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2017 2nd International Conference on Software, Multimedia and Communication Engineering（SMCE 2017)

作者： Jun-yan ZHANG Chen-hui YANG Hai-ying WANG College of Information Science and Engineering Chengdu UniversityChengdu 610106China Key Laboratory of Pattern Recognition and Intelligent Information Processing of Sichuan Chengdu University

DNA Sequence Alignment is one of the most basic and most important operations in *** this paper,we put forward to SDk S algorithm based on k-tuple statistic,which is a kind of probability *** positive transition probability matrix,the negative transition probability matrix,and the logarithmic ration are computed based on Markov *** obtaining converting sequence,we get the results of k-tuple ***,the similarity measurement can be gained according to above *** the minimum support is given,we can identify two DNA sequences is similarity or *** experimental results show that SDk S algorithm has better effective performance in saving computing time.

关键词： Sequence alignment k-tuple statistic Markov model Similarity measurement

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An Effective Method for Modeling Two-dimensional Sky Background of LAMOST

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Proceedings of the International Astronomical Union 2017年第S325期12卷 63-66页

作者： Hasitieer Haerken Fuqing Duan Jiannan Zhang Ping Guo Image Processing and Pattern Recognition Laboratory Beijing Normal University 100875 Beijing China email: fqduan@bnu.edu.cnpguo@*** National Astronomical Observatories & Chinese Academy of Sciences 100012 Beijing China email: hastear@***jnzhang@***

Each CCD of LAMOST accommodates 250 spectra, while about 40 are used to observe sky background during real observations. How to estimate the unknown sky background information hidden in the observed 210 celestial spectra by using the known 40 sky spectra is the problem we solve. In order to model the sky background, usually a pre-observation is performed with all fibers observing sky background. We use the observed 250 skylight spectra as training data, where those observed by the 40 fibers are considered as a base vector set. The Locality-constrained Linear Coding (LLC) technique is utilized to represent the skylight spectra observed by the 210 fibers with the base vector set. We also segment each spectrum into small parts, and establish the local sky background model for each part. Experimental results validate the proposed method, and show the local model is better than the global model.

关键词： LAMOST celestial spectra sky background modeling

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Nonconvex penalties with analytical solutions for one-bit compressive sensing

arXiv

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arXiv 2017年

作者： Huang, Xiaolin Yan, Ming Institute of Image Processing and Pattern Recognition Shanghai Jiao Tong University MOE Key Laboratory of System Control and Information Processing Shanghai200240 China Department of Computational Mathematics Science and Engineering Department of Mathematics Michigan State University East LansingMI48824 United States

One-bit measurements widely exist in the real world and can be used to recover sparse signals. This task is known as one-bit compressive sensing (1bit-CS). In this paper, we propose novel algorithms based on both convex and nonconvex sparsity-inducing penalties for robust 1bit-CS. We consider the dual problem, which has only one variable and provides a sufficient condition to verify whether a solution is globally optimal or not. For positive homogeneous penalties, a globally optimal solution can be obtained in two steps: a proximal operator and a normalization step. For other penalties, we solve the dual problem, and it needs to evaluate the proximal operators for many times. Then we provide fast algorithms for finding analytical solutions for three penalties: minimax concave penalty (MCP), 0norm, and sorted 1penalty. Specifically, our algorithm is more than 200 times faster than the existing algorithm for MCP. Its efficiency is comparable to the algorithm for the 1penalty in time, while its performance is much better than 1. Among these penalties, sorted 1is most robust to noise in different settings. Copyright © 2017, The Authors. All rights reserved.

关键词： Compressed sensing

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Varifocal-Net: A Chromosome Classification Approach Using Deep Convolutional Networks

arXiv

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arXiv 2018年

作者： Qin, Yulei Wen, Juan Zheng, Hao Huang, Xiaolin Yang, Jie Song, Ning Zhu, Yue-Min Wu, Lingqian Yang, Guang-Zhong Institute of Image Processing and Pattern Recognition Shanghai Jiao Tong University Shanghai200240 China Center for Medical Genetics School of Life Sciences Central South University Changsha410078 China Shanghai Key Laboratory of Reproductive Medicine School of Medicine Shanghai Jiao Tong University Shanghai200025 China Diagens-Hangzhou Hangzhou311121 China University Lyon INSA Lyon CNRS INSERM CREATIS UMR 5220 U1206F-69621 France Hamlyn Centre for Robotic Surgery Imperial College London SW72AZ United Kingdom

