检索结果-内蒙古大学图书馆

Constructing multi-modality and multi-classifier radiomics predictive models through reliable classifier fusion

学校读者我要写书评

暂无评论

arXiv 2017年

作者： Zhou, Zhiguo Zhou, Zhi-Jie Hao, Hongxia Li, Shulong Chen, Xi Zhang, You Folkert, Michael Wang, Jing Department of Radiation Oncology UT Southwestern Medical Center DallasTX United States High-Tech Institute of Xi'an Xi'an China Department of Information and Control Engineering Xi'an University of Technology Xi'an China School of Computer Science and Technology Key Laboratory of Intelligent Perception and Image Understanding of Ministry of Education Xidian University Xi'an China School of Biomedical Engineering Southern Medical Unversity Guangzhou China Institute of Image Processing and Pattern Recognition Xi'an Jiaotong Unversity Xi'an China

Radiomics aims to extract and analyze large numbers of quantitative features from medical images and is highly promising in staging, diagnosing, and predicting outcomes of cancer treatments. Nevertheless, several challenges need to be addressed to construct an optimal radiomics predictive model. First, the predictive performance of the model may be reduced when features extracted from an individual imaging modality (e.g. PET, CT, MRI) are blindly combined into a single predictive model. Second, because many different types of classifiers are available to construct a predictive model, selecting an "optimal" classifier for a particular application is still challenging. In this work, we developed multi-modality and multi-classifier radiomics predictive models that address the aforementioned issues in currently available models. Specifically, a new reliable classifier fusion strategy was proposed to optimally combine output from different modalities and classifiers. In this strategy, modality-specific classifiers were first trained, and an analytic evidential reasoning (ER) rule was developed to fuse the output score from each modality to construct an optimal predictive model. One public datasets and two clinical case studies were performed to validate model performance. The experimental results indicated that the proposed ER rule based radiomics models outperformed the traditional models that rely on a single classifier or simply use combined features from different modalities. Copyright © 2017, The Authors. All rights reserved.

关键词： Diagnosis

Identification of new M31 star cluster candidates from PAndAS images using convolutional neural networks

学校读者我要写书评

暂无评论

arXiv 2021年

作者： Wang, Shoucheng Chen, Bingqiu Ma, Jun Long, Qian Yuan, Haibo Liu, Dezi Zhou, Zhimin Liu, Wei Chen, Jiamin He, Zizhao Key Laboratory of Optical Astronomy National Astronomical Observatories Chinese Academy of Sciences Beijing100012 China South-Western Institute for Astronomy Research Yunnan University Yunnan Kunming650091 China School of Astronomy and Space Sciences University of Chinese Academy of Sciences Beijing100049 China Yunnan Observatories Chinese Academy of Sciences Kunming650216 China Department of Astronomy Beijing Normal University Beijing100875 China National Laboratory of Pattern Recognition Institute of Automation Chinese Academy of Sciences Beijing100190 China School of Computer Science and Engineering Central South University Changsha410083 China Key Laboratory of Space Astronomy and Technology National Astronomical Observatories Chinese Academy of Sciences Beijing100012 China

Context. Identification of new star cluster candidates in M31 is fundamental for the study of the M31 stellar cluster system. The machine-learning method convolutional neural network (CNN) is an efficient algorithm for searching for new M31 star cluster candidates from tens of millions of images from wide-field photometric surveys. Aims. We search for new M31 cluster candidates from the high-quality g- and i-band images of 21,245,632 sources obtained from the Pan-Andromeda Archaeological Survey (PAndAS) through a CNN. Methods. We collected confirmed M31 clusters and noncluster objects from the literature as our training sample. Accurate double-channel CNNs were constructed and trained using the training samples. We applied the CNN classification models to the PAndAS g- and i-band images of over 21 million sources to search new M31 cluster candidates. The CNN predictions were finally checked by five experienced human inspectors to obtain high-confidence M31 star cluster candidates. Results. After the inspection, we identified a catalogue of 117 new M31 cluster candidates. Most of the new candidates are young clusters that are located in the M31 disk. Their morphology, colours, and magnitudes are similar to those of the confirmed young disk clusters. We also identified eight globular cluster candidates that are located in the M31 halo and exhibit features similar to those of confirmed halo globular clusters. The projected distances to the M31 centre for three of them are larger than 100 kpc. Copyright © 2021, The Authors. All rights reserved.

