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Meta-GPS++: Enhancing Graph Meta-Learning with Contrastive Learning and Self-Training

ACM Transactions on knowledge Discovery from Data 2024年第9期18卷 1-30页

作者： Liu, Yonghao Li, Mengyu Li, Ximing Huang, Lan Giunchiglia, Fausto Liang, Yanchun Feng, Xiaoyue Guan, Renchu Key Laboratory of Symbolic Computation and Knowledge Engineering of the Ministry of Education College of Computer Science and Technology Jilin University Changchun China University of Trento Trento Italy Zhuhai Lab. of the Key Lab. of Symbolic Computation and Knowledge Eng. of the Ministry of Education Zhuhai College of Science and Technology Zhuhai China

Node classification is an essential problem in graph learning. However, many models typically obtain unsatisfactory performance when applied to few-shot scenarios. Some studies have attempted to combine meta-learning with graph neural networks to solve few-shot node classification on graphs. Despite their promising performance, some limitations remain. First, they employ the node encoding mechanism of homophilic graphs to learn node embeddings, even in heterophilic graphs. Second, existing models based on meta-learning ignore the interference of randomness in the learning process. Third, they are trained using only limited lab.led nodes within the specific task, without explicitly utilizing numerous unlab.led nodes. Finally, they treat almost all sampled tasks equally without customizing them for their uniqueness. To address these issues, we propose a novel framework for few-shot node classification called Meta-GPS. Specifically, we first adopt an efficient method to learn discriminative node representations on homophilic and heterophilic graphs. Then, we leverage a prototype-based approach to initialize parameters and contrastive learning for regularizing the distribution of node embeddings. Moreover, we apply self-Training to extract valuable information from unlab.led nodes. Additionally, we adopt S (scaling and shifting) transformation to learn transferable knowledge from diverse tasks. The results on real-world datasets show the superiority of Meta-GPS. Our code is availab.e here. © 2024 Copyright held by the owner/author(s).

关键词： Contrastive Learning

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Research and analysis of psychological data based on machine learning methods

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International Journal of Wireless and Mobile Computing 2022年第1期22卷 1-8页

作者： Chen, Guangshun Lv, Wei Ma, Junwei Liang, Yanchun Zhuhai Lab. of Key Lab. of Symbol Computation and Knowledge Engineering of Ministry of Education Zhuhai College of Jilin University Jilin Zhuhai China Key Laboratory of Symbol Computation and Knowledge Engineering of Ministry of Education College of Computer Science and Technology Jilin University Jilin Changchun China

The integration of psychology and computer science has become the mainstream contemporary research method on psychological data. Weibo, China's largest open platform for communication and information sharing between users, has many emotional contents hidden in its data. According to the current trend, the Weibo data are segmented by machine learning to obtain a psychological portrait of Weibo users. This design uses Long and Short-Term Memory (LSTM) networks and Convolutional Neural Networks (CNNs) to perform sentiment classification on Weibo data. The classification results are analysed using word frequency analysis and the Latent Dirichlet Allocation (LDA) model to obtain portraits of Weibo users' sentiment and an analysis of the results. The results are displayed in the form of word clouds. According to the clustering results of the word clouds, the main factors affecting different polar emotions can be analysed. © 2022 Inderscience Enterprises Ltd.. All rights reserved.

关键词： Statistics

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The Discrete Approximation Problem for a Special Case of Hermite-Type Polynomial Interpolation

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Journal of Systems Science & Complexity 2022年第5期35卷 2004-2015页

作者： GONG Yihe JIANG Xue ZHANG Shugong College of Science Northeast Electric Power UniversityJilin 132000China School of Mathematics and Systematic Sciences Shenyang Normal UniversityShenyang 110034China Institute of Mathematics Key Lab.of Symbolic Computation and Knowledge Engineering(Ministry of Education)Jilin UniversityChangchun 130012China

Every univariate Hermite interpolation problem can be written as a pointwise limit of Lagrange ***,this property is not preserved for the multivariate *** this paper,the authors first generalize the result of *** an application,the authors consider the discrete approximation problem for a special case when the interpolation condition contains all partial derivatives of order less than n and one nth order differential *** addition,for the case of n≥3,the authors use the concept of Cartesian tensors to give a sufficient condition to find a sequence of discrete points,such that the Lagrange interpolation problems at these points converge to the given Hermite-type interpolant.

