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2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023

作者： Wang, Han Zhao, Jingtong Wang, Shengkun He, Zhiquan Ouyang, Xike Gao, Ting Northeast Normal University School of Information Science and Technology Changchun China Shenzhen University Guangdong Key Laboratory of Intelligent Information Processing Shenzhen China

ISBN: (纸本)9798350337488

Predicting protein-ligand binding affinity is important in areas such as drug discovery, gene regulation and signal transduction. The DTA(Drug-Target Affinity) method based on protein structure can not only effectively compensates for the lack of binding information, but also more in line with real biological processes. Although the structure-based DTA methods have achieved good performance, the existing methods still have the problem of only considering single-scale structural features and ignoring multi-scale structural features. In order to solve this problem, we propose the MSSDTA (Multi-Scale Structural Representation Drug-Target Affinity Prediction), which extracts multi-scale protein features by integrating the surface node features and structural node features of proteins. At the same time, the drug representation network is used to fuse the 2D molecular structure characteristics and chemical characteristics of the drug to effectively distinguish the drug molecules with similar planar structures. Finally, the affinity prediction network is used to generate protein-ligand binding affinity scores. We verify the performance of this model on the PDBbind v.2019 dataset. The experimental results show that the proposed method achieves excellent performance. © 2023 IEEE.

关键词： Affinity Prediction Network Drug Representation Network Multi-Scale Protein Features Protein-Ligand Binding Affinity

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VAGeo: View-specific Attention for Cross-View Object Geo-Localization

VAGeo: View-specific Attention for Cross-View Object Geo-Loc...

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2025 IEEE International Conference on Acoustics, Speech, and Signal processing, ICASSP 2025

作者： Li, Zhongyang Yuan, Xin Liu, Wei Xu, Xin School of Computer Science and Technology Wuhan University of Science and Technology China Hubei Province Key Laboratory of Intelligent Information Processing and Real-Time Industrial System China

ISBN: (纸本)9798350368741

Cross-view object geo-localization (CVOGL) aims to locate an object of interest in a captured ground- or drone-view image within the satellite image. However, existing works treat ground-view and drone-view query images equivalently, overlooking their inherent viewpoint discrepancies and the spatial correlation between the query image and the satellite-view reference image. To this end, this paper proposes a novel View-specific Attention Geo-localization method (VAGeo) for accurate CVOGL. Specifically, VAGeo contains two key modules: view-specific positional encoding (VSPE) module and channel-spatial hybrid attention (CSHA) module. In object-level, according to the characteristics of different viewpoints of ground and drone query images, viewpoint-specific positional codings are designed to more accurately identify the click-point object of the query image in the VSPE module. In feature-level, a hybrid attention in the CSHA module is introduced by combining channel attention and spatial attention mechanisms simultaneously for learning discriminative features. Extensive experimental results demonstrate that the proposed VAGeo gains a significant performance improvement, i.e., improving acc@0.25/acc@0.5 on the CVOGL dataset from 45.43%/42.24% to 48.21%/45.22% for ground-view, and from 61.97%/57.66% to 66.19%/61.87% for drone-view. © 2025 IEEE.

关键词： Cross-view Object-level Localization Hybrid Attention Mechanism View-specific Positional Encoding

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DHCT-DT: Dual-branch Hybrid CNN-Transformer Combined with Dual-Teacher Semi-Supervised Network for Kidney Ultrasound Image Segmentation

DHCT-DT: Dual-branch Hybrid CNN-Transformer Combined with Du...

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2024 IEEE International Conference on systems, Man, and Cybernetics, SMC 2024

作者： Luo, Yang Liu, Jun Ding, Mengqian School of Computer Science and Technology Wuhan University of Science and Technology Wuhan China Hubei Province Key Laboratory of Intelligent Information Processing and Real-Time Industrial System Wuhan China

