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Tuning Geometric Conformations of Curved DNA Structures by controlling Positions of Nicks 1

17th International Conference on Bio-Inspired Computing: Theories and Applications, BIC-TA 2022

作者： Xie, Chun Hu, Yingxin Chen, Kuiting Chen, Zhekun Pan, Linqiang Key Laboratory of Image Information Processing and Intelligent Control of Education Ministry of China School of Artificial Intelligence and Automation Huazhong University of Science and Technology Wuhan430074 China College of Information Science and Technology Shijiazhuang Tiedao University Shijiazhuang050043 China

ISBN: (数字)9789819915491

ISBN: (纸本)9789819915484

DNA origami is one of the powerful techniques that utilize DNA as building blocks to synthesize nanostructures. Traditionally, through introducing different numbers of insertions and deletions of base pairs in DNA helices, the in-plane bending angle of curved DNA structures could be roughly tuned. Here, we explored a strategy that used the position patterns of nicks in staple strands to tune the geometric conformation of curved DNA origami structures, including in-plane bending, out-of-plane bending, and twisting angles. When the structure adopted different patterns of nicks positions, great difference appeared in the geometric properties. Further, by combining subunits of different nicks position patterns, the bending and twisting of the combined structure was effectively tuned. The strategy increases the design accuracy of curved DNA origami structures and expands the toolbox for designing DNA structures. © 2023, The Author(s), under exclusive license to Springer Nature Singapore Pte Ltd.

关键词： Molecular dynamics

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A Class of Distributed Variable Structure Multiple Model Algorithm Based on Posterior Information of Information Matrix

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Journal of Shanghai Jiaotong university(Science) 2022年第5期27卷 671-679页

作者： HUANG Yinghao WU Yi YAO Lixiu CAI Yunze Key Laboratory of Marine Intelligent Equipment and System of Ministry of Education Shanghai Jiao Tong UniversityShanghai200240China Department of Automation Key Laboratory of System Control and Information Processing of Ministry of EducationShanghai Jiao Tong UniversityShanghai200240China Alibaba(China)Co. Ltd.Hangzhou311121China

The tracking of maneuvering targets in radar networking scenarios is studied in this *** the interacting multiple model algorithm and the expected-mode augmentation algorithm,the fixed base model set leads to a mismatch between the model set and the target motion mode,which causes the reduction on tracking *** adaptive grid-expected-mode augmentation variable structure multiple model algorithm is *** adaptive grid algorithm based on the turning model is extended to the two-dimensional pattern space to realize the self-adaptation of the model ***,combining with the unscented information filtering,and by interacting the measurement information of neighboring radars and iterating information matrix with consistency strategy,a distributed target tracking algorithm based on the posterior information of the information matrix is *** the problem of filtering divergence while target is leaving radar surveillance area,a k-coverage algorithm based on particle swarm optimization is applied to plan the radar motion trajectory for achieving filtering convergence.

关键词： radar network system variable structure multiple model consistency filtering information matrix particle swarm optimization

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Prediction of chilling damage risk in maize growth period based on probabilistic neural network approach

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International Journal of Agricultural and Biological Engineering 2021年第2期14卷 120-125页

作者： Chunqiao Mi Changhua Zhao Qingyou Deng Xiaowu Deng School of Computer Science and Engineering Huaihua UniversityHuaihua 418000HunanChina Key Laboratory of Intelligent Control Technology for Wuling-Mountain Ecological Agriculture Huaihua 418000HunanChina Key Laboratory of Wuling-Mountain Health Big Data Intelligent Processing and Application in Hunan Province Universities Huaihua 418000HunanChina Human Resource Department Huaihua UniversityHuaihua 418000HunanChina

