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IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

作者： Yajun Liu Yulian Ding Aimin Li Rong Fei Xie Guo Fangxiang Wu Shaanxi Key Laboratory for Network Computing and Security Technology Xi'an University of Technology Xi'an China Division of Biomedical Engineering University of Saskatchewan Saskatoon Canada Shaanxi Key Laboratory of Complex System Control and Intelligent Information Processing Xi'an University of Technology Xi'an China Department of Computer Science Department of Mechanical Engineering Division of Biomedical Engineering University of Saskatchewan Saskatoon Canada

ISBN: (数字)9781665468190

ISBN: (纸本)9781665468206

PIWI-interacting RNAs (piRNAs) are a type of small non-coding RNAs which bind with the PIWI proteins to exert biological effects in various regulatory mechanisms. A growing amount of evidence reveals that exosomal piRNAs are potential biomarkers for diagnosis and treatment of complex diseases. Effective methods for the prediction of exosomal piRNAs are the foundation of piRNA functional research. In this study, we propose an end-to-end deep network for identifying exosomal piRNAs based on features learned from natural language processing (NLP) models for sequence embedding with attention mechanism. First, a benchmark dataset is constructed by processing piRNA subcellular localization annotated data and sequence data. Moreover, bagging positive unlabeled learning is applied to get the reliable negative set. Finally, we treat a piRNA sequence as a sentence and its k-mer subsequence as a token. Sequence embedding models with self-attention mechanism is designed to extract features from exosome piRNA sequences, which are used for the prediction task. Compared with three competing methods, our model achieves the best performance and reveals the key factors of exosomal piRNA sequences by the attention mechanism. Our model characterizes exosomal piRNAs and could be beneficial for researchers to investigate exosomal piRNAs’ functions.

关键词： Proteins Location awareness RNA Biological system modeling Predictive models Feature extraction Natural language processing

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Parameter estimation of time fractional heat conduction equation for monocrystalline silicon

Parameter estimation of time fractional heat conduction equa...

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Chinese Automation Congress (CAC)

作者： Shuyan Shi Ding Liu Zhongdan Zhao Local Joint Engineering Research Center of Crystal Growth Equipment and System Integration Shananxi Key Laboratory of Complex System Control and Intelligent Information Processing Xi’an University of Technology Xi’an China

ISBN: (纸本)9781665426480

In this paper, a time-fractional heat conduction model is established to describe the heat transfer process of monocrystalline silicon in the Czochralski method. The numerical solution of the fractional-order model is obtained by using implicit difference scheme. In addition, an improved grey wolf algorithm is proposed to estimate the parameters of the fractional heat conduction model using the experimental temperature data. The numerical experiment results show that the time-fractional heat conduction model has a higher explanatory ability, compared with the classical heat conduction model. The Improved Grey Wolf algorithm proposed in this paper is effective in solving the parameter estimation problem of the time-fractional heat conduction equation.

关键词： Heating systems Temperature distribution Parameter estimation Inverse problems Simulation Mathematical models Silicon

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An image Denoising Method Based on Deep Residual GAN 4

An Image Denoising Method Based on Deep Residual GAN

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2020 4th International Workshop on Advanced Algorithms and control Engineering, IWAACE 2020

作者： Wang, Ziyuan Wang, Lidan Duan, Shukai Li, Yunfei Chongqing Key Laboratory of Nonlinear Circuits and Intelligent Information Processing Chongqing400715 China Schoolof Electronic and Information Engineering Southwest University Chongqing400715 China College of Artificiall Intelligence Southwest University Chongqing400715 China Braininspired Computing and Intelligent Control of Chongqing Key Lab Chongqing400715 China National and Local Joint Engineering Laboratory of Intelligent Transmission and Control Technology Chongqing400715 China Chongqing Brain Science Collaborative Innovation Center Chongqing400715 China

As people come into contact with image data more often, high quality and clear images attract more attention. Many methods have been proposed to deal with image noise problem including deep learning (DL). However most of them is lack of capability when customers want more perceptual details of the image without information loss. In this paper, a deep residual network based on generative adversarial (GAN) network was proposed to complete the image denoising mission. Firstly, a generative-adversarial network structure based on residual blocks was designed. Secondly, a refined loss function was given to train the GAN network. The well designed loss function can help the generated image to be very close to the clear counterpart (ground truth) while enhancing more details in colours and brightness. Finally, extensive experiments show that our network is not only convincing for images denoising, but also effective for other image process tasks, such as image defogging, medical CT denoising etc., presenting impressive and competitive effects. © Published under licence by IOP Publishing Ltd.

