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Proceedings of the 30th International Conference on Parallel architectures and Compilation Techniques

作者： Guodong Liu Sa Wang Yungang Bao State Key Laboratory of Computer Architecture Institute of Computing Technology Beijing China and University of Chinese Academy of Sciences Beijing China State Key Laboratory of Computer Architecture Institute of Computing Technology Beijing China University of Chinese Academy of Sciences Beijing China and Institute of Computing Technology (Nanjing) Chinese Academy of Sciences Nanjing China State Key Laboratory of Computer Architecture Institute of Computing Technology Beijing China University of Chinese Academy of Sciences Beijing China and Peng Cheng Laboratory Shenzhen China

ISBN: (纸本)9781665442787

With the deepening of research and increasing size of data sets, deep neural networks have become larger and larger. To reduce the training time of large neural networks, researchers propose to optimize neural networks from different levels. When performing optimizations, prior knowledge about execution time of each part of the network can help avoid repeatedly time-consuming testing and profiling process. However it is quite challenging to build an accurate iteration time prediction model, due to opaque underlying implementation of network operators and complex architecture of accelerators. In this paper, we propose SEER, an iteration time prediction model for CNNs, targeting on GPU platforms. We propose to categorize convolution kernels into three different types: Compute-bound, DRAM-bound and Under-utilized, then we build performance model for each type respectively. We combined analytical models and learning-based models to make the performance model accurate and in line with GPU execution model. Experimental results show that, our model achieves 14.71% prediction error on convolution kernels and up to 1.79% prediction error for the overall computation time in one iteration of common CNNs. Besides, when used for selecting the best convolution algorithm, our model shows 7.14% lower error rate than cuDNN's official algorithm picker.

关键词： GPU

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Bioinspired activation of silent synapses in layered materials for extensible neuromorphic computing

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Journal of Materiomics 2023年第4期9卷 787-797页

作者： Yan Kang Yabo Chen Yinlong Tan Hao Hao Cheng Li Xiangnan Xie Weihong Hua Tian Jiang College of Advanced Interdisciplinary Studies National University of Defense TechnologyChangsha410073China Institute for Quantum Information&State Key Laboratory of High Performance Computing College of ComputerNational University of Defense TechnologyChangsha410073China Institute for Quantum Science and Technology College of ScienceNational University of Defense TechnologyChangsha410073China

Activation of silent synapses is of great significance for the extension of neural plasticity related to learning and *** by the activation of silent synapses via receptor insertion in neural synapses,we propose an efficient method for activating artificial synapses through the intercalation of Sn in layered a-MoO_(3).Sn intercalation is capable of switching on the response of layered a-MoO_(3)to the stimuli of visible and near infrared light by decreasing the *** mimics the receptor insertion process in silent neural *** Sn-intercalated MoO_(3)(Sn-MoO_(3))exhibits persistent photoconductivity due to the donor impurity induced by Sn *** enables the two-terminal Sn-MoO_(3)device promising optoelectronic synapse with an ultrahigh paired pulse facilitation(PPF)up to 199.5%.On-demand activation and tunable synaptic plasticity endow the device great potentials for extensible neuromorphic *** performance of the extensible artificial neural network(ANN)based on the Sn-MoO_(3)synapses are demonstrated in pattern ***,the recognition accuracy increases from 89.7%to 94.8%by activating more nodes into the *** is consistent with the recognition process of physical neural network during brain *** intercalation engineering of MoO_(3)may provide inspirations for the design of high-performance neuromorphic computing architectures.

关键词： Activation of silent synapse Intercalation Layered materials Neuromorphic computing

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Generating Personalized Imputations for Patient Health Status Prediction in Electronic Health Records

Generating Personalized Imputations for Patient Health Statu...

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2024 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2024

作者： Liu, Yang Zhang, Weiyu Si, Jiasheng Li, Zhao Peng, Xueping Lu, Wenpeng Key Laboratory of Computing Power Network and Information Security Ministry of Education Shandong Computer Science Center Jinan China Evay Info Jinan China Shandong Fundamental Research Center for Computer Science Shandong Provincial Key Laboratory of Computing Power Internet and Service Computing Jinan China University of Technology Sydney Australian Artificial Intelligence Institute Sydney Australia

