检索结果-内蒙古大学图书馆

arXiv 2019年

作者： Gong, Yu Shan, Hongming Teng, Yueyang Tu, Ning Li, Ming Liang, Guodong Wang, Ge Wang, Shanshan College of Medicine and Biological Information Engineering Northeastern University Shenyang110169 China Paul C. Lauterbur Research Center for Biomedical Imaging Shenzhen Institutes of Advanced Technology Chinese Academy of Sciences Shenzhen518055 China Key Laboratory of Intelligent Computing in Medical Images Ministry of Education Shenyang110169 China Department of Biomedical Engineering Rensselaer Polytechnic Institute TroyNY12180 United States PET-CT/MRI Center Molecular Imaging Center Wuhan University Renmin Hospital Wuhan430060 China Neusoft Medical Systems Co. Ltd Shenyang110167 China

Due to the widespread use of positron emission tomography (PET) in clinical practice, the potential risk of PET-associated radiation dose to patients needs to be minimized. However, with the reduction in the radiation dose, the resultant images may suffer from noise and artifacts that compromise diagnostic performance. In this paper, we propose a parameter-transferred Wasserstein generative adversarial network (PT-WGAN) for lowdose PET image denoising. The contributions of this paper are twofold: i) a PT-WGAN framework is designed to denoise lowdose PET images without compromising structural details, and ii) a task-specific initialization based on transfer learning is developed to train PT-WGAN using trainable parameters transferred from a pretrained model, which significantly improves the training efficiency of PT-WGAN. The experimental results on clinical data show that the proposed network can suppress image noise more effectively while preserving better image fidelity than recently published state-of-the-art methods. We make our code available at https://***/90n9-yu/PT-WGAN. Copyright © 2019, The Authors. All rights reserved.

关键词： Positron emission tomography

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Modeling and hopf bifurcation analysis of benign worms with quarantine strategy 9th

Modeling and hopf bifurcation analysis of benign worms with ...

引用

9th International Symposium on Cyberspace Safety and Security, CSS 2017

作者： Yao, Yu Fu, Qiang Sheng, Chuan Yang, Wei Key Laboratory of Medical Image Computing of Ministry of Education Northeastern University Shenyang110004 China College of Compute Science and Engineering Northeastern University Shenyang110819 China Software College Northeastern University Shenyang110819 China

ISBN: (纸本)9783319694702

Since the Morris worm occurred in 1988, malwares have threatened the network persistently. With rapid development of the Internet, network security issues become increasingly serious. Recently, the benign worms become a new active countermeasure to deal with the worm threat. In this paper, we propose a compositive-hybrid benign worm propagation model with quarantine strategy. Usually, quarantine strategy will lead to a time delay, and the worm propagation system will be unstable and out of control with the time delay increases. Then the existence condition and the stability of the positive equilibrium are derived. Through our derivation and analysis, the threshold s0 of Hopf bifurcation is obtained. The system will be stable when time delay s\s0. In addition, numerical experiments are performed and the effect of benign worms is displayed by comparing with the model that do not include benign worms. Furthermore, simulation experiments are carried out to verify our conclusions.. © 2017, Springer International Publishing AG.

关键词： Time delay

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Walk-steered convolution for graph classification

arXiv

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arXiv 2018年

作者： Jiang, Jiatao Xu, Chunyan Cui, Zhen Zhang, Tong Zheng, Wenming Yang, Jian Key Laboratory of Intelligent Perception and Systems for High-Dimensional Information of the Ministry of Education School of Computer Science and Engineering University of Science and Technology Jiangsu Key Lab of Image and Video Understanding for Social Security School of Computer Science and Engineering University of Science and Technology Nanjing210094 China Key Laboratory of Child Development and Learning Science of the Ministry of Education School of Biological Science and Medical Engineering Southeast University Nanjing210096 China