关键词： Sampling

Aberrant Functional Network Connectivity Transition Probability in Major Depressive Disorder

学校读者我要写书评

暂无评论

Aberrant Functional Network Connectivity Transition Probabil...

Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)

作者： Elaheh Zendehrouh Mohammad. S. E. Sendi Jing Sui Zening Fu Dongmei Zhi Luxian Lv Xiaohong Ma Qing Ke Xianbin Li Chuanyue Wang Christopher. C. Abbott Jessica A. Turner Robyn. L Miller Vince D. Calhoun Department of Computer Science Georgia State University Atlanta Georgia Department of Biomedical Engineering Georgia Institute of Technology and Emory University Atlanta Georgia Tri-institutional Center for Translational Research in Neuroimaging and Data Science: Georgia State University Georgia Institute of Technology Emory University Atlanta Georgia Brainnetome Center and National Laboratory of Pattern Recognition Beijing China and University of Chinese Academy of Sciences Beijing China Psychiatric Laboratory and Mental Health Center the State Key Laboratory of Biotherapy West China Hospital of Sichuan University Chengdu China Huaxi Brain Research Center West China Hospital of Sichuan University Chengdu China Beijing Key Lab of Mental Disorders Capital Medical University Beijing China Department of Psychiatry University of New Mexico Albuquerque New Mexico

ISBN: (数字)9781728119908

ISBN: (纸本)9781728119915

Major depressive disorder (MDD) is a common and serious mental disorder characterized by a persistent negative feeling and tremendous sadness. In recent decades, several studies used functional network connectivity (FNC), estimated from resting state functional magnetic resonance imaging (fMRI), to investigate the biological signature of MDD. However, the majority of them have ignored the temporal change of brain interaction by focusing on static FNC (sFNC). Dynamic functional network connectivity (dFNC) that explores temporal patterns of functional connectivity (FC) might provide additional information to its static counterpart. In the current study, by applying k-means clustering on dFNC of MDD and healthy subjects (HCs), we estimated 5 different states. Next, we use the hidden Markov model as a potential biomarker to differentiate the dFNC pattern of MDD patients from HCs. Comparing MDD and HC subjects' hidden Markov model (HMM) features, we have highlighted the role of transition probabilities between states as potential biomarkers and identified that transition probability from a lightly- connected state to highly connected one reduces as symptom severity increases in MDD subjects.

关键词： Hidden Markov models Hospitals Functional magnetic resonance imaging Correlation Probability Microsoft Windows Psychiatry

A novel hybrid convolutional neural network for accurate organ segmentation in 3d head and neck CT images

学校读者我要写书评

暂无评论

arXiv 2021年

作者： Chen, Zijie Li, Cheng He, Junjun Ye, Jin Song, Diping Wang, Shanshan Gu, Lixu Qiao, Yu Shenzhen Key Lab of Computer Vision and Pattern Recognition SIAT-SenseTime Joint Lab Shenzhen Institute of Advanced Technology Chinese Academy of Sciences Guangdong Shenzhen China Shanghai AI Lab Shanghai China Shenzhen Yino Intelligence Techonology Co. Ltd. Guangdong Shenzhen China Co. Ltd. Guangdong Shenzhen China Paul C. Lauterbur Research Center for Biomedical Imaging Shenzhen Institute of Advanced Technology Chinese Academy of Sciences Guangdong Shenzhen China School of Biomedical Engineering Shanghai Jiao Tong University Shanghai China Institute of Medical Robotics Shanghai Jiao Tong University Shanghai China Peng Cheng Laboratory Guangdong Shenzhen China Pazhou Lab Guangdong Guangzhou China

