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Nitrogen vertical distribution by canopy reflectance spectrum in winter wheat

IOP Conference Series: Earth and Environmental Science 2014年第1期17卷

作者： W J Huang Q Y Yang D L Peng L S Huang D Y Zhang G J Yang Key Laboratory of Digital Earth Science Institute of Remote Sensing and Digital Earth Chinese Academy of Sciences Beijing 100094 China Key Laboratory of Intelligent Computing & Signal Processing Ministry of Education Anhui University Hefei 230039 Anhui China Beijing Agriculture Information Technology Research Center Beijing 100097 China

Nitrogen is a key factor for plant photosynthesis, ecosystem productivity and leaf respiration. Under the condition of nitrogen deficiency, the crop shows the nitrogen deficiency symptoms in the bottom leaves, while excessive nitrogen will affect the upper layer leaves first. Thus, timely measurement of vertical distribution of foliage nitrogen content is critical for growth diagnosis, crop management and reducing environmental impact. This study presents a method using bi-directional reflectance difference function (BRDF) data to invert foliage nitrogen vertical distribution. We developed upper-layer nitrogen inversion index (ULNI), middle-layer nitrogen inversion index (MLNI) and bottom-layer nitrogen inversion index (BLNI) to reflect foliage nitrogen inversion at upper layer, middle layer and bottom layer, respectively. Both ULNI and MLNI were made by the value of the ratio of Modified Chlorophyll Absorption Ration Index to the second Modified Triangular Vegetation Index (MCARI/MTVI2) referred to as canopy nitrogen inversion index (CNII) in this study at ±40° and ±50°, and at ±30° and ±40° view angles, respectively. The BLNI was composed by the value of nitrogen reflectance index (NRI) at ±20° and ±30° view angles. These results suggest that it is feasible to measure foliage nitrogen vertical-layer distribution in a large scale by remote sensing.

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A Model of Three Points for Location Estimation in Wireless Sensor Networks

A Model of Three Points for Location Estimation in Wireless ...

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2013 2nd International Symposium on Materials Science and Engineering technology(ISMSET 2013)

作者： Shaoguo Xie Yanjun Hu Yi Wang Fang Jiang Jingjing Liu Yingguan Wang Key Laboratory of Intelligent Computing & Signal Processing Ministry of Education An Hui University Key Laboratory of Wireless Sensor Network & Communication Shanghai Institute of Microsystem and Information Technology Chinese Academy of Sciences

In this paper, we propose a novel model of three points named TP for location estimation in wireless sensor networks(WSNs) with random deployment of anchor nodes. In this model, we select three anchor nodes which have the strongest received signal strength(RSS) for location estimation, the centroid algorithm and the method of intersection of judgment are used to estimate the location of unknown nodes. To further exploit three nearest intersection points in TP, the enhanced TP(ETP) is proposed. The simulation results show that the proposed models outperform MMSE and BML in terms of the localization accuracy for WSNs. Moreover, the localization accuracy of the proposed models in scenario 2 with random deployment of anchor nodes are better than in scenario 1 with planned deployment of anchor nodes. Additionally, compared with MMSE and BML, ETP and TP can reduce the environmental impact on location estimation.

关键词： Location estimation Anchor node Wireless sensor networks

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A graph-based multi-hop cooperative MIMO scheme for heterogeneous WSN

A graph-based multi-hop cooperative MIMO scheme for heteroge...

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6th China Conference of Wireless Sensor Networks, CWSN 2012

作者： Li, Zhetao Xie, Da Pei, Tingrui Choi, Youngjune Li, Renfa College of Information Engineering Xiangtan University Xiangtan 411105 China School of Computer National University of Defense Technology Changsha 410073 China Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education Xiangtan University Xiangtan 411105 China Department of Information and Computer Engineering Ajou University Suwon 443749 Korea Republic of School of Computers and Communications Hunan University Changsha 410082 China

ISBN: (纸本)9783642362514

A Graph-based multi-hop cooperative MIMO transmission scheme (GM-MIMO) aimed at optimizing the network lifetime and saving energy for heterogeneous wireless sensor networks (WSN) is proposed. In GM-MIMO, clusters are established based on geographical position. Graph theory is applied to find an optimal forwarding path. For taking the presence of node heterogeneity into consideration, GM-MIMO obtains maximum network lifetime. Simulation results show that GM-MIMO makes a significant performance improvement in terms of network lifetime and survival rate of nodes. © 2013 Springer-Verlag.

关键词： Graph theory

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DTCWT BASED MEDICAL ULTRASOUND IMAGES DESPECKLING USING LS PARAMETER OPTIMIZATION

DTCWT BASED MEDICAL ULTRASOUND IMAGES DESPECKLING USING LS P...