关键词： image denoising

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Heterogeneous influence of individuals’ behavior on mask efficacy in gathering environments

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Frontiers of Engineering Management 2022年第4期9卷 550-562页

作者： Haochen SUN Xiaofan LIU Zhanwei DU Ye WU Haifeng ZHANG Xiaoke XU College of Information and Communication Engineering Dalian Minzu UniversityDalian 116600China Web Mining Laboratory Department of Media and CommunicationCity University of Hong KongHong KongChina WHO Collaborating Centre for Infectious Disease Epidemiology and Control School of Public HealthLi Ka Shing Faculty of MedicineThe University of Hong KongHong KongChina Laboratory of Data Discovery for Health Hong Kong Science and Technology ParkHong KongChina Computational Communication Research Center Beijing Normal University(Zhuhai)Zhuhai 519087China School of Journalism and Communication Beijing Normal UniversityBeijing 100875China Key Laboratory of Intelligent Computing and Signal Processing of Ministry of Education School of Mathematical ScienceAnhui UniversityHefei 230601China

Wearing masks is an easy way to operate and popular measure for preventing *** masks can slow down the spread of viruses,their efficacy in gathering environments involving heterogeneous person-to-person contacts remains ***,we aim to investigate the epidemic prevention effect of masks in different real-life gathering *** study uses four real interpersonal contact datasets to construct four empirical networks to represent four gathering *** transmission of COVID-19 is simulated using the Monte Carlo simulation *** heterogeneity of individuals can cause mask efficacy in a specific gathering environment to be different from the baseline efficacy in general ***,the heterogeneity of gathering environments causes the epidemic prevention effect of masks to *** masks can greatly reduce the probability of clustered epidemics and the infection scale in primary schools,high schools,and ***,the use of masks alone in primary schools and hospitals cannot control *** high schools with social distancing between classes and in workplaces where the interpersonal contact is relatively sparse,masks can meet the need for *** the heterogeneity of individual behavior,if individuals who are more active in terms of interpersonal contact are prioritized for mask-wearing,the epidemic prevention effect of masks can be ***,asymptomatic infection has varying effects on the prevention effect of masks in different *** effect can be weakened or eliminated by increasing the usage rate of masks in high schools and ***,the effect on primary schools and hospitals cannot be *** study contributes to the accurate evaluation of mask efficacy in various gathering environments to provide scientific guidance for epidemic prevention.

关键词： COVID-19 masks behavioral heterogeneity asymptomatic infection

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fMRI-based Brain Disease Diagnosis: A Graph Network Approach

TechRxiv

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TechRxiv 2023年

作者： Chen, Qi-Qi Gao, Yubing Tong, Wei Li, Ping Wu, Edmond Q. The Department of Automation Shanghai Jiao Tong University Shanghai200240 China The Nanjing University of Science and Technology Jiangsu210008 China The School of Biological Science and Medical Engineering Beihang University Beijing100191 China The Key Laboratory of System Control and Information Processing Ministry of Education of China Shanghai Jiao Tong University Shanghai200240 China The Shanghai Engineering Research Center of Intelligent Control and Management Shanghai Jiao Tong University Shanghai200240 China

As a non-invasive brain imaging technology, functional magnetic resonance imaging (fMRI) provides a basic tool for brain functional network modeling and brain disease diagnosis. Problems, such as large number of parameters, low training efficiency, and poor interpretability, are encountered in mainstream models because of the high complexity of fMRI and brain networks. To solve these problems, a novel structure feature combined graph neural network (SFC-GNN) with a low number of parameters is proposed. In particular, SFC-GNN is composed of 1) the graph convolution layer of the brain region perception and 2) the node pooling layer of the graph structure feature (GSF). It also receives the sparse brain graph modeled by each subject’s fMRI as input. Especially, the GSF layer can select brain regions that are important for classification, thereby localizing all active regions related to brain disease. Moreover, a group network is constructed according to the correlation among subjects, and SFC-GNN can be extended further to a node classification model to achieve better diagnosis performance. The proposed method has been validated on the ABIDE and ADNI datasets, thereby showing the effectiveness of our proposed method in various experiments. © 2023, CC BY.

