DeePMD-kit is a powerful open-source software package that facilitates molecular dynamics simulations using machine learning potentials (MLP) known as Deep Potential (DP) models. This package, which was released in 20...
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—Driven by the visions of Internet of Things and 5G communications, the edge computingsystems integrate computing, storage and network resources at the edge of the network to provide computing infrastructure, enabli...
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With the proliferation of smartphones, a novel sensing paradigm called Mobile Crowd Sensing (MCS) has emerged very recently. However, the attacks and faults in MCS cause a serious false data problem. Observing the int...
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With the proliferation of smartphones, a novel sensing paradigm called Mobile Crowd Sensing (MCS) has emerged very recently. However, the attacks and faults in MCS cause a serious false data problem. Observing the intrinsic low dimensionality of general monitoring data and the sparsity of false data, false data detection can be performed based on the separation of normal data and anomalies. Although the existing separation algorithm based on Direct Robust Matrix Factorization (DRMF) is proven to be effective, requiring iteratively performing Singular Value Decomposition (SVD) for low-rank matrix approximation would result in a prohibitively high accumulated computation cost when the data matrix is large. In this work, we observe the quick false data location feature from our empirical study of DRMF, based on which we propose an intelligent Light weight Low Rank and False Matrix Separation algorithm (LightLRFMS) that can reuse the previous result of the matrix decomposition to deduce the one for the current iteration step. Our algorithm can largely speed up the whole iteration process. From a theoretical perspective, we validate that LightLRFMS only requires one round of SVD computation and thus has very low computation cost. We have done extensive experiments using a PM 2.5 air condition trace and a road traffic trace. Our results demonstrate that LightLRFMS can achieve very good false data detection performance with the same highest detection accuracy as DRMF but with up to 10 times faster speed thanks to its lower computation cost.
Advanced information and communication technolo-gies can be used to facilitate traffic incident *** an incident is detected and blocks a road link,in order to reduce the incident-induced traffic congestion,a dynamic s...
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Advanced information and communication technolo-gies can be used to facilitate traffic incident *** an incident is detected and blocks a road link,in order to reduce the incident-induced traffic congestion,a dynamic strategy to deliver incident information to selected drivers and help them make detours in urban areas is proposed by this ***-dependent shortest path algorithms are used to generate a subnetwork where vehicles should receive such information.A simulation approach based on an extended cell transmission model is used to describe traffic flow in urban networks where path information and traffic flow at downstream road links are well *** results reveal the influences of some major parameters of an incident-induced congestion dissipation process such as the ratio of route-changing vehicles to the total vehicles,operation time interval of the proposed strategy,traffic density in the traffic network,and the scope of the area where traffic incident information is *** results can be used to improve the state of the art in preventing urban road traffic congestion caused by incidents.
The real-space density-functional perturbation theory (DFPT) for the computations of the response properties with respect to the atomic displacement and homogeneous electric field perturbation has been recently develo...
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Drawing support from an effective Medical Image Segmentation (MIS) is conducive to a substantial diagnostic basis for the physicians to identify the focus lesion in the patient body and give the subsequent clinical as...
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ISBN:
(纸本)9781665429825
Drawing support from an effective Medical Image Segmentation (MIS) is conducive to a substantial diagnostic basis for the physicians to identify the focus lesion in the patient body and give the subsequent clinical assessment of the patient status. Although various works have tried the challenging quantitative analysis problem, it is still difficult to conduct precise automatic segmentation, especially the soft tissue organs. In this decade, with the increased amount of available datasets, deep learning-based networks have achieved remarkable performance in image processing. Inspired by the state-of-the-art deep learning works, in this paper, we propose an end-to-end multi-layer network named RCGA-Net. It consists of an encoder-decoder backbone that integrates a coordinate attention mechanism based on space and channel and a global context extraction module to highlight more valuable information. To evaluate the performance of RCGA-Net, we apply it to different kinds of clinical and experimental MIS tasks to testify its generalization ability. Extensive experiments represent that our schema has taken the outperform or compatible results among the comparison methods group. Specifically, the numeric result of RCGA-Net on the pulmonary dataset has achieved a 99.12% optimum F1-score.
We report ab initio band diagram and optical absorption spectra of hexagonal boron nitride (h-BN), focusing on unravelling how the completeness of the basis set for GW calculations and electron-phonon interactions (EP...