ISBN: (纸本)9798350386226

Electronic health records (EHRs) play a crucial role in the development of personalized treatment plans for patients. However, EHRs are often highly incomplete, posing significant challenges for predictive modeling. While existing deep learning models employ various imputation techniques to reconstruct missing values, they often fail to represent missing data in a personalized manner and do not learn from the missingness patterns in EHRs data. This limitation reduces their effectiveness in practical personalized healthcare applications. To address this issue, we propose SPIME, a self-supervised model that generates personalized imputations in EHRs data for patient health status prediction. We introduce a personalized missing mask (PMM) based on the frequency of feature measurements. Additionally, we incorporate a masked imputation task (MIT) loss that minimizes the loss of artificially introduced missing values, thereby enhancing the model's capability to handle missing data. SPIME adopts self-supervised pretraining to learn representations from personalized missing patterns and reconstructs missing data in the latent space. To further enhance representation learning, two independent attention mechanisms are applied separately across the feature and temporal dimensions. Experimental results on two real-world EHRs datasets show that SPIME outperforms existing state-of-the-art methods in predicting in-hospital mortality and decompensation, demonstrating its effectiveness in reconstructing missing data and predicting patient health status. The code will be published at https://***/cling6666/SPIME. © 2024 IEEE.

关键词： Electronic health record

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Multi‐granularity re‐ranking for visible‐infrared person re‐identification

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CAAI Transactions on Intelligence technology 2023年第3期8卷 770-779页

作者： Yadi Wang Hongyun Zhang Duoqian Miao Witold Pedrycz Department of Computer Science and Technology Tongji UniversityShanghaiChina Key Laboratory of Embedded System and Service Computing Ministry of EducationShanghaiChina Department of Electrical and Computer Engineering University of AlbertaEdmontonAlbertaCanada System Research Institute Polish Academy of SciencesWarsawPoland

Visible‐infrared person re‐identification(VI‐ReID)is a supplementary task of single‐modality re‐identification,which makes up for the defect of conventional re‐identification under insufficient *** is more challenging than single‐modality ReID because,in addition to difficulties in pedestrian posture,camera shoot-ing angle and background change,there are also difficulties in the cross‐modality *** works only involve coarse‐grained global features in the re‐ranking calculation,which cannot effectively use fine‐grained ***,fine‐grained features are particularly important due to the lack of information in cross‐modality re‐*** this end,the Q‐center Multi‐granularity K‐reciprocal Re‐ranking Algorithm(termed QCMR)is proposed,including a Q‐nearest neighbour centre encoder(termed QNC)and a Multi‐granularity K‐reciprocal Encoder(termed MGK)for a more comprehensive feature *** converts the probe‐corresponding modality features into gallery corresponding modality features through modality transfer to narrow the modality *** takes a coarse‐grained mutual nearest neighbour as the dominant and combines a fine‐grained nearest neighbour as a supplement for similarity *** experiments on two widely used VI‐ReID benchmarks,SYSU‐MM01 and RegDB have shown that our method achieves state‐of‐the‐art ***,the mAP of SYSU‐MM01 is increased by 5.9%in all‐search mode.

关键词： computer vision recognition

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Pushing AI to wireless network edge: an overview on integrated sensing, communication, and computation towards 6G

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Science China(Information Sciences) 2023年第3期66卷 7-25页

作者： Guangxu ZHU Zhonghao LYU Xiang JIAO Peixi LIU Mingzhe CHEN Jie XU Shuguang CUI Ping ZHANG Shenzhen Research Institute of Big Data Future Network of Intelligence Institute (FNii) The Chinese University of Hong Kong (Shenzhen) School of Science and Engineering (SSE) The Chinese University of Hong Kong (Shenzhen) State Key Laboratory of Advanced Optical Communication Systems and Networks School of Electronics Peking University Department of Electrical and Computer Engineering and Institute for Data Science and Computing University of Miami Peng Cheng Laboratory State Key Laboratory of Networking and Switching Technology Beijing University of Posts and Telecommunications

Pushing artificial intelligence(AI) from central cloud to network edge has reached board consensus in both industry and academia for materializing the vision of artificial intelligence of things(AIoT) in the sixth-generation(6G) era. This gives rise to an emerging research area known as edge intelligence, which concerns the distillation of human-like intelligence from the vast amount of data scattered at the wireless network edge. Typically, realizing edge intelligence corresponds to the processes of sensing, communication,and computation, which are coupled ingredients for data generation, exchanging, and processing, ***, conventional wireless networks design the three mentioned ingredients separately in a task-agnostic manner, which leads to difficulties in accommodating the stringent demands of ultra-low latency, ultra-high reliability, and high capacity in emerging AI applications like auto-driving and metaverse. This thus prompts a new design paradigm of seamlessly integrated sensing, communication, and computation(ISCC) in a taskoriented manner, which comprehensively accounts for the use of the data in downstream AI tasks. In view of its growing interest, this study provides a timely overview of ISCC for edge intelligence by introducing its basic concept, design challenges, and enabling techniques, surveying the state-of-the-art advancements, and shedding light on the road ahead.