Graph classification is a fundamental but challenging issue for numerous real-world applications. Despite recent great progress in image/video classification, convolutional neural networks (CNNs) cannot yet cater to graphs well because of graphical non-Euclidean topology. In this work, we propose a walk-steered convolutional (WSC) network to assemble the essential success of standard convolutional neural networks as well as the powerful representation ability of random walk. Instead of deterministic neighbor searching used in previous graphical CNNs, we construct multi-scale walk fields (a.k.a. local receptive fields) with random walk paths to depict subgraph structures and advocate graph scalability. To express the internal variations of a walk field, Gaussian mixture models are introduced to encode principal components of walk paths therein. As an analogy to a standard convolution kernel on image, Gaussian models implicitly coordinate those unordered vertices/nodes and edges in a local receptive field after projecting to the gradient space of Gaussian parameters. We further stack graph coarsening upon Gaussian encoding by using dynamic clustering, such that high-level semantics of graph can be well learned like the conventional pooling on image. The experimental results on several public datasets demonstrate the superiority of our proposed WSC method over many state-of-the-arts for graph classification. Copyright © 2018, The Authors. All rights reserved.

关键词： Random processes

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UAV assisted bridge defect inspection system 3rd

UAV assisted bridge defect inspection system

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3rd International Conference on Intelligence Science, ICIS 2018

作者： Yang, Shuzhan Shen, Zhen Wang, Xiao Bai, Tianxiang Ji, Yingliang Jiang, Yuyi Liu, Xiwei Dong, Xisong Li, Chuanfu Han, Qi Lu, Jian Xiong, Gang State Key Laboratory of Management and Control for Complex Systems Institute of Automation Chinese Academy of Sciences Beijing100190 China Qingdao Academy of Intelligent Industries Qingdao266109 China College of Engineering Peking University Beijing100871 China University of Chinese Academy of Sciences Beijing100049 China Cloud Computing Center Chinese Academy of Sciences Dongguan523808 China Beijing Engineering Research Center of Intelligent Systems and Technology Institute of Automation Chinese Academy of Sciences Beijing100190 China Qingdao Expressway Qingdao266041 China Guangdong Launca Medical Device Technology Co. Ltd. Dongguan523808 China

ISBN: (纸本)9783030013127

Traditional bridge inspection methods require lane closures, inspection equipment, and most importantly the experiences and knowledge of the inspectors. This increases not only the inspection cost and time, but also the risk to the travelling public. Due to the lengthy and costly traditional bridge inspection methods, there has been an increasing backlog of inspection activities. In this research, we design an unmanned aerial vehicle (UAV) assisted bridge defect inspection system, in which a UAV can capture the image and transmit the information to the ground station for further analysis. The system can be divided into 2 subsystems: electromechanics & communication system, and image processing system. The electromechanics & communication systems ensure the self-locating, flight control, image transmission, and human intervention functions. The image processing system performs the image preprocessing, defect extraction, and provides the inspection report. This system, if put into practice, can save the cost up to 70%. We believe that the UAV assisted bridge inspection can be popular in the future. © IFIP International Federation for Information Processing 2018.

关键词： image processing

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Multimodal emotion recognition using deep canonical correlation analysis

arXiv

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arXiv 2019年

作者： Liu, Wei Qiu, Jie-Lin Zheng, Wei-Long Lu, Bao-Liang Center for Brain-Like Computing and Machine Intelligence Department of Computer Science and Engineering Shanghai Jiao Tong University Shanghai200240 China Key Laboratory of Shanghai Education Commission for Intelligent Interaction and Cognitive Engineering Shanghai Jiao Tong University Shanghai200240 China Brain Science and Technology Research Center Shanghai Jiao Tong University Shanghai200240 China Department of Electronic Engineering Shanghai Jiao Tong University Shanghai200240 China Department of Neurology Massachusetts General Hospital Harvard Medical School BostonMA02114 United States