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We report ab initio band diagram and optical absorption spectra of hexagonal boron nitride (h-BN), focusing on unravelling how the completeness of the basis set for GW calculations and electron-phonon interactions (EPIs) impact on them. The completeness of the basis set, an issue which was seldom discussed in previous optical spectra calculations of h-BN, is found crucial in providing converged quasiparticle band gaps. In the comparison among three different codes, we demonstrate that by including high-energy local orbitals in the all-electron linearized augmented plane waves based GW calculations, the quasiparticle direct and fundamental indirect band gaps are widened by ∼0.2 eV, giving values of 6.81 eV and 6.25 eV, respectively at the GW0 level. EPIs, on the other hand, reduce them to 6.62 eV and 6.03 eV respectively at 0 K, and 6.60 eV and 5.98 eV respectively at 300 K. With clamped crystal structure, the first peak of the absorption spectrum is at 6.07 eV, originating from the direct exciton contributed by electron transitions around K in the Brillouin zone. After including the EPIs-renormalized quasiparticles in the Bethe-Salpeter equation, the exciton-phonon coupling shifts the first peak to 5.83 eV at 300 K, lower than the experimental value of ∼6.00 eV. This accuracy is acceptable to an ab initio description of excited states with no fitting parameter.
BigNeuron is an open community bench-testing platform with the goal of setting open standards for accurate and fast automatic neuron tracing. We gathered a diverse set of image volumes across several species that is r...
BigNeuron is an open community bench-testing platform with the goal of setting open standards for accurate and fast automatic neuron tracing. We gathered a diverse set of image volumes across several species that is representative of the data obtained in many neuroscience laboratories interested in neuron tracing. Here, we report generated gold standard manual annotations for a subset of the available imaging datasets and quantified tracing quality for 35 automatic tracing algorithms. The goal of generating such a hand-curated diverse dataset is to advance the development of tracing algorithms and enable generalizable benchmarking. Together with image quality features, we pooled the data in an interactive web application that enables users and developers to perform principal component analysis, t-distributed stochastic neighbor embedding, correlation and clustering, visualization of imaging and tracing data, and benchmarking of automatic tracing algorithms in user-defined data subsets. The image quality metrics explain most of the variance in the data, followed by neuromorphological features related to neuron size. We observed that diverse algorithms can provide complementary information to obtain accurate results and developed a method to iteratively combine methods and generate consensus reconstructions. The consensus trees obtained provide estimates of the neuron structure ground truth that typically outperform single algorithms in noisy datasets. However, specific algorithms may outperform the consensus tree strategy in specific imaging conditions. Finally, to aid users in predicting the most accurate automatic tracing results without manual annotations for comparison, we used support vector machine regression to predict reconstruction quality given an image volume and a set of automatic tracings.
Molecular dynamics is an extensively utilized computational tool for solids, liquids and molecules simulation. Currently, much research on molecular dynamics simulation focuses on simplifying forces or parallelizing t...
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ISBN:
(数字)9781728143286
ISBN:
(纸本)9781728143293
Molecular dynamics is an extensively utilized computational tool for solids, liquids and molecules simulation. Currently, much research on molecular dynamics simulation focuses on simplifying forces or parallelizing tasks to reduce the overheads of forces computation. However, the molecular dynamics simulation still remains challenging since the communication and neighbor list construction are time-consuming in the existing algorithm. In this paper, we propose a swMD optimization strategy including a new communication mode called ghost communication to reduce superfluous communication overheads and an innovative neighbor list algorithm to improve the construction efficiency of it. Moreover, we accelerate computation by utilizing many-core resources on Sunway Taihulight and present an auto-tuning Producer-Consumer pairing algorithm to make neighbor list construction happen in fast register communication. Compared to traditional methods, swMD optimization strategy obtains a maximal 82.2% and an average of 79.4% performance improvement. We also evaluate the scalability up to 266,240 cores and the results demonstrate the high efficiency of swMD optimization strategy on communication, computation and neighbor list construction respectively.
Finding top- k elephant flows is a critical task in network measurement, with applications such as congestion control, anomaly detection, and traffic engineering. Traditional top- k flow detection problem focuses on u...
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Finding top- k elephant flows is a critical task in network measurement, with applications such as congestion control, anomaly detection, and traffic engineering. Traditional top- k flow detection problem focuses on using a small amount of memory to measure the total number of packets or bytes of each flow. Instead, we study a challenging problem of inferring the top- k elephant flows in a practical system with incomplete measurement data as a result of sub-sampling for scalability or data missing. The recent study shows it is promising to more accurately interpolate the missing data with a 3-D tensor compared to that based on a 2-D matrix. Taking full advantage of the multilinear structures, we apply tensor completion to first recover the missing data and then find the top- k elephant flows. To reduce the computational overhead, we propose a novel discrete tensor completion model which uses binary codes to represent the factor matrices. Based on the model, we further propose three novel techniques to speed up the whole top- k flow inference process: a discrete optimization algorithm to train the binary factor matrices, bit operations to facilitate quick missing data inference, and simplifying the finding of top- k elephant flows with binary code partition. In our discrete tensor completion model, only one bit is needed to represent the entry in the factor matrices instead of a real value (32 bits) needed in traditional tensor completion model, thus the storage cost is reduced significantly. Extensive experiments using two real traces demonstrate that compared with the state of art tensor completion algorithms, our discrete tensor completion algorithm can achieve similar data inference accuracy using significantly smaller time and storage space.
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