关键词： sixth-generation (6G) edge intelligence artificial intelligence of things (AIoT) integrated sensing communication and computation (ISCC)

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Monotonicity and nonmonotonicity in L3-valued propositional logic

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Frontiers of computer Science 2022年第4期16卷 33-43页

作者： Wei Li Yuefei Sui State Key Laboratory of Software Development Environment Beihang UniversityBeijing100083China Key Laboratory of Intelligent Information Processing Institute of Computing TechnologyChinese Academy of SciencesBeijing100190China School of Computer Science and Technology University of Chinese Academy of SciencesBeijing100049China

A sequent is a pair (Γ, Δ), which is true under an assignment if either some formula in Γ is false, or some formula in Δ is true. In L_(3)-valued propositional logic, a multisequent is a triple Δ∣Θ∣Γ, which is true under an assignment if either some formula in Δ has truth-value t, or some formula in Θ has truth-value m, or some formula in Γ has truth-value f. There is a sound, complete and monotonic Gentzen deduction system G for sequents. Dually, there is a sound, complete and nonmonotonic Gentzen deduction system G′ for co-sequents Δ: Θ: Γ. By taking different quantifiers some or every, there are 8 kinds of definitions of validity of multisequent Δ∣Θ∣Γ and 8 kinds of definitions of validity of co-multisequent Δ: Θ: Γ, and correspondingly there are 8 sound and complete Gentzen deduction systems for sequents and 8 sound and complete Gentzen deduction systems for co-sequents. Correspondingly their monotonicity is discussed.

关键词： sequent mulisequent gentzen deduction system monotonicity nonmonotonicity

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Deep Representation Learning for Electron Ionization Mass Spectra Retrieval

Deep Representation Learning for Electron Ionization Mass Sp...

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2024 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2024

作者： Liu, Shibo Zhang, Xuan Jiao, Anlei Sun, Shiwei Dian, Longyang Cui, Xuefeng Shandong University School of Computer Science and Technology Qingdao China Chinese Academy of Sciences Key Lab of Intelligent Information Processing Institute of Computing Technology Beijing China Shandong University State Key Laboratory of Microbial Technology Qingdao China

ISBN: (纸本)9798350386226

The task of retrieving and analyzing mass spectra is indispensable for the identification of compounds in mass spectrometry (MS). This methodology is of critical importance as it enables researchers to correlate observed spectra with established databases, thereby precisely determining the chemical composition of samples. The primary challenges to its efficacy lie in optimizing the balance between retrieval accuracy and processing speed. Empirical studies have demonstrated that by converting mass spectra into embeddings via deep learning, it is possible to achieve both high accuracy and speed in retrieval. Nevertheless, there are complex challenges associated with employing deep learning for spectral embedding, particularly within the domain of electron ionization mass spectrometry (EI-MS). In this paper, we introduce a novel representation learning technique termed EI-MS2VEC for EI-MS retrieval. Our spectrum retrieval methodology surpasses current state-of-the-art techniques such as FastEI. For the in-silico library, we attain hit rate@1 and hit rate@10 of 43.6% and 84.5%, respectively, compared to FastEI's 36.7% and 80.4%. Moreover, our retrieval approach operates with an order of magnitude greater speed than FastEI. The source code is available on Github (https://***/xfcui/EI-MS2VEC). © 2024 IEEE.

关键词： Embeddings

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BuildEnVR: An Immersive Analysis System for Environmental Field 30

BuildEnVR: An Immersive Analysis System for Environmental Fi...

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30th IEEE International Conference on Parallel and Distributed Systems, ICPADS 2024

作者： Zhou, Zhenghan Liu, Kebin Xie, Yantong Jin, Hangxu Liu, Shi Wang, Ruiqing Zhao, Haitian Lin, Borong Mu, Xiaofang Qi, Hui Tsinghua University Global Innovation Exchange China Fuzhou Fuyao Institute for Advanced Study China Carnegie Mellon University School of Architecture United States Tsinghua University School of Architecture China Taiyuan Normal University College of Computer Science and Technology China Shanxi Key Laboratory of Intelligent Optimization Computing and Blockchain Technology China