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IEEE International Conference on Image processing

作者： Yi Wang Xiaowei Fu Li Chen Sheng Ding Jing Tian College of Computer Science and Technology Wuhan University of Science and Technology Hubei Province Key Laboratory of Intelligent Information Processing and Real-time Industrial System Wuhan 430081 China

ISBN: (纸本)9781479923427

This paper presents a novel despeckling algorithm that can be used to enhance image quality in medical ultrasound images. Firstly, the log-transformed images are transformed by dual-tree complex wavelet transform (DTCWT). And then, we use a non-Gaussian statistical model with an adaptive smoothing parameter for ideal image signal in the transformed domain. According to Bayesian theory, the MAP estimator is obtained with a proposed adaptive threshold which has better despeckling performance by exploiting the interscale properties of wavelet coefficients. The proposed approach results in significant speckle reduction and preserve details of ultrasound images at the same time while the introduced distortions are not noticeable.

关键词： DTCWT medical ultrasound image despeckling LS images Ultrasonic Waves Maximum a posteriori estimation Ultrasonography image signal Bayes methods Image quality complex wavelet transform

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Genome-wide identification of cancer-related polyadenylated and non-polyadenylated RNAs in human breast and lung cell lines

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Science China(Life Sciences) 2013年第5期56卷 503-512,1-4页

作者： ZHAO GuoGuang JIAO Fei LIAO Qi LUO HaiTao LI Hui SUN Liang BU DeChao YU KunTao ZHAO Yi CHEN RunSheng Bioinformatic Research Group Key Laboratory of Intelligent Information ProcessingAdvanced Computing Research LaboratoryInstitute of Computing TechnologyChinese Academy of Sciences University of Chinese Academy of Sciences Department of Biochemistry and Molecular Biology Binzhou Medical College Department of Preventive Medicine School of MedicineNingbo University College of Computer Science and Technology Jilin University Bioinformatics Laboratory and National Laboratory of Biomacromolecules Institute of BiophysicsChinese Academy of SciencesBeijing 100101China

Eukaryotic mRNAs consist of two forms of transcripts:poly(A)+ and poly(A),based on the presence or absence of poly(A) tails at the 3 ***(A)+ mRNAs are mainly protein coding mRNAs,whereas the functions of poly(A) mRNA are largely *** studies have shown that a significant proportion of gene transcripts are poly(A) or bimorphic(containing both poly(A)+ and poly(A) transcripts).We compared the expression levels of poly(A) and poly(A)+ RNA mRNAs in normal and cancer cell *** also investigated the potential functions of these RNA transcripts using an integrative workflow to explore poly(A)+ and poly(A) transcriptome sequences between a normal human mammary gland cell line(HMEC) and a breast cancer cell line(MCF-7),as well as between a normal human lung cell line(NHLF) and a lung cancer cell line(A549).The data showed that normal and cancer cell lines differentially express these two forms of *** ontology(GO) annotation analyses hinted at the functions of these two groups of transcripts and grouped the differentially expressed genes according to the form of their *** data showed that cell cycle-,apoptosis-,and cell death-related functions corresponded to most of the differentially expressed genes in these two forms of transcripts,which were also associated with the ***,translational elongation and translation functions were also found for the poly(A) protein-coding genes in cancer cell *** demonstrate that poly(A) transcripts play an important role in cancer development.

关键词： polyadenylation non-polyadenylation function annotation high throughput sequencing cancer bioinformatics

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pNovo+: De Novo Peptide Sequencing and Assembly Using Complementary HCD and ETD Tandem Mass Spectra

pNovo+: De Novo Peptide Sequencing and Assembly Using Comple...

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第八届中国蛋白质组学大会

作者： Hao Chi Haifeng Chen Kun He Long Wu Bing Yang Rui-Xiang Sun Jianyun Liu Wen-Feng Zeng Chun-Qing Song Si-Min He Meng-Qiu Dong Key Lab of Intelligent Information Processing Institute of Computing TechnologyChinese Academy of SciencesBeijing 100190China National Institute of Biological SciencesBeijingBeijing 102206China Laboratory of Intelligent Recognition and Image ProcessingBeijing Key Laboratory of Digital MediaBeihang UniversityBeijing100191China

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Sentimental Space Based Analysis of User Personalized Sentiments

Sentimental Space Based Analysis of User Personalized Sentim...