Low temperature chilling damage is one of the most serious disasters in maize production,which is a typical non-linear complex issue with numerous influencing factors and strong *** to predict it is not only a hot theoretical research topic,but also an urgent practical problem to be ***,most of the current researches are focusing on post-disaster static descriptive assessment rather than pre-disaster dynamic predictive analysis,resulting in the problems such as no indicative result and low *** this study,the satisfaction rate of environmental accumulated temperature for maize production was used to measure the chilling damage risk,and a model for maize chilling damage risk prediction based on probabilistic neural network was *** model was composed of input layer,pattern layer,summation layer and output *** obtained results showed that the prediction accuracy for the most serious risk level was as high as 0.91,and the rates of the Type I Error and Type II Error made by the model were 0.1 and 0.09,*** indicated that the model employed was promising with good *** results of this research are of both theoretical significance for providing a new reference method of pre-disaster prediction to study maize chilling disaster risk and practical significance for reducing maize production risk and ensuring yield safety.

关键词： maize chilling damage risk prediction probabilistic neural network

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Design and analysis of minimizing torque ripple for direct torque controlled permanent magnet synchronous motor based on fuzzy control method

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Journal of Computational and Theoretical Nanoscience 2016年第6期13卷 3706-3713页

作者： Ning, Bowen Cheng, Shanmei Qin, Yi Key Laboratory of Education Ministry for Image Processing and Intelligent Control School of Automation Huazhong University of Science and Technology Wuhan Hubei430074 China

This paper is presented to examine and improve the performance of the torque ripple suppression for direct torque controlled permanent magnet synchronous motor by using fuzzy control method. On the basis of analyzing the torque ripple of the direct torque control in details, the fuzzy controllers are designed for two parts. Since the errors of the torque and flux could not assess accurately in hysteresis structure, the hysteresis controllers of the conventional DTC method are replaced by the fuzzy controller which could select the optimal voltage vector by judging the deviation degree of the torque and flux errors according to the fuzzy logic inference. Then the action time of the selected optimal voltage vector is determined by using the fuzzy duty ratio control method, the ripples of torque and flux can be attenuated effectively. The comprehensive simulation experiment is exhibited to reveal the excellent response performance of the system and verify the feasibility of the proposed fuzzy control scheme. Copyright © 2016 American Scientific Publishers. All rights reserved.

关键词： Fuzzy control

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control reconfiguration on deadlocked gimballed thrust of launch vehicle

Lecture Notes in Control and Information Sciences

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Lecture Notes in control and Information Sciences 2014年 452卷 27-59页

作者： Liu, Lei Wang, Yongji Key Laboratory of Ministry of Education for Image Processing and Intelligent Control School of Automation Huazhong University of Science and Technology Wuhan 430074 Hubei China

ISBN: (纸本)9783642363849

An unprecedented challenge of the new generation launch vehicle control is its four parallel strap-on engines are oscillateable by the servomechanism. It increases the manoeuvrability of the vehicle and the control complexity simultaneously. The chapter investigates actuator failure compensation for new generation launch vehicle control. A control reconfiguration scheme of fault-tolerant control is developed to enhance the reliability of launch vehicle attitude control systems and prevent the control invalidation caused by the deadlock of the oscillating actuator, based on the congruity of the composite moment before and after the failure happens. This reconfiguration scheme is capable of utilizing the remaining control authority to achieve the desired performance in the presence of deadlock at certain detectable angle occurring in one or several actuators at unknown time instants. © Springer-Verlag Berlin Heidelberg 2014.

关键词： Launch vehicles

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IHS and support value integrated approach to improve pansharpening quality of QuickBird image

IHS and support value integrated approach to improve panshar...