ISBN: (纸本)9781665410205

Accurate segmentation of kidney ultrasound (KUS) images is of great significance for the diagnosis of kidney diseases. However, KUS images have challenges such as low contrast, large size variations, and acoustic shadow interference. In addition, obtaining labeled data is a major challenge in the field of medical image segmentation. This paper proposes a dual-branch hybrid CNN Transformer combined with a dual teacher semi-supervised segmentation network (DHCT-DT) based on the MT model. The reliability of guidance can be improved between two teachers by constructing consistency regularization constraints. The U-Net architecture is employed between the main teacher and student model. The auxiliary teacher model adopts a dual-branch hybrid CNN Transformer architecture. The multi-scale channel fusion attention mechanism (MSCF) is introduced to capture the feature correlation information of KUS images at different scales and channels. Two different training methods can combine their advantages to fully extract local and global information from images. To demonstrate the applicability of the proposed method, experiments were conducted on two datasets: a KUS dataset and a breast ultrasound (BUS) dataset. Both datasets demonstrated the most competitive segmentation performance. For example, in a semi-supervised experiment using only 10% labeled data in the BUS dataset, the Dice coefficient, Jaccard coefficient, HD, and ASSD reached 82.28%, 76,36%, 13.36mm, and 3.71mm. © 2024 IEEE.

关键词： Image segmentation

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CC-Net: Consistency Learning Combined with Contrastive Learning for Kidney Ultrasound Segmentation

CC-Net: Consistency Learning Combined with Contrastive Learn...

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2024 IEEE International Conference on systems, Man, and Cybernetics, SMC 2024

ISBN: (纸本)9781665410205

Due to the scarcity of medical images with labels and the fact that medical image data is not easily accessible. Kidney ultrasound (KUS) images have speckle noise, low image quality, acoustic shadows, and other reasons, which pose significant challenges to the kidney ultrasound image segmentation task. To solve the above two problems, a novel consistency learning and contrastive learning-based kidney ultrasound image segmentation method (CC-Net) has been proposed. Specifically, the student-teacher model was adopted as the semi-supervised learning framework and uncertainty estimation was introduced. The Consensus Uncertainty Map (CUM) strategy was proposed to generate segmentation results for the teacher model when calculating uncertainty. To solve the problems of acoustic shadows and low image quality in kidney ultrasound images, a kidney ultrasound image data augmentation method (KUS-AUG) and a convolutional block (KUS-CONV) tailored to the characteristics of kidney ultrasound images were proposed. In addition, contrastive learning was implemented to enhance the encoder's ability to learn more semantic information, due to its inherent advantage in learning data distribution. Finally, a series of experiments were conducted on the ultrasound image dataset and the method achieved the best performance. © 2024 IEEE.

关键词： Contrastive Learning

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Automatic velocity picking based on optimal key points tracking algorithm

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Petroleum Science 2024年第2期21卷 903-917页

作者： Yong-Hao Wang Wen-Kai Lu Song-Bai Jin Yang Li Yu-Xuan Li Xiao-Feng Gu The Institute for Artificial Intelligence(THUAI) Tsinghua UniversityBeijing100084China State Key Laboratory of Intelligent Technology and Systems Tsinghua UniversityBeijing100084China Beijing National Research Center for Information Science and Technology(BNRist) Beijing100084China The Department of Automation Tsinghua UniversityBeijing100084China

Picking velocities from semblances manually is laborious and necessitates experience. Although various methods for automatic velocity picking have been developed, there remains a challenge in efficiently incorporating information from nearby gathers to ensure picked velocity aligns with seismic horizons while also improving picking accuracy. The conventional method of velocity picking from a semblance volume is computationally demanding, highlighting a need for a more efficient strategy. In this study, we introduce a novel method for automatic velocity picking based on multi-object tracking. This dynamic tracking process across different semblance panels can integrate information from nearby gathers effectively while maintaining computational efficiency. First, we employ accelerated density clustering on the velocity spectrum to discern cluster centers without the requirement for prior knowledge regarding the number of clusters. These cluster centers embody the maximum likelihood velocities of the main subsurface structures. Second, our proposed method tracks key points within the semblance volume. Kalman filter is adopted to adjust the tracking process, followed by interpolation on these tracked points to construct the final velocity model. Our synthetic data example demonstrates that our proposed algorithm can effectively rectify the picking errors of the clustering algorithm. We further compare the performances of the clustering method(CM), the proposed tracking method(TM), and the variational method(VM) on a field dataset from the Gulf of Mexico. The results attest that our method offers superior accuracy than CM, achieves comparable accuracy with VM, and benefits from a reduced computational cost.

关键词： Velocity picking Multi-object tracking Density clustering Kalman filter

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A Lightweight and Key Escrow-Free Access Control Scheme on Encrypted Data in Edge Computing 12

A Lightweight and Key Escrow-Free Access Control Scheme on E...

