sunho Lee Jitka Annen Ji-Hoon Jeong Marcello Massimini Silvia Casarotto Melanie Boly Olivier Bodart Aurore Thibaut Mario Rosanova Steven Laureys Olivia Gosseries Minji Lee Dept. Data Science The Catholic University of Korea Bucheon Republic of Korea Dept. Biomedical Software Engineering The Catholic University of Korea Bucheon Republic of Korea Dept. GIGA-Research & Neurology University and University Hospital of Liege Liege Belgium Dept. Data Analysis University of Ghent Ghent Belgium Dept. Computer Science Chungbuk National University Cheongju Republic of Korea Dept. Biomedical and Clinical Sciences “L. Sacco” University of Milan Milan Italy Dept. Psychiatry Wisconsin Institute for Sleep and Consciousness University of Wisconsin Madison USA Coma Science Group GIGA-Consciousness GIGA Research Center University of Liège Liège Belgium Centre du Cerveau Neurology department University Hospital of Liège Liège Belgium

ISBN: (数字)9798331521929

ISBN: (纸本)9798331521936

Advances in intensive care have improved the survival rate of patients with severe acute brain injury, but diagnostic errors for patients with disorders of consciousness are still high. Accurate diagnosis of these patients is very important because effective treatment can vary depending on the diagnosis. In this study, we propose a framework for classifying unresponsive wakefulness syndrome and minimally conscious state, focusing on awareness. In particular, power spectral density and common spatial patterns were used together, considering that spatial information is a key feature in consciousness. The 16 patients with unresponsive wakefulness syndrome and 14 with minimally conscious state underwent resting-state electroencephalography measurements. In addition, we compared the performance by utilizing each frequency (delta, theta, alpha, beta, gamma bands) related to consciousness. As a result, the highest accuracy of 95.06% was achieved by the EEGNet classifier, especially in the beta frequency band. We demonstrated that spatial information is very important in consciousness, as we observed that classification performance improved when common spatial patterns were used. These results provide insight into various frameworks for diagnosing patients with disorders of consciousness and may help patients survive by increasing the diagnosis rate in the future.

关键词： Deep learning Accuracy Biological system modeling Pattern classification Focusing Signal processing Brain modeling Particle measurements Electroencephalography Robustness

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Progressive Dual Priori Network for Generalized Breast Tumor Segmentation

arXiv

引用

arXiv 2023年

作者： Wang, Li Wang, Lihui Kuai, Zixiang Tang, Lei Ou, Yingfeng Ye, Chen Zhu, Yuemin Wu, Min Shi, Tianliang Engineering Research Center of Text Computing & Cognitive Intelligence Ministry of Education Key Laboratory of Intelligent Medical Image Analysis and Precise Diagnosis of Guizhou Province State Key Laboratory of Public Big Data College of Computer Science and Technology Guizhou University Guiyang550025 China Imaging Center Harbin Medical University Cancer Hospital Harbin150081 China Radiology Department Guizhou Provincial People’s Hospital Guiyang550002 China Radiology Department Tongren People’s Hospital Tongren554300 China Univ Lyon INSA Lyon CNRS Inserm CREATIS UMR 5220 U1206 LyonF-69621 France

To promote the generalization ability of breast tumor segmentation models, as well as to improve the segmentation performance for breast tumors with smaller size, low-contrast and irregular shape, we propose a progressive dual priori network (PDPNet) to segment breast tumors from dynamic enhanced magnetic resonance images (DCE-MRI) acquired at different centers. The PDPNet first cropped tumor regions with a coarse-segmentation based localization module, then the breast tumor mask was progressively refined by using the weak semantic priori and cross-scale correlation prior knowledge. To validate the effectiveness of PDPNet, we compared it with several state-of-the-art methods on multi-center datasets. The results showed that, comparing against the suboptimal method, the DSC and HD95 of PDPNet were improved at least by 5.13% and 7.58% respectively on multi-center test sets. In addition, through ablations, we demonstrated that the proposed localization module can decrease the influence of normal tissues and therefore improve the generalization ability of the model. The weak semantic priors allow focusing on tumor regions to avoid missing small tumors and low-contrast tumors. The cross-scale correlation priors are beneficial for promoting the shape-aware ability for irregular tumors. Thus integrating them in a unified framework improved the multicenter breast tumor segmentation performance. The source code and open data can be accessed at https://github. com/wangli100209/PDPNet. Copyright © 2023, The Authors. All rights reserved.