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MIPPR 2007: Multispectral image processing

作者： Zheng, Sheng Yang, Changeai Liu, Jian Tian, Jinwen Electronics and Information Engineering Department Huazhong University of Science and Technology Wuhan 430074 China Institute of Intelligent Vision and Image Information Best College of Electrical Engineering and Information Technology China Three Gorges University Yichang 443002 China State Education Commission Key Laboratory for Image Processing and Intelligent Control Huazhong University of Science and Technology Wuhan 430074 China

ISBN: (纸本)9780819469519

image fusion is an important tool in remote sensing, since many Earth observation satellites provide both high-resolution panchromatic (Pan) and low-resolution multispectral (MS) images. To date, many image fusion techniques have been developed. However, the available algorithms can hardly produce a satisfactory fusion result for IKONOS and QuickBird images. Among the existing fusion algorithms, the IHS technique is the most widely used one, and the wavelet fusion is the most frequently discussed one in recent publications because of its advantages over other fusion techniques. But the color distortion of these two techniques is often obvious. The support value fusion technique demonstrates some advantages over the conventional methods. This study presents a new fusion approach that integrates the advantages of both the IHS and the support value techniques to reduce the color distortion of QuickBird fusion results. Different QuickBird images have been fused with this new approach. Visual and statistical analyses prove that the concept of the proposed extended fast IHS (eFIHS) and support value integration is promising, and it does significantly improve the fusion quality compared to conventional IHS (eFIHS) and wavelet fusion techniques.

关键词： image fusion

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Small universal spiking neural P systems with exhaustive use of rules

Small universal spiking neural P systems with exhaustive use...

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International Conference on Bio-Inspired Computing: Theories and Applications, BICTA

作者： Xingyi Zhang Yun Jiang Linqiang Pan Key Laboratory of Image Processing and Intelligent Control Department of Control Science and Engineering Huazhong University of Science and Technology Wuhan Hubei China

We consider the problem of looking for small universal spiking neural P systems with exhaustive use of rules, which was formulated as an open problem by Gheorghe Paun in a survey paper. Here, spiking neural P systems are used in two versions: as devices computing functions and as devices generating sets of numbers, with two ways of encoding the result of a computation. As devices of computing functions, if we associate the result with the distance between the first two spikes emitted by the output neuron, we produce a universal computing spiking neural P system with exhaustive use of rules (without delay) having 125 neurons; if we introduce the usual way of defining the result of a computation in membrane systems to encode the result, namely, the number of spikes emitted during a computation, then a universal computing system (without delay) with 126 neurons is also obtained in the sense of the exhaustive use of rules. For spiking neural P systems used as generators of sets of numbers, we construct a universal system (without delay) by using 128 neurons under the first way of defining the computation result, and a system (without delay) by using 127 neurons under the second way of defining the computation result.

关键词： Neurons Registers Tin Delay Generators Distance measurement Biomembranes

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Adaptive Variational Mode Time-frequency Analysis of Ship Radiated Noise 7

Adaptive Variational Mode Time-frequency Analysis of Ship Ra...

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7th International Conference on Information Science and control Engineering, ICISCE 2020

作者： Zhang, Haoyi Junejo, Naveed Ur Rehman Sun, Weitao Chen, Hailan Yan, Jiaquan Minjiang University Fujian Provincial Key Laboratory of Information Processing and Intelligent Control College of Computer and Control Engineering Fuzhou China Ilma University Department of Computer Science Karachi Pakistan Northwestern Polytechnical University School of Marine Science and Technology Xi'an China Jimei University School of Science Xiamen China Minjiang University Fujian Provincial Key Laboratory of Information Processing and Intelligent Control Fuzhou China