Multimodal signals are more powerful than unimodal data for emotion recognition since they can represent emotions more comprehensively. In this paper, we introduce deep canonical correlation analysis (DCCA) to multimodal emotion recognition. The basic idea behind DCCA is to transform each modality separately and coordinate different modalities into a hyperspace by using specified canonical correlation analysis constraints. We evaluate the performance of DCCA on five multimodal datasets: the SEED, SEED-IV, SEED-V, DEAP, and DREAMER datasets. Our experimental results demonstrate that DCCA achieves state-of-the-art recognition accuracy rates on all five datasets: 94.58% on the SEED dataset, 87.45% on the SEED-IV dataset, 84.33% and 85.62% for two binary classification tasks and 88.51% for a four-category classification task on the DEAP dataset, 83.08% on the SEED-V dataset, and 88.99%, 90.57%, and 90.67% for three binary classification tasks on the DREAMER dataset. We also compare the noise robustness of DCCA with that of existing methods when adding various amounts of noise to the SEED-V dataset. The experimental results indicate that DCCA has greater robustness. By visualizing feature distributions with t-SNE and calculating the mutual information between different modalities before and after using DCCA, we find that the features transformed by DCCA from different modalities are more homogeneous and discriminative across emotions. Copyright © 2019, The Authors. All rights reserved.

关键词： Eye movements

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AGE Challenge: Angle Closure Glaucoma Evaluation in Anterior Segment Optical Coherence Tomography

arXiv

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arXiv 2020年

作者： Fu, Huazhu Li, Fei Sun, Xu Cao, Xingxing Liao, Jingan Orlando, José Ignacio Tao, Xing Li, Yuexiang Zhang, Shihao Tan, Mingkui Yuan, Chenglang Bian, Cheng Xie, Ruitao Li, Jiongcheng Li, Xiaomeng Wang, Jing Geng, Le Li, Panming Hao, Huaying Liu, Jiang Kong, Yan Ren, Yongyong Bogunović, Hrvoje Zhang, Xiulan Xu, Yanwu State Key Laboratory Zhongshan Ophthalmic Center Sun Yat-sen University Guangzhou510060 China Inception Institute of Artificial Intelligence Abu Dhabi United Arab Emirates Intelligent Healthcare Unit Baidu Beijing China School of Computer Science and Engineering South China University of Technology GuangzhouGuangdong China National Scientific and Technical Research Council CONICET Argentina Tandil Argentina School of Computer Science and Technology Hangzhou Dianzi University Hangzhou China Tencent Jarvis Lab Shenzhen China School of Software Engineering South China University of Technology Guangzhou China School of Biomedical Engineering Health Science Center Shenzhen University Shenzhen China School of Electronic and Information Engineering Shenzhen University Shenzhen China Department of Computer Science and Engineering Chinese University of Hong Kong Hong Kong School of Electronic and Information Engineering Soochow University Suzhou China Ningbo University Zhejiang China Ningbo Institute of Industrial Technology Chinese Academy of Sciences Zhejiang China Southern University of Science and Technology Shenzhen China Shanghai Jiaotong University Shanghai China Laboratory for Ophthalmic Image Analysis Department of Ophthalmology Medical University of Vienna Vienna Austria

Angle closure glaucoma (ACG) is a more aggressive disease than open-angle glaucoma, where the abnormal anatomical structures of the anterior chamber angle (ACA) may cause an elevated intraocular pressure and gradually leads to glaucomatous optic neuropathy and eventually to visual impairment and blindness. Anterior Segment Optical Coherence Tomography (AS-OCT) imaging provides a fast and contactless way to discriminate angle closure from open angle. Although many medical image analysis algorithms have been developed for glaucoma diagnosis, only a few studies have focused on AS-OCT imaging. In particular, there is no public AS-OCT dataset available for evaluating the existing methods in a uniform way, which limits the progress in the development of automated techniques for angle closure detection and assessment. To address this, we organized the Angle closure Glaucoma Evaluation challenge (AGE), held in conjunction with MICCAI 2019. The AGE challenge consisted of two tasks: scleral spur localization and angle closure classification. For this challenge, we released a large data of 4800 annotated AS-OCT images from 199 patients, and also proposed an evaluation framework to benchmark and compare different models. During the AGE challenge, over 200 teams registered online, and more than 1100 results were submitted for online evaluation. Finally, eight teams participated in the onsite challenge. In this paper, we summarize these eight onsite challenge methods and analyze their corresponding results in the two tasks. We further discuss limitations and future directions. In the AGE challenge, the top-performing approach had an average Euclidean Distance of 10 pixel (10µm) in scleral spur localization, while in the task of angle closure classification, all the algorithms achieved the satisfactory performances, especially, 100% accuracy rate for top-two performances. These artificial intelligence techniques were shown to have the potential to enable new developments in AS-OCT

