Recent kernel-based PPI extraction systems achieve promising performance because of their capability to capture structural syntactic information, but at the expense of computational complexity. This paper incorporates...
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Recent kernel-based PPI extraction systems achieve promising performance because of their capability to capture structural syntactic information, but at the expense of computational complexity. This paper incorporates dependency information as well as other lexical and syntactic knowledge in a feature-based framework. Our motivation is that, considering the large amount of biomedical literature being archived daily, feature-based methods with comparable performance are more suitable for practical applications. Additionally, we explore the difference of lexical characteristics between biomedical and newswire domains. Experimental evaluation on the AIMed corpus shows that our system achieves comparable performance of 54.7 in F1-Score with other state-of-the-art PPI extraction systems, yet the best performance among all the feature-based ones.
This paper proposes a dependency-driven scheme to dynamically determine the syntactic parse tree structure for tree kernel- based anaphoricity determination in coreference resolution. Given a full syntactic parse tree...
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This paper proposes a dependency-driven scheme to dynamically determine the syntactic parse tree structure for tree kernel- based anaphoricity determination in coreference resolution. Given a full syntactic parse tree, it keeps the nodes and the paths related with current mention based on constituent dependencies from both syntactic and semantic perspectives, while removing the noisy information, eventually leading to a dependency-driven dynamic syntactic parse tree (D-DSPT). Evaluation on the ACE 2003 corpus shows that the D-DSPT outperforms all previous parse tree structures on anaphoricity determination, and that applying our anaphoricity determination module in coreference resolution achieves the so far best performance.
Event anaphora resolution plays an important role in discourse analysis. In comparison with general noun phrases, pronouns carry little information of themselves, resolving the event pronouns is a more difficult task....
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This paper proposes a new approach to dynamically determine the tree span for tree kernel-based semantic relation extraction. It exploits constituent dependencies to keep the nodes and their head children along the pa...
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Coreference resolution is an important subtask in natural language processing systems. The process of it is to find whether two expressions in natural language refer to the same entity in the world. Machine learning a...
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In reality, different persons often have the same person name. The Person Cross Document Co-reference Resolution is a task, which requires that all and only the textual mentions of an entity of type Person be individu...
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Self-organization feature mapping (SOFM) networks have strong ability for self-learning and self-adaptive. According to the characteristics of human thought, this paper constructed a kind of combined criterion, which ...
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Self-organization feature mapping (SOFM) networks have strong ability for self-learning and self-adaptive. According to the characteristics of human thought, this paper constructed a kind of combined criterion, which may be used to guide the learning of self-organization feature mapping network. Then this paper presents subsection algorithm, amalgamation algorithm and dynamical adaptive algorithm for SOFM networks so as to solve a kind of problems of classification rule mining. Finally, a practical example shows its flexibility and practicability.
MicroRNAs(miRNAs)are closely related to numerous complex human diseases,therefore,exploring miRNA-disease associations(MDAs)can help people gain a better understanding of complex disease *** increasing number of compu...
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MicroRNAs(miRNAs)are closely related to numerous complex human diseases,therefore,exploring miRNA-disease associations(MDAs)can help people gain a better understanding of complex disease *** increasing number of computational methods have been developed to predict ***,the sparsity of the MDAs may hinder the performance of many *** addition,many methods fail to capture the nonlinear relationships of miRNA-disease network and inadequately leverage the features of network and neighbor *** this study,we propose a deep matrix factorization model with variational autoencoder(DMFVAE)to predict potential *** first decomposes the original association matrix and the enhanced association matrix,in which the enhanced association matrix is enhanced by self-adjusting the nearest neighbor method,to obtain sparse vectors and dense vectors,***,the variational encoder is employed to obtain the nonlinear latent vectors of miRNA and disease for the sparse vectors,and meanwhile,node2vec is used to obtain the network structure embedding vectors of miRNA and disease for the dense ***,sample features are acquired by combining the latent vectors and network structure embedding vectors,and the final prediction is implemented by convolutional neural network with channel *** evaluate the performance of DMFVAE,we conduct five-fold cross validation on the HMDD v2.0 and HMDD v3.2 datasets and the results show that DMFVAE performs ***,case studies on lung neoplasms,colon neoplasms,and esophageal neoplasms confirm the ability of DMFVAE in identifying potential miRNAs for human diseases.
First,according to characteristics of mobile social environment,by using optimization models based on similarity degree and interaction degree respectively,the optimal correlated users can be selected for analyzing tw...
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ISBN:
(纸本)9781509036202
First,according to characteristics of mobile social environment,by using optimization models based on similarity degree and interaction degree respectively,the optimal correlated users can be selected for analyzing two main factors of a target user's behaviors(***-term habits and shortterm influences);furthermore,an adaptive update strategy based on fuzzy theory is proposed to describe the importance of two factors in real time and quantitative ***,an improved Apriori theory is introduced to predict user service behaviors accurately;particularly,a new update mechanism for Apriori sample database is built to effectively integrate the samples of optimal correlated ***,simulation results verify the effectiveness of proposed algorithm.
A quality of service (QoS) or constraint-based routing selection needs to find a path subject to multiple constraints through a network. The problem of finding such a path is known as the multi-constrained path (MC...
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A quality of service (QoS) or constraint-based routing selection needs to find a path subject to multiple constraints through a network. The problem of finding such a path is known as the multi-constrained path (MCP) problem, and has been proven to be NP-complete that cannot be exactly solved in a polynomial time. The NPC problem is converted into a multiobjective optimization problem with constraints to be solved with a genetic algorithm. Based on the Pareto optimum, a constrained routing computation method is proposed to generate a set of nondominated optimal routes with the genetic algorithm mechanism. The convergence and time complexity of the novel algorithm is analyzed. Experimental results show that multiobjective evolution is highly responsive and competent for the Pareto optimum-based route selection. When this method is applied to a MPLS and metropolitan-area network, it will be capable of optimizing the transmission performance.
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