Chromosome classification is critical for karyotyping in abnormality diagnosis. To expedite the diagnosis, we present a novel method named Varifocal-Net for simultaneous classification of chromosomes type and polarity using deep convolutional networks. The approach consists of one global-scale network (G-Net) and one local-scale network (L-Net). It follows three stages. The first stage is to learn both global and local features. We extract global features and detect finer local regions via the G-Net. By proposing a varifocal mechanism, we zoom into local parts and extract local features via the L-Net. Residual learning and multi-task learning strategies are utilized to promote high-level feature extraction. The detection of discriminative local parts is fulfilled by a localization subnet of the G-Net, whose training process involves both supervised and weakly-supervised learning. The second stage is to build two multi-layer perceptron classifiers that exploit features of both two scales to boost classification performance. The third stage is to introduce a dispatch strategy of assigning each chromosome to a type within each patient case, by utilizing the domain knowledge of karyotyping. Evaluation results from 1909 karyotyping cases showed that the proposed Varifocal-Net achieved the highest accuracy per patient case (%) of 99.2 for both type and polarity tasks. It outperformed state-of-the-art methods, demonstrating the effectiveness of our varifocal mechanism, multi-scale feature ensemble, and dispatch strategy. The proposed method has been applied to assist practical karyotype diagnosis. Copyright © 2018, The Authors. All rights reserved.

关键词： Computer aided diagnosis

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Cross-media analysis and reasoning: advances and directions

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Frontiers of Information Technology & Electronic Engineering 2017年第1期18卷 44-57页

作者： Yu-xin PENG Wen-wu ZHU Yao ZHAO Chang-sheng XU Qing-ming HUANG Han-qing LU Qing-hua ZHENG Tie-jun HUANG Wen GAO Institute of Computer Science and Technology Peking University Department of Computer Science and Technology Tsinghua University Institute of Information Science Beijing Jiaotong University National Laboratory of Pattern Recognition Institute of AutomationChinese Academy of Sciences Key Laboratory of Intelligent Information Processing Institute of Computing TechnologyChinese Academy of Sciences Department of Computer Science and Technology Xi'an Jiaotong University School of Electronics Engineering and Computer Science Peking University

Cross-media analysis and reasoning is an active research area in computer science, and a promising direction for artificial intelligence. However, to the best of our knowledge, no existing work has summarized the state-of-the-art methods for cross-media analysis and reasoning or presented advances, challenges, and future directions for the field. To address these issues, we provide an overview as follows：（1） theory and model for cross-media uniform representation; （2） cross-media correlation understanding and deep mining; （3） cross-media knowledge graph construction and learning methodologies; （4） cross-media knowledge evolution and reasoning; （5） cross-media description and generation; （6） cross-media intelligent engines; and （7） cross-media intelligent applications. By presenting approaches, advances, and future directions in cross-media analysis and reasoning, our goal is not only to draw more attention to the state-of-the-art advances in the field, but also to provide technical insights by discussing the challenges and research directions in these areas.

关键词： Cross-media analysis Cross-media reasoning Cross-media applications

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image Stitching with single-hidden layer feedforward Neural Networks

Image Stitching with single-hidden layer feedforward Neural ...

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International Joint Conference on Neural Networks

作者： Min Yan Qian Yin Ping Guo Image Processing and Pattern Recognition Laboratory Beijing Normal University

ISBN: (纸本)9781509006212

In this paper, a novel image stitching method is proposed, which utilizes scale-invariant feature transform (SIFT) feature and single-hidden layer feedforward neural network (SLFN) to get higher precision of parameter estimation. In this method, features are extracted from the image sets by the SIFT descriptor and form into the input vector of the SLFN. The output of the SLFN is those translation, rotation and scaling parameters with respect to reference and registered image sets. We also apply a fast learning scheme, called pseudoinverse learning, to train SLFN to get higher training efficiency. Comparative experiments are performed between our proposed method and the traditional random sample consensus (RANSAC) based method. The results show that our method has the advantage not only at accuracy but also remarkably at fast speed.

关键词： SIFT descriptor Feedforward neural network image registration image stitching feedforward neural nets image stitching image registration Parameter estimation fast speed

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Kernel Selection with Evolutionary Algorithm for Multiple Kernel Independent Component Analysis

Kernel Selection with Evolutionary Algorithm for Multiple Ke...