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12th International Conference on Advanced Cloud and Big Data, CBD 2024

作者： He, Heng Chen, Yuejia Lu, Jianfeng Zheng, Jiacheng School of Computer Science and Technology Wuhan University of Science and Technology Wuhan China Hubei Province Key Laboratory of Intelligent Information Processing and Real-time Industrial System Wuhan China

ISBN: (纸本)9798331511074

Attribute-based encryption provides fine-grained access control, ensuring data security in edge computing. However, existing access control schemes face issues such as high computational complexity due to bilinear pairing and key escrow with a single authority, which limit their effectiveness for lightweight terminal devices. To address these challenges, we propose a lightweight and key escrow-free access control scheme on encrypted data. This scheme replaces bilinear pairing with fast elliptic curve scalar multiplication, transferring most computational tasks to edge servers while preserving privacy, thus alleviating the computational burden on terminal devices. Additionally, we design a blockchain-based distributed key management method that allows multiple edge servers to distribute private keys collaboratively, resolving the key-escrow issue. Security analysis and performance evaluation demonstrate that our scheme effectively ensures data confidentiality, resists collusion attacks, and achieves high computational efficiency on the user side with low storage overheads, making it highly suitable for lightweight devices in edge computing. © 2024 IEEE.

关键词： Ciphertext

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ORB image feature extraction algorithm based on fuzzy control 3

ORB image feature extraction algorithm based on fuzzy contro...

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3rd International Conference on Machine Vision, Automatic Identification, and Detection, MVAID 2024

作者： Li, Ruilong College of Computer Science and Technology Wuhan University of Science and Technology Wuhan China Hubei Province Key Laboratory of Intelligent Information Processing and Real-time Industrial System Wuhan China

ISBN: (纸本)9781510681880

With the increasing demands for real-time accuracy in visual SLAM (Simultaneous Localization and Mapping), the critical front-end component of SLAM systems has become the extraction and matching of image features to estimate camera motion pose. Existing feature extraction methods are susceptible to local feature point density and even overlap due to uncertainties in lighting intensity and surrounding environments, leading to uneven distribution of overall feature points. This, in turn, affects the accuracy of feature matching, thereby impacting the performance of the SLAM process. To address these challenges, this paper proposes a novel ORB image feature extraction algorithm based on fuzzy control. Initially, a Gaussian pyramid of the image is constructed, and the Intensity Centroid is calculated to ensure scale and rotation invariance. Subsequently, candidate feature points are extracted using ORB at each pyramid level, then the candidate feature points are selectively filtered through fuzzy control based on the number of candidate feature points and the magnitude of their response values. Finally, a BRIEF descriptor is established for feature matching. The proposed Fuzzy-Controlled ORB Feature Extraction (OFFC) algorithm was experimentally validated on open-source TUM and Mikolajczyk datasets. Results indicate that OFFC successfully avoids excessive density and overlap of extracted feature points, reduces mismatches in image feature points, and enhances the accuracy of feature matching. Notably, OFFC demonstrates adaptability and maintains robust performance in three challenging scenarios: image blurring, varying brightness, and dense similarity of image blocks, highlighting its significant practical value for visual SLAM. © 2024 SPIE.

关键词： Fuzzy control

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Cross-video Identity Correlating for Person Re-identification Pre-training 38

Cross-video Identity Correlating for Person Re-identificatio...

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38th Conference on Neural information processing systems, NeurIPS 2024

作者： Zuo, Jialong Nie, Ying Zhou, Hanyu Zhang, Huaxin Wang, Haoyu Guo, Tianyu Sang, Nong Gao, Changxin National Key Laboratory of Multispectral Information Intelligent Processing Technology School of Artificial Intelligence and Automation Huazhong University of Science and Technology China Huawei Noah's Ark Lab Canada