Radiation therapy (RT) is widely employed in the clinic for the treatment of head and neck (HaN) cancers. An essential step of RT planning is the accurate segmentation of various organs-at-risks (OARs) in HaN CT images. Nevertheless, segmenting OARs manually is time-consuming, tedious, and error-prone considering that typical HaN CT images contain tens to hundreds of slices. Automated segmentation algorithms are urgently required. Recently, convolutional neural networks (CNNs) have been extensively investigated on this task. Particularly, 3D CNNs are frequently adopted to process 3D HaN CT images. There are two issues with naïve 3D CNNs. First, the depth resolution of 3D CT images is usually several times lower than the in-plane resolution. Direct employment of 3D CNNs without distinguishing this difference can lead to the extraction of distorted image features and influence the final segmentation performance. Second, a severe class imbalance problem exists, and large organs can be orders of times larger than small organs. It is difficult to simultaneously achieve accurate segmentation for all the organs. To address these issues, we propose a novel hybrid CNN that fuses 2D and 3D convolutions to combat the different spatial resolutions and extract effective edge and semantic features from 3D HaN CT images. To accommodate large and small organs, our final model, named Organ-Net2.5D, consists of only two instead of the classic four downsampling operations, and hybrid dilated convolutions are introduced to maintain the respective field. Experiments on the MICCAI 2015 challenge dataset demonstrate that OrganNet2.5D achieves promising performance compared to state-of-the-art methods. Copyright © 2021, The Authors. All rights reserved.

关键词： Convolution

Synchronization of Multi-Weighted Complex Networks with Mixed Variable Delays and Uncertainties Via Impulsive Pinning Control

学校读者我要写书评

暂无评论

SSRN

SSRN 2023年

作者： Fan, Hongguang Shi, Kaibo Wen, Hui Zhao, Yi College of Computer Chengdu University Chengdu610106 China Key Laboratory of Pattern Recognition and Intelligent Information Processing Institutions of Higher Education of Sichuan Province Chengdu University Chengdu610106 China School of Electronic Information and Electrical Engineering Chengdu University Chengdu610106 China New Engineering Industry College Putian University Fujian Putian351100 China Engineering Research Center of Big Data Application in Private Health Medicine Fujian Province University Fujian Putian351100 China College of Mathematical and Statistical Shenzhen University Shenzhen518060 China

In this paper, we examine the synchronization problem in nonlinearly-coupled multi-weighted complex networks that contain uncertainties and varying delays. The complexities of these networks arise from the presence of both internal time-varying delays and multiple coupling time-varying delays. To address this challenge, we employ impulsive pinning control schemes and incorporate the impulsive pinning control ratio in the construction of the Lyapunov function, which allows us to determine the optimal number of pinned nodes at each pulse instant. Our analysis, based on stability theory, provides synchronization criteria that are strongly dependent on the multi-weights and time delays present in the network. Finally, we present numerical simulations of a delayed complex network to demonstrate the validity and efficacy of our derived theoretical results. © 2023, The Authors. All rights reserved.

关键词： Complex networks

Learning tubule-sensitive CNNs for pulmonary airway and artery-vein segmentation in CT

学校读者我要写书评

暂无评论

arXiv 2020年

作者： Qin, Yulei Zheng, Hao Gu, Yun Huang, Xiaolin Yang, Jie Wang, Lihui Yao, Feng Zhu, Yue-Min Yang, Guang-Zhong Institute of Image Processing and Pattern Recognition Institute of Medical Robotics Shanghai Jiao Tong University Shanghai China Key Laboratory of Intelligent Medical Image Analysis and Precise Diagnosis of Guizhou Province School of Computer Science and Technology Guizhou University Guiyang China Department of Thoracic Surgery Shanghai Chest Hospital Shanghai Jiao Tong University Shanghai China Université de Lyon INSA Lyon CREATIS CNRS INSERM UMR 5220 VilleurbanneU1206 France Institute of Medical Robotics School of Biomedical Engineering Shanghai Jiao Tong University Shanghai China

Training convolutional neural networks (CNNs) for segmentation of pulmonary airway, artery, and vein is challenging due to sparse supervisory signals caused by the severe class imbalance between tubular targets and background. We present a CNNs-based method for accurate airway and artery-vein segmentation in non-contrast computed tomography. It enjoys superior sensitivity to tenuous peripheral bronchioles, arterioles, and venules. The method first uses a feature recalibration module to make the best use of features learned from the neural networks. Spatial information of features is properly integrated to retain relative priority of activated regions, which benefits the subsequent channel-wise recalibration. Then, attention distillation module is introduced to reinforce representation learning of tubular objects. Fine-grained details in high-resolution attention maps are passing down from one layer to its previous layer recursively to enrich context. Anatomy prior of lung context map and distance transform map is designed and incorporated for better artery-vein differentiation capacity. Extensive experiments demonstrated considerable performance gains brought by these components. Compared with state-of-the-art methods, our method extracted much more branches while maintaining competitive overall segmentation performance. Codes and models are available at http://***/News/56. © 2020, CC BY.