关键词： Ophthalmology

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BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets

引用

Nature methods 2023年第6期20卷 824-835页

作者： Linus Manubens-Gil Zhi Zhou Hanbo Chen Arvind Ramanathan Xiaoxiao Liu Yufeng Liu Alessandro Bria Todd Gillette Zongcai Ruan Jian Yang Miroslav Radojević Ting Zhao Li Cheng Lei Qu Siqi Liu Kristofer E Bouchard Lin Gu Weidong Cai Shuiwang Ji Badrinath Roysam Ching-Wei Wang Hongchuan Yu Amos Sironi Daniel Maxim Iascone Jie Zhou Erhan Bas Eduardo Conde-Sousa Paulo Aguiar Xiang Li Yujie Li Sumit Nanda Yuan Wang Leila Muresan Pascal Fua Bing Ye Hai-Yan He Jochen F Staiger Manuel Peter Daniel N Cox Michel Simonneau Marcel Oberlaender Gregory Jefferis Kei Ito Paloma Gonzalez-Bellido Jinhyun Kim Edwin Rubel Hollis T Cline Hongkui Zeng Aljoscha Nern Ann-Shyn Chiang Jianhua Yao Jane Roskams Rick Livesey Janine Stevens Tianming Liu Chinh Dang Yike Guo Ning Zhong Georgia Tourassi Sean Hill Michael Hawrylycz Christof Koch Erik Meijering Giorgio A Ascoli Hanchuan Peng Institute for Brain and Intelligence Southeast University Nanjing China. Microsoft Corporation Redmond WA USA. Tencent AI Lab Bellevue WA USA. Computing Environment and Life Sciences Directorate Argonne National Laboratory Lemont IL USA. Kaya Medical Seattle WA USA. University of Cassino and Southern Lazio Cassino Italy. Center for Neural Informatics Structures and Plasticity Krasnow Institute for Advanced Study George Mason University Fairfax VA USA. Faculty of Information Technology Beijing University of Technology Beijing China. Beijing International Collaboration Base on Brain Informatics and Wisdom Services Beijing China. Nuctech Netherlands Rotterdam the Netherlands. Janelia Research Campus Howard Hughes Medical Institute Ashburn VA USA. Department of Electrical and Computer Engineering University of Alberta Edmonton Alberta Canada. Ministry of Education Key Laboratory of Intelligent Computation and Signal Processing Anhui University Hefei China. Paige AI New York NY USA. Scientific Data Division and Biological Systems and Engineering Division Lawrence Berkeley National Lab Berkeley CA USA. Helen Wills Neuroscience Institute and Redwood Center for Theoretical Neuroscience UC Berkeley Berkeley CA USA. RIKEN AIP Tokyo Japan. Research Center for Advanced Science and Technology (RCAST) The University of Tokyo Tokyo Japan. School of Computer Science University of Sydney Sydney New South Wales Australia. Texas A&M University College Station TX USA. Cullen College of Engineering University of Houston Houston TX USA. Graduate Institute of Biomedical Engineering National Taiwan University of Science and Technology Taipei Taiwan. National Centre for Computer Animation Bournemouth University Poole UK. PROPHESEE Paris France. Department of Neuroscience Columbia University New York NY USA. Mortimer B. Zuckerman Mind Brain Behavior Institute Columbia University New York NY USA. Department of Computer Science Northern Illinois Universit