关键词： Discrete approximation problem Hermite interpolation Lagrange interpolation

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Extracting a justification for OWL ontologies by critical axioms

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Frontiers of Computer Science 2020年第4期14卷 55-64页

作者： Yuxin YE Xianji CUI Dantong OUYANG College of Computer Science and Technology Jilin UniversityChangchun130012China Key Lab of Symbolic Computation and Knowledge Engineering(Jilin University) Ministry of EducationChangchun130012China College of Information and Communication Engineering Dalian Minzu UniversityDalian116600China

Extracting justifications for web ontology language(OWL)ontologies is an important mission in ontology *** this paper,we focus on black-box techniques which are based on ontology *** creating a recursive expansion procedure,all elements which are called critical axioms in the justification are explored one by *** this detection procedure,an axiom selection function is used to avoid testing irrelevant *** addition,an incremental reasoning procedure has been proposed in order to substitute series of standard reasoning tests *** is implemented by employing a pseudo model to detect“obvious”satisfiability *** experimental results show that our proposed strategy for extracting justifications for OWL ontologies by adopting incremental expansion is superior to traditional Black-box methods in terms of efficiency and performance.

关键词： description logics automated reasoning ontology engineering justification

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Discover the Binding Domain of Transmembrane Proteins Based on Structural Universality

Discover the Binding Domain of Transmembrane Proteins Based ...

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2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021

作者： Bao, Yihang He, Fei Wang, Weixi Wang, Han Dong, Minglong Northeast Normal University Changchun School of Information Science and Technology China NE Norm. Univ. Key Lab. of Symbolic Computation and Knowledge Engineering of Ministry of Education Jilin University Changchun School of Information Science and Technology China Nanyang Technological University Singapore School of Biological Sciences Singapore

ISBN: (纸本)9781665401265

Transmembrane proteins (TMPs) serve as drug targets for more than half of the drugs currently availab.e in the market. However, it had not been clearly explained how they realize their drug effects through multiple complex molecules bindings actions. Research into TMPs bindings and corresponding structural basis will provide key information for drug research and new drug development. In this study, we defined the binding domain of TMPs according to the binding region investigation of multiple conjugate types. A 3D deep learning model was architected to discover the structural universality inside those domains. The experimental results proved such binding domains existing on the surface of TMPs, and they are structural specific distinguishing to the surface regions without any binding activities. This work provides a new theoretical basis for TMPs binding research and can greatly boost the development of the drug industry. © 2021 IEEE.

关键词： Proteins

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Web-based teamwork: Distributed software development course under Covid-19 15

Web-based teamwork: Distributed software development course ...

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15th International Conference on Computer Science and Education, ICCSE 2020

作者： Zhang, Rui Mestre, Pedro Serodio, Carlos Prada, Marilia Gao, Wenjuan Jilin University Key Lab of Symbolic Computation and Knowledge Engineering Chinese Ministry of Education College of Computer Science and Technology Changchun130012 China University of Minho Centro Algoritmi Guimaraes4800-058 Portugal Department of Social and Organizational Psychology Lisboa Portugal Library of Changchun University Changchun130022 China

ISBN: (纸本)9781728172675

In a increasingly globalized world, it is very important to help students to acquire the hard and soft skills needed to cope with the challenges they will face when working in such environments. However, even though students find this subject interesting and volunteer for it, it is hard, even impossible to teach college students such a distributed fashion of teamwork. In this paper, a case study is provided to illustrate the methodology and experiences of a joint course, distributed software development, of multiple universities from Asia, Europe, North and South Americas. The results show that student can get the spirit, effective communication for such web-based teamwork environment and achieve software project development. The recent developments because of the Covid-19 pandemic are the facts that now students have to cooperate remotely with each other not only across continents but also inside their own city or country. It has increased the awareness of the need for this kind of training and effectively improved the interactions between team elements in different countries and improved the students' feeling of belonging to their team. © 2020 IEEE.