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International Joint Conference on Neural Networks

作者： Peng Wu Qian Yin Ping Guo Image Processing and Pattern Recognition Laboratory Beijing Normal University

ISBN: (纸本)9781509006212

Kernel independent component analysis (KICA) has an important application in blind source separation, in which how to select the optimal kernel, including the kernel functional form and its parameters, is the key issue for obtaining the optimal performance. In practices, a single kernel is usually chosen as the kernel model of KICA in light of experience. However, selecting a suitable kernel model is a more difficult problem if one has not sufficient experience. To deal with this problem, an evolution based method to select the kernel model of KICA is proposed in this paper. There are two main features of the proposed method: one is that using a multiple kernel model, a convex combination of several single kernels, replaces the single kernel model;another is that particle swarm optimization (PSO) algorithm is utilized to find the combination weights of the composite kernel. Experiments conducted on separating one-dimensional mixed signals, nature images, and spectroscopic CCD images showed that using multiple kernels model with PSO kernel selection algorithm can enhance the performance of KICA.

关键词： Seeds Kernel evolutionary algorithm Independent component analysis

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Study of point spread function of astronomical object imaging

引用

International Conference on Information Science and Applications, ICISA 2016

作者： Yu, Jian Yin, Qian Guo, Ping College of Computer and Information Engineering Hanshan Normal University ChaozhouGuangdong521041 China Image Processing and Pattern Recognition Laboratory Beijing Normal University Beijing100875 China

ISBN: (纸本)9789811005565

The research of point spread function (PSF) of astronomical object imaging is very important to the astronomical image restoration. In this paper, the simulated atmospheric turbulent phase screen, the short exposure PSF and longexposure PSF during the astronomical object imaging are studied. One novel Gaussian process move-and-superposition model for representing the final astronomical object long exposure PSF formation is proposed. The proposed model obtains more accurate final PSF of astronomical object imaging. © Springer Science+Business Media Singapore 2016.

关键词： Optical transfer function

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A MIL-based interactive approach for hotspot segmentation from bone scintigraphy

A MIL-based interactive approach for hotspot segmentation fr...

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International Conference on Acoustics, Speech, and Signal processing (ICASSP)

作者： Shijie Geng Jingyang Ma Xiaoguang Niu Shaoyong Jia Yu Qiao Jie Yang Institute of Image Processing and Pattern Recognition The Key Laboratory of System Control and Information Processing Ministry of Education China

ISBN: (纸本)9781479999897

Bone scintigraphy is widely used to diagnose bone diseases. Accurate hotspot segmentation is a critical task for tumor metastasis diagnosis. In this paper, we propose an interactive approach to detect and extract hotspots in thoracic region based on a new multiple instance learning (MIL) method called EM-MILBoost. We convert the segmentation problem to a multiple instance learning task by constructing positive and negative bags according to the input bounding box. In order to be robust against noisy input, we train a region-level hotspot classifier with EM-MILBoost and develop several segmentation strategies based on it. The experimental results demonstrate that our method outperforms other methods and is robust against various noisy input.

关键词： image segmentation Noise measurement Bones Training Indexes Belts Standards

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Correction to: Internet gaming disorder: deficits in functional and structural connectivity in the ventral tegmental area-Accumbens pathway

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Brain imaging and behavior 2019年第4期13卷 1182页

作者： Ruonan Wang Min Li Meng Zhao Dahua Yu Yu Hu Corinde E Wiers Gene-Jack Wang Nora D Volkow Kai Yuan School of Life Science and Technology Xidian University Xi'an Shaanxi 710071 People's Republic of China. Engineering Research Center of Molecular and Neuro Imaging Ministry of Education Xi'an People's Republic of China. Inner Mongolia Key Laboratory of Pattern Recognition and Intelligent Image Processing School of Information Engineering Inner Mongolia University of Science and Technology Baotou Inner Mongolia 014010 People's Republic of China. National Institute on Alcoholism and Alcohol Abuse National Institutes of Health Bethesda MD 20892 USA. National Institute on Drug Abuse National Institutes of Health Bethesda MD 20892 USA. School of Life Science and Technology Xidian University Xi'an Shaanxi 710071 People's Republic of China. kyuan@***. Engineering Research Center of Molecular and Neuro Imaging Ministry of Education Xi'an People's Republic of China. kyuan@***. Inner Mongolia Key Laboratory of Pattern Recognition and Intelligent Image Processing School of Information Engineering Inner Mongolia University of Science and Technology Baotou Inner Mongolia 014010 People's Republic of China. kyuan@***. National Institute on Alcoholism and Alcohol Abuse National Institutes of Health Bethesda MD 20892 USA. kyuan@***. Guangxi Key Laboratory of Multi-Source Information Mining and Security Guangxi Normal University Guilin People's Republic of China. kyuan@***.

The original version of this article contained mistakes, and the authors would like to correct them. The correct details are given below.

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