Recent researches have proven that pre-training on large-scale person images extracted from internet videos is an effective way in learning better representations for person re-identification. However, these researches are mostly confined to pre-training at the instance-level or single-video tracklet-level. They ignore the identity-invariance in images of the same person across different videos, which is a key focus in person re-identification. To address this issue, we propose a Cross-video Identity-cOrrelating pre-traiNing (CION) framework. Defining a noise concept that comprehensively considers both intra-identity consistency and inter-identity discrimination, CION seeks the identity correlation from cross-video images by modeling it as a progressive multi-level denoising problem. Furthermore, an identity-guided self-distillation loss is proposed to implement better large-scale pre-training by mining the identity-invariance within person images. We conduct extensive experiments to verify the superiority of our CION in terms of efficiency and performance. CION achieves significantly leading performance with even fewer training samples. For example, compared with the previous state-of-the-art [9], CION with the same ResNet50-IBN achieves higher mAP of 93.3% and 74.3% on Market1501 and MSMT17, while only utilizing 8% training samples. Finally, with CION demonstrating superior model-agnostic ability, we contribute a model zoo named ReIDZoo to meet diverse research and application needs in this field. It contains a series of CION pre-trained models with spanning structures and parameters, totaling 32 models with 10 different structures, including GhostNet, ConvNext, RepViT, FastViT and so on. © 2024 Neural information processing systems foundation. All rights reserved.

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The Dual Path Multi-Feature Fusion Model combining CNN and Transformer for Age Estimation of Caenorhabditis elegans

The Dual Path Multi-Feature Fusion Model combining CNN and T...

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2024 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2024

作者： Ding, Mengqian Liu, Jun Luo, Yang Wuhan University of Science and Technology School of Computer Science and Technology Wuhan China Hubei Province Key Laboratory of Intelligent Information Processing and Real-Time Industrial System Wuhan China

ISBN: (纸本)9798350386226

The relatively simple genome, short life cycle, and easy observation of Caenorhabditis elegans (C. elegans) make it an excellent model organism for aging research. Age-stage prediction of C. elegans can help to assess the effectiveness of anti-aging interventions, better explore the role of individual differences in the aging process, and thus promote the development of medicine. However, there are still some problems in accurately predicting the age stages of C. elegans. On the one hand, there may be individual differences among C. elegans due to natural variation and environmental factors. On the other hand, nematode data sets are scarce and image information is complex. In this paper, we perform the age prediction task by studying the body contour morphology, biomarkers, and internal organ changes of C. elegans. Specifically, to address the effects of individual differences and datasets, this paper combines the body contour features, protein aggregation features, and pharyngeal terminal bulb features of C. elegans. In addition, considering the complex information of C. elegans images, this paper proposes a hybrid CNN and Transformer feature extraction method (DFCT), which can fully extract the global and local features of the image. A Dual Path Adaptive Feature Fusion Module (DAFM) is used to fuse the features. A series of experiments are conducted to verify the effectiveness of the proposed method. The experimental results show that the method proposed in this paper outperforms other methods in terms of accuracy and precision, especially in dividing 25 age stages into 3 categories, with an accuracy of 85.93%. © 2024 IEEE.

关键词： age estimation biological image analysis Caenorhabditis elegans CNN and Transformer image classification

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Ranking the Spreading Influence of Nodes in Complex Networks by Combining Local Average Weight and Average Normalized Link Entropy 4

Ranking the Spreading Influence of Nodes in Complex Networks...

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4th International Conference on Big Data, Artificial Intelligence and Internet of Things Engineering, ICBAIE 2023

作者： Fan, Kaiyu Yang, Fan Tu, Dexin Tang, Xinlai Mao, Xiuyong Guangxi University of Science and Technology School of Computer Science and Technology Liuzhou545006 China Guangxi University of Science and Technology Key Laboratory of Intelligent Information Processing and Graph Processing Liuzhou545006 China

ISBN: (纸本)9798350343618

Ranking the spreading influence of nodes is of great importance for controlling the spreading process on networks. Although a few measures are proposed for ranking nodes in weighted networks, it is still a challenge in accurately and efficiently ranking the spreading influence of nodes in weighted networks. In this paper, by utilizing both of the local and global topological structure information, a novel method is proposed. First, we define a local average weight (LAW) to describe the local topological structure information of nodes. Second, partly based on the link diversity, we define an average normalized link entropy (ANLE) to describe the global topological structure information of nodes. Further, by combining the LAW and ANLE, we propose a novel ranking measure termed as LAW-ANLE (LA) centrality. The proposed LA is verified by extensive experiments on a series of networks, and the results show that the LA is feasible and effective in accurately ranking the spreading influence of nodes. © 2023 IEEE.

关键词： Complex networks

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