关键词： Students

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Warburg Effects in Cancer and Normal Proliferating Cells:Two Tales of the Same Name

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Genomics, Proteomics & Bioinformatics 2019年第3期17卷 273-286页

作者： Huiyan Sun Liang Chen Sha Cao Yanchun Liang Ying Xu The China-Japan Union Hospital Jilin UniversityChangchun 130033China MOE Key Laboratory of Symbolic Computation and Knowledge Engineering College of Computer Science and TechnologyJilin UniversityChangchun 130012China Computational Systems Biology Lab Department of Biochemistry and Molecular Biology and Institute of BioinformaticsUniversity of GeorgiaAthensGA 30602USA Faculty of Health Sciences University of MacaoTaipaMacao SAR 999078China Department of Biostatistics School of MedicineIndiana UniversityIndianapolisIN 46202USA Zhuhai Laboratory of MOE Key Laboratory of Symbolic Computation and Knowledge Engineering Zhuhai College of Jilin UniversityZhuhai 519041China

It has been observed that both cancer tissue cells and normal proliferating cells(NPCs)have the Warburg *** goal here is to demonstrate that they do this for different *** accomplish this,we have analyzed the transcriptomic data of over 7000 cancer and control tissues of 14 cancer types in TCGA and data of five NPC types in *** analyses reveal that NPCs accumulate large quantities of ATPs produced by the respiration process before starting the Warburg effect,to raise the intracellular pH from 6.8 to 7.2 and to prepare for cell division *** cell cycle starts,the cells start to rely on glycolysis for ATP generation followed by ATP hydrolysis and lactic acid release,to maintain the elevated intracellular pH as needed by cell division since together the three processes are pH *** cells go back to the normal respirationbased ATP production once the cell division phase *** comparison,cancer cells have reached their intracellular pH at 7.4 from top down as multiple acid-loading transporters are up-regulated and most acid-extruding ones except for lactic acid exporters are *** cells use continuous glycolysis for ATP production as way to acidify the intracellular space since the lactic acid secretion is decoupled from glycolysis-based ATP generation and is pH balanced by increased expressions of acid-loading ***-expression analyses suggest that lactic acid secretion is regulated by external,non-pH related ***,our data strongly suggest that the two cell types have the Warburg effect for very different reasons.

关键词： Cancer Warburg effect Fenton reaction Cell proliferation pH homeostasis

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Attention-based multi-level feature fusion for named entity recognition 29

Attention-based multi-level feature fusion for named entity ...

引用

29th International Joint Conference on Artificial Intelligence, IJCAI 2020

作者： Yang, Zhiwei Chen, Hechang Zhang, Jiawei Ma, Jing Chang, Yi College of Computer Science and Technology Jilin University Changchun China School of Artificial Intelligence Jilin University Changchun China IFM Lab Department of Computer Science Florida State University TallahasseeFL United States Department of Computer Science Hong Kong Baptist University Hong Kong Hong Kong Key Laboratory of Symbolic Computation Knowledge Engineering of Ministry of Education China International Center of Future Science Jilin University Changchun China

ISBN: (纸本)9780999241165

Named entity recognition (NER) is a fundamental task in the natural language processing (NLP) area. Recently, representation learning methods (e.g., character embedding and word embedding) have achieved promising recognition results. However, existing models only consider partial features derived from words or characters while failing to integrate semantic and syntactic information (e.g., capitalization, inter-word relations, keywords, lexical phrases, etc.) from multi-level perspectives. Intuitively, multi-level features can be helpful when recognizing named entities from complex sentences. In this study, we propose a novel framework called attention-based multi-level feature fusion (AMFF), which is used to capture the multi-level features from different perspectives to improve NER. Our model consists of four components to respectively capture the local character-level, global character-level, local word-level, and global word-level features, which are then fed into a BiLSTM-CRF network for the final sequence lab.ling. Extensive experimental results on four benchmark datasets show that our proposed model outperforms a set of state-of-the-art baselines. © 2020 Inst. Sci. inf., Univ. Defence in Belgrade. All rights reserved.