关键词： Magnetic resonance

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Energy-Efficient Cell-Free Massive MIMO Through Sparse Large-Scale Fading Processing

arXiv

引用

arXiv 2022年

作者： Chen, Shuaifei Zhang, Jiayi Björnson, Emil Demir, Özlem Tuğfe Ai, Bo The School of Electronic and Information Engineering The Frontiers Science Center for Smart Highspeed Railway System Beijing Jiaotong University Beijing100044 China Purple Mountain Laboratories Nanjing211111 China The Department of Computer Science KTH Royal Institute of Technology Kista164 40 Sweden The Department of Electrical and Electronics Engineering TOBB University of Economics and Technology Ankara Turkey The State Key Laboratory of Rail Traffic Control and Safety Beijing Jiaotong University Beijing100044 China The Henan Joint International Research Laboratory of Intelligent Networking and Data Analysis Zhengzhou University Zhengzhou450001 China

Cell-free massive multiple-input multiple-output (CF mMIMO) systems serve the user equipments (UEs) by geographically distributed access points (APs) by means of joint transmission and reception. To limit the power consumption due to fronthaul signaling and processing, each UE should only be served by a subset of the APs, but it is hard to identify that subset. Previous works have tackled this combinatorial problem heuristically. In this paper, we propose a sparse distributed processing design for CF mMIMO, where the AP-UE association and long-term signal processing coefficients are jointly optimized. We formulate two sparsity-inducing mean-squared error (MSE) minimization problems and solve them by using efficient proximal approaches with block-coordinate descent. For the downlink, more specifically, we develop a virtually optimized large-scale fading precoding (V-LSFP) scheme using uplink-downlink duality. The numerical results show that the proposed sparse processing schemes work well in both uplink and downlink. In particular, they achieve almost the same spectral efficiency as if all APs would serve all UEs, while the energy efficiency is 2-4 times higher thanks to the reduced processing and signaling. Copyright © 2022, The Authors. All rights reserved.

关键词： Energy efficiency

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Joint User Association and Transmission Scheduling in Integrated mmWave Access and Terahertz Backhaul Networks

arXiv

引用

arXiv 2023年

作者： Wang, Lei Ai, Bo Niu, Yong Jiang, Haiyan Mao, Shiwen Zhong, Zhangdui Wang, Ning The State Key Laboratory of Advanced Rail Autonomous Operation The Beijing Engineering Research Center of High-Speed Railway Broadband Mobile Communications Beijing Jiaotong University Beijing100044 China The State Key Laboratory of Advanced Rail Autonomous Operation Beijing Jiaotong University Beijing100044 China The Research Center of Networks and Communications Peng Cheng Laboratory Shenzhen518055 China The Henan Joint International Research Laboratory of Intelligent Networking and Data Analysis Zhengzhou University Zhengzhou450001 China The National Mobile Communications Research Laboratory Southeast University Nanjing211189 China The Department of Electrical and Computer Engineering Auburn University AuburnAL36849-5201 United States The School of Information Engineering Zhengzhou University Zhengzhou450001 China

Terahertz wireless backhaul is expected to meet the high-speed backhaul requirements of future ultra-dense networks using millimeter-wave (mmWave) base stations (BSs). In order to achieve higher network capacity with limited resources and meet the quality of service (QoS) requirements of more users in the integrated mmWave access and terahertz backhaul network, this paper formulates a problem of maximizing the number of users successfully served in both the access and backhaul links. Since the problem is a non-linear integer optimization problem, a minimum rate ratio user association and transmission scheduling algorithm is proposed to obtain a suboptimal solution. The proposed algorithm takes the minimum rate ratio as the user association criterion and schedules first the users with fewer backhaul transmission slots. In addition, the algorithm will update the number of access transmission slots allocated to users and the access scheduling results after the backhaul scheduling phase. Numerical results show that the proposed algorithm outperforms several benchmark algorithms in terms of the number of served users and system throughput, and it can cope with a large number of bursty user requests. Copyright © 2023, The Authors. All rights reserved.

关键词： Millimeter waves

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CloudBrain-ReconAI: A Cloud Computing Platform for MRI Reconstruction and Radiologists’ Image Quality Evaluation

arXiv

引用

arXiv 2022年

作者： Zhou, Yirong Qian, Chen Li, Jiayu Wang, Zi Hu, Yu Qu, Biao Zhu, Liuhong Zhou, Jianjun Kang, Taishan Lin, Jianzhong Hong, Qing Dong, Jiyang Guo, Di Qu, Xiaobo The Department of Electronic Science Biomedical Intelligent Cloud R&D Center Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance National Institute for Data Science in Health and Medicine Xiamen University Xiamen361102 China The Department of Instrumental and Electrical Engineering Xiamen University Xiamen361005 China Fudan University Xiamen361015 China The Department of Radiology Zhongshan Hospital Xiamen University School of Medicine Xiamen University Xiamen361004 China The China Mobile Group Xiamen361000 China The School of Computer and Information Engineering Xiamen University of Technology Xiamen361024 China

Efficient collaboration between engineers and radiologists is important for image reconstruction algorithm development and image quality evaluation in magnetic resonance imaging (MRI). Here, we develop CloudBrain-ReconAI, an online cloud computing platform, for algorithm deployment, fast and blind reader study. This platform supports online image reconstruction using state-of-the-art artificial intelligence and compressed sensing algorithms with applications for fast imaging (Cartesian and non-Cartesian sampling) and high-resolution diffusion imaging. Through visiting the website, radiologists can easily score and mark images. Then, automatic statistical analysis will be provided. CloudBrain-ReconAI is now open accessed at https://***/*** and will be continually improved to serve the MRI research community. Copyright © 2022, The Authors. All rights reserved.

关键词： Cloud platforms

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