关键词： computerized tomography

Relationship between pulmonary nodule malignancy and surrounding pleurae, airways and vessels: a quantitative study using the public LIDC-IDRI dataset

学校读者我要写书评

暂无评论

arXiv 2021年

作者： Qin, Yulei Gu, Yun Zhang, Hanxiao Yang, Jie Wang, Lihui Wang, Zhexin Yao, Feng Zhu, Yue-Min Institute of Image Processing and Pattern Recognition Shanghai Jiao Tong University Shanghai200240 China Institute of Medical Robotics Shanghai Jiao Tong University Shanghai200240 China CREATIS INSA Lyon CNRS UMR 5220 INSERM U1206 Université de Lyon Villeurbanne69621 France Key Laboratory of Intelligent Medical Image Analysis and Precise Diagnosis of Guizhou Province School of Computer Science and Technology Guizhou University Guiyang550025 China Department of Thoracic Surgery Shanghai Chest Hospital Shanghai Jiao Tong University Shanghai200025 China

Objectives: To investigate whether the pleurae, airways and vessels surrounding a nodule on non-contrast computed tomography (CT) can discriminate benign and malignant pulmonary nodules. Materials and Methods: The LIDC-IDRI dataset, one of the largest publicly available CT database, was exploited for study. A total of 1556 nodules from 694 patients were involved in statistical analysis, where nodules with average scorings 3 were respectively denoted as benign and malignant. Besides, 339 nodules from 113 patients with diagnosis ground-truth were independently evaluated. computer algorithms were developed to segment pulmonary structures and quantify the distances to pleural surface, airways and vessels, as well as the counting number and normalized volume of airways and vessels near a nodule. Odds ratio (OR) and Chi-square (χ2) testing were performed to assess the correlation between features of surrounding structures and nodule malignancy. A non-parametric receiver operating characteristic (ROC) analysis was conducted in logistic regression to evaluate discrimination ability of each structure. Results: For the benign and malignant groups, the average distances from nodules to pleural surface, airways and vessels are respectively (6.56, 5.19), (37.08, 26.43) and (1.42, 1.07) mm. The correlation between nodules and the counting number of airways and vessels that contact or project towards nodules are respectively (OR=22.96, χ2=105.04) and (OR=7.06, χ2=290.11). The correlation between nodules and the volume of airways and vessels are (OR=9.19, χ2=159.02) and (OR=2.29, χ2=55.89). The areas-under-curves (AUCs) for pleurae, airways and vessels are respectively 0.5202, 0.6943 and 0.6529. Conclusion: Our results show that malignant nodules are often surrounded by more pulmonary structures compared with benign ones, suggesting that features of these structures could be viewed as lung cancer biomarkers. © 2021, CC BY.

关键词： computerized tomography

Overview of the CCKS 2019 knowledge graph evaluation track: Entity, relation, event and QA

学校读者我要写书评

暂无评论

arXiv 2020年

作者： Han, Xianpei Wang, Zhichun Zhang, Jiangtao Wen, Qinghua Li, Wenqi Tang, Buzhou Wang, Qi Feng, Zhifan Zhang, Yang Lu, Yajuan Wang, Haitao Chen, Wenliang Shao, Hao Chen, Yubo Liu, Kang Zhao, Jun Wang, Taifeng Zhang, Kezun Wang, Meng Jiang, Yinlin Qi, Guilin Zou, Lei Hu, Sen Zhang, Minhao Lin, Yinnian Chinese Information Processing Laboratory Institute of Software Chinese Academy of Sciences Beijing100190 China School of Artificial Intelligence Beijing Normal University Beijing100875 China 305 Hospital of People’s Liberation Army Beijing100017 China Department of Computer Science and Technology Tsinghua University Beijing100084 China Yidu Cloud Beijing100000 China Harbin Institute of Technology Shenzhen Guangdong518055 China Baidu Beijing100193 China School of Computer Science & Technology Soochow University Suzhou Jiangsu215006 China Gowild Suzhou Jiangsu215002 China National Laboratory of Pattern Recognition Institute of Automation Chinese Academy of Sciences Beijing100190 China School of Artificial Intelligence University of Chinese Academy of Sciences Beijing100049 China Ant Financial Hangzhou Zhejiang310000 China School of Computer Science and Engineering Southeast University Nanjing Jiangsu211189 China Key Laboratory of Computer Network Information Integration Southeast University Nanjing Jiangsu211189 China Peking University Beijing100871 China