ISBN: (纸本)9798331515966

Amidst global warming and escalating extreme weather events, indoor environmental quality's impact on human health and public hygiene gains prominence. Environmental parameters exist essentially as fields, which are characterized by high dimensionality, density and complexity, and contain massive amounts of information in space. To facilitate visualization and analysis of indoor environmental field, we design and implement BuildEnVR, an immersive analysis system by virtual reality, enabling remote analysis of real-time and historical environmental field data. Grounded in user needs and cognitive psychology, three visualization modes emerge: the Virtual Sensor mode enables users to access perceptual data in real-time at any 3D coordinates in ambient space, the 4D Heatmap mode visualizes spatial variations and trends over time in environmental field data, and the Synaesthesia mode realizes the fusion display of multi-dimensional environmental field data, allowing users to quickly understand the overall condition of the indoor environment with a low cognitive load. Extensive user surveys validate BuildEnVR's intuitiveness and precision, and it is suitable for both experts and general users. © 2024 IEEE.

关键词： Indoor air pollution

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Adaptive Multi-Updating Strategy Based Particle Swarm Optimization

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Intelligent Automation & Soft computing 2023年第9期37卷 2783-2807页

作者： Dongping Tian Bingchun Li Jing Liu Chen Liu Ling Yuan Zhongzhi Shi School of Computer Science and Technology Kashi UniversityKashi844006China Key Laboratory of Intelligent Information Processing Institute of Computing TechnologyChinese Academy of SciencesBeijing100190China

Particle swarm optimization(PSO)is a stochastic computation tech-nique that has become an increasingly important branch of swarm intelligence ***,like other evolutionary algorithms,PSO also suffers from premature convergence and entrapment into local optima in dealing with complex multimodal *** this paper puts forward an adaptive multi-updating strategy based particle swarm optimization(abbreviated as AMS-PSO).To start with,the chaotic sequence is employed to generate high-quality initial particles to accelerate the convergence rate of the ***,according to the current iteration,different update schemes are used to regulate the particle search process at different evolution *** be specific,two different sets of velocity update strategies are utilized to enhance the exploration ability in the early evolution stage while the other two sets of velocity update schemes are applied to improve the exploitation capability in the later evolution *** by the unequal weightage of acceleration coefficients is used to guide the search for the global worst particle to enhance the swarm *** addition,an auxiliary update strategy is exclusively leveraged to the global best particle for the purpose of ensuring the convergence of the PSO ***,extensive experiments on two sets of well-known benchmark functions bear out that AMS-PSO outperforms several state-of-the-art PSOs in terms of solution accuracy and convergence rate.

关键词： Particle swarm optimization local optima acceleration coefficients swarm diversity premature convergence

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How to Train Your Neural Network for Molecular Structure Generation from Mass Spectra?

How to Train Your Neural Network for Molecular Structure Gen...

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2024 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2024

作者： Zhao, Kai Liu, Yanmin Dian, Longyang Sun, Shiwei Cui, Xuefeng Shandong University School of Computer Science and Technology Qingdao China Shandong University State Key Laboratory of Microbial Technology Qingdao China Chinese Academy of Sciences Key Lab of Intelligent Information Processing Institute of Computing Technology Beijing China

ISBN: (纸本)9798350386226

Mass spectrometry serves as a pivotal tool for the analysis of small molecules through an examination of their mass-to-charge ratios. Recent advancements in deep learning have markedly enhanced the analysis of mass spectrometric data, facilitating the prediction of novel small molecule structures without the necessity of extensive databases. Nonetheless, the paucity of annotated datasets impedes the efficacious training of molecular generation models predicated on MS2 spectra. To mitigate this limitation, we introduce ctMSNovelist, an avant-garde method that amalgamates pre-training, fine-tuning, and co-training techniques to construct a more precise model for the generation of molecular structures from tandem mass spectrometry data. This novel approach augments both the training regimen and the predictive accuracy of the MSNovelist model, thereby surmounting the obstacle of limited data. The methodology commences with the pretraining of a Variational Autoencoder (VAE) to generate molecular fingerprints derived from SMILES strings. Subsequently, it undergoes fine-tuning to emulate noisy fingerprints originating from mass spectrometry (MS) data. Concurrently, MSNovelist is co-trained utilizing these simulated fingerprints, inclusive of the highly noisy variants produced in the early stages of VAE training. The incorporation of a substantial volume of noisy data serves to enhance model accuracy and avert overfitting. We evaluated ctMSNovelist using the GNPS dataset and attained a SMILES prediction accuracy of 48.8%, representing a 4.1% enhancement over MSNovelist. It is pertinent to note that the sole distinction between ctMSNovelist and MSNovelist in this experiment was the training process. The code and models are publicly available at https://***/xfcui/ctMSNovelist. © 2024 IEEE.

关键词： Neural networks

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