BigNeuron is an open community bench-testing platform with the goal of setting open standards for accurate and fast automatic neuron tracing. We gathered a diverse set of image volumes across several species that is representative of the data obtained in many neuroscience laboratories interested in neuron tracing. Here, we report generated gold standard manual annotations for a subset of the available imaging datasets and quantified tracing quality for 35 automatic tracing algorithms. The goal of generating such a hand-curated diverse dataset is to advance the development of tracing algorithms and enable generalizable benchmarking. Together with image quality features, we pooled the data in an interactive web application that enables users and developers to perform principal component analysis, t-distributed stochastic neighbor embedding, correlation and clustering, visualization of imaging and tracing data, and benchmarking of automatic tracing algorithms in user-defined data subsets. The image quality metrics explain most of the variance in the data, followed by neuromorphological features related to neuron size. We observed that diverse algorithms can provide complementary information to obtain accurate results and developed a method to iteratively combine methods and generate consensus reconstructions. The consensus trees obtained provide estimates of the neuron structure ground truth that typically outperform single algorithms in noisy datasets. However, specific algorithms may outperform the consensus tree strategy in specific imaging conditions. Finally, to aid users in predicting the most accurate automatic tracing results without manual annotations for comparison, we used support vector machine regression to predict reconstruction quality given an image volume and a set of automatic tracings.

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An automatic biomedical ontology meta-matching technique

Journal of Network Intelligence

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Journal of Network Intelligence 2019年第3期4卷 109-113页

作者： Xue, Xingsi Yang, Haiyan Zhang, Jie Zhang, Jing Chen, Dongxu College of Information Science and Engineering Intelligent Information Processing Research Center Fujian Key Lab for Automotive Electronics and Electric Drive Fujian Provincial Key Laboratory of Big Data Mining and Applications Fujian University of Technology No.3 Xueyuan Road University Town Minhou Fuzhou CityFujian Province350118 China College of Information Science and Engineering Fujian University of Technology No.33 Xuefu South Road University Town Minhou Fuzhou CityFujian Province350118 China School of Computer Science and Engineering Yulin Normal University No.299 Education Middle Road Yulin CityGuanxi Province537000 China School of Computing Ulster University Jordanstown BT370QB United Kingdom Fujian Medical University Union Hospital No.29 Xinquan Road Gulou Fuzhou CityFujian Province350001 China

Biomedical ontology matching aims at determining the heterogeneous biomed-ical concepts, and bridging the semantic gap between heterogeneous biomedical ontologies. The foundation of a biomedical ontology matching technique is the Biomedical Concept Similarity Measure (BCSM), which calculates the similarity value between two biomed-ical concepts. Since various BCSMs have different advantages, usually several BCSMs are aggregated together to improve the result’s confidence. How to tune the aggregating weights to ensure the quality of the alignment is called biomedical ontology meta-matching problem, which is a challenge in the ontology matching domain. Currently, researchers mainly focus on how to tune the aggregating weights for various similarity measures to improve the quality of the ontology alignments. However, the ignorance of the effects brought about by different biomedical concept mapping’s preference on different similarity measures significantly reduces the alignment’s quality. To overcome this drawback, in this work, we formally define the biomedical ontology meta-matching problem, and then present an Ordered Weighted Average (OWA) based approach to automatically aggregate various biomedical concept similarity measures. In our method, the aggregating weights determined for each concept mapping is associated with the ordered position of the similarity value instead of a particular concept similarity measure. The experiment utilizes the large biomed track provided by Ontology Alignment Evaluation Initiative (OAEI) to test our proposal’s performance, and the experimental results show the effectiveness of our proposal. © 2019, Taiwan Ubiquitous Information. All rights reserved.