Knowledge graph models world knowledge as concepts, entities, and the relationships between them, which has been widely used in many real-world tasks. CCKS 2019 held an evaluation track with 6 tasks and attracted more than 1,600 teams. In this paper we give an overview of the knowledge graph evaluation tract at CCKS 2019. By reviewing the task definition, successful methods, useful resources, good strategies and research challenges associated with each task in CCKS 2019, this paper can provide a helpful reference for developing knowledge graph applications and conducting future knowledge graph researches. Copyright © 2020, The Authors. All rights reserved.

关键词： Knowledge graph

REFUGE2 CHALLENGE: A TREASURE TROVE FOR MULTI-DIMENSION ANALYSIS AND EVALUATION IN GLAUCOMA SCREENING

学校读者我要写书评

暂无评论

arXiv 2022年

作者： Fang, Huihui Li, Fei Wu, Junde Fu, Huazhu Sun, Xu Son, Jaemin Yu, Shuang Zhang, Menglu Yuan, Chenglang Bian, Cheng Lei, Baiying Zhao, Benjian Xu, Xinxing Li, Shaohua Fumero, Francisco Sigut, José Almubarak, Haidar Bazi, Yakoub Guo, Yuanhao Zhou, Yating Baid, Ujjwal Innani, Shubham Guo, Tianjiao Yang, Jie Orlando, José Ignacio Bogunović, Hrvoje Zhang, Xiulan Xu, Yanwu The REFUGE2 Challenge Australia State Key Laboratory of Ophthalmology Zhongshan Ophthalmic Center Sun Yat-Sen University Guangdong Provincial Key Laboratory of Ophthalmology and Visual Science Guangzhou China Intelligent Healthcare Unit Baidu Inc. Beijing China The Institute of High Performance Computing Agency for Science Technology and Research Singapore Yatiris Group PLADEMA Institute CONICET UNICEN Tandil Argentina Christian Doppler Lab for Artificial Intelligence in Retina Department of Ophthalmology and Optometry Medical University of Vienna Vienna Austria VUNO Inc Seoul Korea Republic of Tencent HealthCare Tencent Shenzhen China Computer Vision Institute College of Computer Science and Software Engineering of Shenzhen University Shenzhen China School of Biomedical Engineering Health Science Center Shenzhen University China Xiaohe Healthcare ByteDance Guangdong Guangzhou510000 China School of Biomedical Engineering Shenzhen University China College of Computer Science & Software Engineering Shenzhen University China Department of Computer Science and Systems Engineering Universidad de La Laguna Spain Saudi Electronic University Saudi Arabia King Saud University Saudi Arabia Institute of Automation Chinese Academy of Sciences Beijing China University of Chinese Academy of Sciences Beijing China SGGS Institute of Engineering and Technology India Institute of Medical Robotics Shanghai Jiao Tong University China Institute of Image Processing and Pattern Recognition Shanghai Jiao Tong University China

With the rapid development of artificial intelligence (AI) in medical image processing, deep learning in color fundus photography (CFP) analysis is also evolving. Although there are some open-source, labeled datasets of CFPs in the ophthalmology community, large-scale datasets for screening only have labels of disease categories, and datasets with annotations of fundus structures are usually small in size. In addition, labeling standards are not uniform across datasets, and there is no clear information on the acquisition device. Here we release a multi-annotation, multi-quality, and multi-device color fundus image dataset for glaucoma analysis on an original challenge-Retinal Fundus Glaucoma Challenge 2nd Edition (REFUGE2). The REFUGE2 dataset contains 2000 color fundus images with annotations of glaucoma classification, optic disc/cup segmentation, as well as fovea localization. Meanwhile, the REFUGE2 challenge sets three sub-tasks of automatic glaucoma diagnosis and fundus structure analysis and provides an online evaluation framework. Based on the characteristics of multi-device and multi-quality data, some methods with strong generalizations are provided in the challenge to make the predictions more robust. This shows that REFUGE2 brings attention to the characteristics of real-world multi-domain data, bridging the gap between scientific research and clinical application. © 2022, CC BY-NC-ND.

关键词： Color