关键词： Embeddings

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Modern deep learning in bioinformatics

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Journal of Molecular Cell Biology 2020年第11期12卷 823-827页

作者： Haoyang Li Shuye Tian Yu Li Qiming Fang Renbo Tan Yijie Pan Chao Huang Ying Xu Xin Gao Cancer Systems Biology Center The China-Japan Union HospitalJilin UniversityChangchun 130033China MOE Key Laboratory of Symbolic Computation and Knowledge Engineering College of Computer Science and TechnologyJilin UniversityChangchun 130012China Department of Biology Southern University of Science and TechnologyShenzhen 518055China Computational Bioscience Research Center(CBRC) Computer Electrical and Mathematical Sciences and Engineering(CEMSE)DivisionKing Abdullah University of Science and Technology(KAUST)Thuwal 23955Saudi Arabia School of Computer Science and Technology Hangzhou Dianzi UniversityHangzhou 310018China Ningbo Institute of Information Technology Application Chinese Academy of SciencesNingbo 315040China Computational Systems Biology Lab Department of Biochemistry and Molecular Biology and Institute of BioinformaticsUniversity of GeorgiaAthensGA 30602USA

Deep learning(DL)has shown explosive growth in its application to bioinformatics and has demonstrated thrillingly promising power to mine the complex relationship hidden in large-scale biological and biomedical data.A number of comprehensive reviews have been published on such applications,ranging from high-level reviews with future perspectives to those mainly serving as tutorials.

关键词： has such she

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Game Theoretic Approaches in Vehicular Networks: A Survey

arXiv

引用

arXiv 2020年

作者： Sun, Zemin Liu, Yanheng Wang, Jian Anil, Carie Cao, Dongpu College of Computer Science and Technology Key Laboratory of Symbolic Computation Knowledge Engineering of Ministry of Education Jilin University Changchun130012 China Engineering VIT-AP AmaravatiAndhra Pradesh522237 India College of Engineering Nanjing Agricultural University Nanjing210031 China Waterloo Cognitive Autonomous Driving Lab University of Waterloo N2L 3G1 Canada

—In the era of the Internet of Things (IoT), vehicles and other intelligent components in Intelligent Transportation System (ITS) are connected, forming the Vehicular Networks (VNs) that provide efficient and secure traffic, ubiquitous access to information, and various applications. However, as the number of connected nodes keeps increasing, it is challenging to satisfy various and large amounts of service requests with different Quality of Service (QoS) and security requirements in the highly dynamic VNs. Intelligent nodes in VNs can compete or cooperate for limited network resources so that either an individual or a group objectives can be achieved. Game theory, a theoretical framework designed for strategic interactions among rational decision-makers who faced with scarce resources, can be used to model and analyze individual or group behaviors of communication entities in VNs. This paper primarily surveys the recent advantages of GT used in solving various challenges in VNs. As VNs and GT have been extensively investigate34d, this survey starts with a brief introduction of the basic concept and classification of GT used in VNs. Then, a comprehensive review of applications of GT in VNs is presented, which primarily covers the aspects of QoS and security. Moreover, with the development of fifth-generation (5G) wireless communication, recent contributions of GT to diverse emerging technologies of 5G integrated into VNs are surveyed in this paper. Finally, several key research challenges and possible solutions for applying GT in VNs are outlined. Copyright © 2020, The Authors. All rights reserved.

关键词： Game theory

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