关键词： Semantics

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Multi-label inductive matrix completion for joint MGMT and IDH1 status prediction for glioma patients 1

引用

20th International Conference on medical image computing and Computer-Assisted Intervention, MICCAI 2017

作者： Chen, Lei Zhang, Han Thung, Kim-Han Liu, Luyan Lu, Junfeng Wu, Jinsong Wang, Qian Shen, Dinggang Jiangsu Key Laboratory of Big Data Security and Intelligent Processing Nanjing University of Posts and Telecommunications Nanjing China Department of Radiology and BRIC University of North Carolina Chapel Hill United States School of Biomedical Engineering Med-X Research Institute Shanghai Jiao Tong University Shanghai China Department of Neurosurgery Huashan Hospital Fudan University Shanghai China Shanghai Key Lab of Medical Image Computing and Computer Assisted Intervention Shanghai China

ISBN: (数字)9783319661858

ISBN: (纸本)9783319661841

MGMT promoter methylation and IDH1 mutation in high-grade gliomas (HGG) have proven to be the two important molecular indicators associated with better prognosis. Traditionally, the statuses of MGMT and IDH1 are obtained via surgical biopsy, which is laborious, invasive and time-consuming. Accurate presurgical prediction of their statuses based on preoperative imaging data is of great clinical value towards better treatment plan. In this paper, we propose a novel Multi-label Inductive Matrix Completion (MIMC) model, highlighted by the online inductive learning strategy, to jointly predict both MGMT and IDH1 statuses. Our MIMC model not only uses the training subjects with possibly missing MGMT/IDH1 labels, but also leverages the unlabeled testing subjects as a supplement to the limited training dataset. More importantly, we learn inductive labels, instead of directly using transductive labels, as the prediction results for the testing subjects, to alleviate the overfitting issue in small-sample-size studies. Furthermore, we design an optimization algorithm with guaranteed convergence based on the block coordinate descent method to solve the multivariate non-smooth MIMC model. Finally, by using a precious single-center multi-modality presurgical brain imaging and genetic dataset of primary HGG, we demonstrate that our method can produce accurate prediction results, outperforming the previous widely-used single- or multi-task machine learning methods. This study shows the promise of utilizing imaging-derived brain connectome phenotypes for prognosis of HGG in a non-invasive manner. © Springer International Publishing AG 2017.

关键词： Forecasting

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Availability analysis and optimization in CoMP and CA-enabled HetNets

Availability analysis and optimization in CoMP and CA-enable...

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作者： Jia, Jie Deng, Yansha Chen, Jian Aghvami, Abdol-Hamid Nallanathan, Arumugam Key Laboratory of Medical Image Computing Northeastern University Ministry of Education Shenyang110819 China School of Computer Science and Engineering Northeastern University Shenyang110819 China Department of Informatics King's College London LondonWC2R 2LS United Kingdom

Traditional cellular networks are moving toward heterogeneous cellular networks (HetNets) to satisfy the stringent demand for data rates and capacity. To enable the new applications in 5G, such as haptic communications, we face new challenges of achieving high availability with low latency in Het- Nets. In this paper, we introduce coordinated multi-point (CoMP) and carrier aggregation (CA) techniques in HetNets to guarantee the availability of all user equipment (UE), where the CoMP improves the single-path availability, and the CA enhances availability via multi-carrier gain combining. To characterize the availability, we first derive an exact closed-form expression for the availability of a random UE in a CoMP and CA-enabled HetNets. To achieve the maximum UE availability, we formulate a max- min optimization problem. To solve it, we then propose a two-step optimization algorithm (TSOA) and a joint (JTOA). The TSOA is based on heuristic algorithm for the optimal subcarrier assignment and UE association, and based on the Lagrangian dual method for the power allocation. The JTOA is based on genetic algorithm to achieve the interaction between the first step and the second step. Our results showcase the effective of our proposed JTOA, and the effective of the CoMP in availability improvement in HetNets. © 2017 IEEE.

关键词： Genetic algorithms

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