关键词： Magnetic resonance imaging

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FreeDriveRF: Monocular RGB Dynamic NeRF without Poses for Autonomous Driving via Point-Level Dynamic-Static Decoupling

arXiv

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arXiv 2025年

作者： Wen, Yue Song, Liang Liu, Yijia Zhu, Siting Miao, Yanzi Han, Lijun Wang, Hesheng Department of Automation Key Laboratory of System Control and Information Processing of Ministry of Education Key Laboratory of Marine Intelligent Equipment and System of Ministry of Education Shanghai Engineering Research Center of Intelligent Control and Management Shanghai Jiao Tong University Shanghai200240 China Dimanshen Technology Co. Ltd. China Engineering Research Center of Intelligent Control for Underground Space Ministry of Education School of Information and Control Engineering Advanced Robotics Research Center China University of Mining and Technology Xuzhou221116 China

Dynamic scene reconstruction for autonomous driving enables vehicles to perceive and interpret complex scene changes more precisely. Dynamic Neural Radiance Fields (NeRFs) have recently shown promising capability in scene modeling. However, many existing methods rely heavily on accurate poses inputs and multi-sensor data, leading to increased system complexity. To address this, we propose FreeDriveRF, which reconstructs dynamic driving scenes using only sequential RGB images without requiring poses inputs. We innovatively decouple dynamic and static parts at the early sampling level using semantic supervision, mitigating image blurring and artifacts. To overcome the challenges posed by object motion and occlusion in monocular camera, we introduce a warped ray-guided dynamic object rendering consistency loss, utilizing optical flow to better constrain the dynamic modeling process. Additionally, we incorporate estimated dynamic flow to constrain the pose optimization process, improving the stability and accuracy of unbounded scene reconstruction. Extensive experiments conducted on the KITTI and Waymo datasets demonstrate the superior performance of our method in dynamic scene modeling for autonomous driving. Our implementation will be available at https://***/IRMVLab/FreeDriveRF. Copyright © 2025, The Authors. All rights reserved.

关键词： Optical flows

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Point Cloud Preprocessing on 3D LiDAR data for Unmanned Surface Vehicle in Marine Environment

Point Cloud Preprocessing on 3D LiDAR data for Unmanned Surf...

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2020 IEEE International Conference on information Technology, Big Data and Artificial Intelligence, ICIBA 2020

作者： Qi, Xianzhi Fu, Wenxing An, Pei Wu, Bingli Ma, Jie National Key Laboratory of Science and Technology on Multispectral Information Processing School of Artificial Intelligence and Automation Huazhong University of Science and Technology Wuhan430074 China Science and Technology on Complex System Control and Intelligent Agent Cooperation Laboratory Beijing100071 China

ISBN: (纸本)9781728152240

Point cloud preprocessing is still a challenging task in the marine environment, for it is difficult to filter out non-obstacle points while avoiding damage to the obstacle completeness. In this paper, we propose a novel data preprocessing method on 3D LiDAR data for the unmanned surface vehicle in the marine environment. It consists of two tasks: outlier removal and wake filtering. As the spatial resolution of LiDAR changes with distance, we exploit distance normalization on statistical outlier filter for robust outlier removal. Considering the gradient difference between wave wake and obstacle surface near the water, we define and calculate the vertical state of point cloud on the range image to obtain the pre-filtering point set, and then use the RANSAC method to filter out the wake points. Experiments on real data has demonstrated the effectiveness of the proposed algorithm both in terms of feasibility and accuracy. © 2020 IEEE.

关键词： Wakes

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A Decentralized Algorithm for Coordination Between Economic Dispatch and Demand Response in Multi-Energy Systems

A Decentralized Algorithm for Coordination Between Economic ...

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IEEE Conference on Decision and control

作者： Zishun Liu Shanying Zhu Jinming Xu Cailian Chen Shanghai Jiaotong University Key Laboratory of System Control and Information Processing Ministry of Education of China Shanghai China Shanghai Engineering Research Center of Intelligent Control and Management Shanghai China College of Control Science and Engineering Zhejiang University Hangzhou China

ISBN: (纸本)9781665436601

In this paper, we investigate the problem of coordination between economic dispatch (ED) and demand response (DR) in multi-energy systems (MESs), aiming to improve the economic utility and reduce the waste of energy in MESs. Since multiple energy sources are coupled through energy hubs (EHs), the supply-demand constraints are nonconvex. To deal with this issue, we propose a linearization method to transform the coordination problem to a convex social welfare optimization one. Then a decentralized algorithm based on parallel Alternating Direction Method of Multipliers (ADMM) and dynamic average tracking protocol is developed, where each agent could only make decisions based on information from their neighbors. Moreover, under the assumption of convexity, we show convergence of the algorithm estimates to the global optimal solution. Finally, a case study on the modified IEEE 14-bus network verifies the feasibility and effectiveness of our algorithm.