ISBN: (纸本)9781728164069

In this paper, we have proposed a novel time-frequency analysis method implementing adaptive variational mode decomposition (AVMD) and Wigner-Ville Distribution (WVD) to visualize the local features of ship radiated noise. Unlike the traditional methods are invalid under low signal to noise ratio (SNR), the proposed method is suitable for constructing time-frequency (TF) image with the capability of mining the local feature information accurately. Firstly, we employ complete ensemble empirical mode decomposition with adaptive noise (CEEMDAN) on the raw signal to determine the numbers of variational modes which is equal to intrinsic mode functions (IMFs) numbers. Secondly, we perform VMD algorithm to extract the local features absolutely by decomposing the raw signal into IMFs, where we set the IMFs gained by CEEMDAN as the input parameter of VMD. Finally, we adopt Wigner-Ville distribution (WVD) to draw TF signatures of all the IMFs, then superpose them to reconstruct the objected signal that can solve the cross-item problem. We have conducted the comparative experiments by the real oceanic data. Under the different SNRs, we have verified the effectiveness and robustness of the proposed method, also obtained better performance in terms of resolution than compared algorithm. © 2020 IEEE.

关键词： Intrinsic mode functions

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CloudLCA: finding the lowest common ancestor in metagenome analysis using cloud computing

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Protein & Cell 2012年第2期3卷 148-152页

作者： Guoguang Zhao Dechao Bu Changning Liu Jing Li Jian Yang Zhiyong Liu Yi Zhao Runsheng Chen Bioinformatics Research Group Key Laboratory of Intelligent Information ProcessingAdvanced Computing Research LaboratoryInstitute of Computing TechnologyChinese Academy of SciencesBeijing 100190China Bioinformatics Laboratory and National Laboratory of Biomacromolecules Institute of BiophysicsChinese Academy of SciencesBeijing 100101China State Key Laboratory for Molecular Virology and Genetic Engineering National Institute for Viral Disease Control and PreventionChinese Center for Disease Control and PreventionBeijing 100176China Graduate School of the Chinese Academy of Sciences Beijing 100190China

Estimating taxonomic content constitutes a key problem in metagenomic sequencing data ***,extracting such content from high-throughput data of next-generation sequencing is very time-consuming with the currently available ***,we present CloudLCA,a parallel LCA algorithm that significantly improves the efficiency of determining taxonomic composition in metagenomic data *** show that CloudLCA(1)has a running time nearly linear with the increase of dataset magnitude,(2)displays linear speedup as the number of processors grows,especially for large datasets,and(3)reaches a speed of nearly 215 million reads each minute on a cluster with ten thin *** comparison with MEGAN,a well-known metagenome analyzer,the speed of CloudLCA is up to 5 more times faster,and its peak memory usage is approximately 18.5%that of MEGAN,running on a fat *** can be run on one multiprocessor node or a *** is expected to be part of MEGAN to accelerate analyzing reads,with the same output generated as MEGAN,which can be import into MEGAN in a direct way to finish the following ***,CloudLCA is a universal solution for finding the lowest common ancestor,and it can be applied in other fields requiring an LCA algorithm.

关键词： CloudLCA metagenome analysis cloud computing

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P Systems with 2D Picture Grammars

P Systems with 2D Picture Grammars

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International Conference on Bio-Inspired Computing: Theories and Applications, BICTA

作者： Tao Song Xiangxiang Zeng Key Laboratory of Image Processing and Intelligent Control Department of Control Science and Engineering Huazhong University of Science and Technology Wuhan Hubei China

In formal language theory of two-dimensions, 2D picture grammars are powerful tools to generate picture languages. In this work, we incorporate the idea of membrane systems (also called P systems) into 2D picture grammars, thus introducing a new kind of picture language generating devices, named P systems with 2D picture grammars. Inspired by the structure and functioning of living cells, such a system has a hierarchical membrane structure, symbol array objects and evolution rules of 2D picture grammars. In each region delimited by the membrane structure, array objects can evolve in a parallel manner according to evolution rules present in the region, like the way biochemical objects evolve in living cells or organisms. The computational result of P system with 2D picture grammars is the set of pictures (rectangular arrays) present in a specific output membrane when the system halts. We obtain several comparison results, which show that with the membrane structure, the generating power of Siromoney matrix grammar, 2D context-free grammar and basic puzzle grammar can be enlarged.

关键词： Grammar Arrays Biomembranes Power line communications Production Context Silicon compounds

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