关键词： Economics Protocols Heuristic algorithms Conferences Transforms Convex functions Demand response

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Stability of partially unstable discrete-time switched positive nonlinear systems with delays

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Applied Mathematics and Computation 2025年 507卷

作者： Ni, Jinyuan Sheng, Yin Xiao, Qiang Zeng, Zhigang Huang, Tingwen School of Artificial Intelligence and Automation Huazhong University of Science and Technology Wuhan China the Key Laboratory of Image Processing and Intelligent Control Huazhong University of Science and Technology Wuhan China Faculty of Computer Science and Control Engineering Shenzhen University of Advanced Technology Shenzhen China

This paper addresses the stability issue of discrete-time switched positive nonlinear systems (SPNSs) characterized by partial unstable subsystems and constant delays. Firstly, we use a parameter to constrain the ratio of active durations of the stable and unstable modes, and derive the exponential stability conditions for SPNSs based on a key function. Then we analyze the relationship between convergence speed and the constant delay. Additionally, we obtain a stability criterion of SPNSs under a particular sequence of switching signals. Finally, we validate the results through a numerical example. © 2025 Elsevier Inc.

关键词： Stability criteria

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Cavity-Quantum Electrodynamics with Moiré Flatband Photonic Crystals

arXiv

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arXiv 2024年

作者： Wang, Yu-Tong Ye, Qi-Hang Yan, Jun-Yong Qiao, Yufei Chen, Chen Cheng, Xiao-Tian Li, Chen-Hui Zhang, Zi-Jian Huang, Cheng-Nian Meng, Yun Zou, Kai Zhan, Wen-Kang Zhao, Chao Hu, Xiaolong Tee, Clarence Augustine T.H. Sha, Wei E.I. Huang, Zhixiang Liu, Huiyun Jin, Chao-Yuan Ying, Lei Liu, Feng State Key Laboratory of Extreme Photonics and Instrumentation College of Information Science and Electronic Engineering Zhejiang University Hangzhou310027 China School of Physics Zhejiang Key Laboratory of Micro-nano Quantum Chips and Quantum Control Zhejiang University Hangzhou310027 China School of Precision Instrument and Optoelectronic Engineering Tianjin University Tianjin300072 China Key Laboratory of Optoelectronic Information Science and Technology Ministry of Education Tianjin300072 China Laboratory of Solid State Optoelectronics Information Technology Institute of Semiconductors Chinese Academy of Sciences Beijing100083 China College of Materials Science and Opto-Electronic Technology University of Chinese Academy of Science Beijing101804 China College of Physics and Electrical Information Engineering Zhejiang Normal University Hangzhou310058 China Key Laboratory of Intelligent Computing and Signal Processing Ministry of Education Anhui University Hefei230039 China Department of Electronic and Electrical Engineering University College London LondonWC1E 7JE United Kingdom International Joint Innovation Center Zhejiang University Haining314400 China

Quantum emitters are a key component in photonic quantum technologies. Enhancing their single-photon emission by engineering the photonic environment using cavities can improve the overall efficiency in quantum information processing. However, this enhancement is often limited by the need for precise nanoscale control over emitter’s position within micro/nano-cavities. Inspired by the fascinated physics of moiré pattern, we present an approach to strongly modify the spontaneous emission rate of a quantum emitter using fine-designed multilayer moiré photonic crystal with a robust isolate-flatband dispersion. Theoretical analysis reveals that due to its nearly infinite photonic density of states, the moiré cavity can simultaneously possess high Purcell factor and large tolerance over emitter’s position. We experimentally demonstrate the coupling between this moiré cavity and a quantum dot via the cavity-determined polarization of the dot’s emission. The radiative lifetime of the quantum dot can be tuned by a factor of 40 from 42 ps to 1692 ps, attributed to strong Purcell enhancement and Purcell inhibition effects. Our findings pave the way for moiré flatband cavity-enhanced quantum light sources, quantum optical switches and quantum nodes for quantum internet. Copyright © 2024, The Authors. All rights reserved.

关键词： Particle beams

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