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International Conference on Semantics, Knowledge and Grid (SKG)

作者： Xinzhi Wang Xiangfeng Luo School of Computer Engineering and Science Shanghai University Shanghai China Key Laboratory of Intelligent Information Processing Institute of Computing Technology hinese Academy of Sciences Beijing China

With the development of social media, online documents such as the comments of news articles, blogs and microblogs have received great attention, and the sentiment analysis via online documents has become one popular research area. This paper focuses on establishing user sentimental space obtained from online documents to analyze user's personalized sentiments, which aims to identify user's sentimental feature. Affection, sentiment and attributes of user are firstly employed to build user's personalized sentimental space. Then, the general constrains of user sentiments space are proposed to calculate user's personality. And finally we seek out sentimental leaders who paly pivotal role in the leading public opinions. Our works can give some suggestions for decision makers when urgent event happen.

关键词： Feature extraction Vectors Aerospace electronics Controllability Asymptotic stability Stability analysis Fluctuations

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INSTANCE-SPECIFIC CANONICAL CORRELATION ANALYSIS FOR POSE ALIGNMENT

INSTANCE-SPECIFIC CANONICAL CORRELATION ANALYSIS FOR POSE AL...

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IEEE International Conference on Image processing

作者： Deming Zhai Hong Chang Xilin Chen Wen Gao School of Computer Science and Technology Harbin Institute of Technology Harbin China 150001 Key Laboratory of Intelligent Information Processing Institute of Computing Technology Chinese Academy of Sciences (CAS) Beijing China 100080

ISBN: (纸本)9781479923427

Canonical correlation analysis (CCA) based methods achieve great success for pose alignment. However, CCA has limitations as a linear and global algorithm. Although some variants have been proposed to overcome the limitations, neither of them achieves locality and nonlinearity at the same time. In this paper, we propose a novel algorithm called Instance-Specific Canonical Correlation Analysis (ISCCA), which approximates the nonlinear data by computing the instance specific projections along the smooth curve of the manifold. Based on the framework of least squares regression, CCA is extended to the instance-specific case which obtains a set of locally-linear smooth but globally-nonlinear transformations. The optimization problem is proved to be convex and could be solved efficiently by alternating optimization. And the globally optimal solutions could be achieved with theoretical guarantee. Experimental results for pose alignment demonstrate the effectiveness of our proposed method.

关键词： proposed alignment transofrmations Alignment Posing optimal solution multivariate analysis nonlinearity Manifolds Convexity

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Using Chou’s Pseudo Amino Acid Composition for Protein Remote Homology Detection

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Engineering（科研） 2013年第10期5卷 149-153页

作者： Bin Liu Xiaolong Wang School of Computer Science and Technology Harbin Institute of Technology Shenzhen Graduate School Shenzhen Guangdong China Key Laboratory of Network Oriented Intelligent Computation Harbin Institute of Technology Shenzhen Graduate School Shenzhen Guangdong China Shanghai Key Laboratory of Intelligent Information Processing Shanghai China School of Computer Science and Technology Harbin Institute of Technology Shenzhen Graduate School Shenzhen Guangdong China Key Laboratory of Network Oriented Intelligent Computation Harbin Institute of Technology Shenzhen Graduate School Shenzhen Guangdong China

Protein remote homology detection is a key problem in bioinformatics. Currently, the discriminative methods, such as Support Vector Machine (SVM), can achieve the best performance. The most efficient approach to improve the performance of the SVM-based methods is to find a general protein representation method that is able to convert proteins with different lengths into fixed length vectors and captures the different properties of the proteins for the discrimination. The bottleneck of designing the protein representation method is that native proteins have different lengths. Motivated by the success of the pseudo amino acid composition (PseAAC) proposed by Chou, we applied this approach for protein remote homology detection. Some new indices derived from the amino acid index (AAIndex) database are incorporated into the PseAAC to improve the generalization ability of this method. Our experiments on a well-known benchmark show this method achieves superior or comparable performance with current state-of-the-art methods.

关键词： Protein Remote Homology Support Vector Machine Pseudo Amino Acid Composition Protein Representation

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Distributed Query processing in an Ad-hoc Semantic Web Data Sharing System

Distributed Query Processing in an Ad-hoc Semantic Web Data ...

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IEEE International Symposium on Parallel and Distributed processing Workshops and Phd Forum (IPDPSW)

作者： Jing Zhou Gregor V. Bochmann Zhongzhi Shi The Key Laboratory of Intelligent Information Processing Institute of Computing Technology Chinese Academy of Sciences Beijing China School of Electrical Engineering and Computer Science University of Ottawa Ontario Canada

ISBN: (纸本)9781479913725

Sharing the Semantic Web data in proprietary datasets in which data is encoded in RDF triples in a decentralized environment calls for efficient support from distributed computing technologies. The highly dynamic ad-hoc settings that would be pervasive for Semantic Web data sharing among personal users in the future, however, pose even more demanding challenges for the enabling technologies. We extend previous work on a hybrid P2P architecture for an ad-hoc Semantic Web data sharing system which better models the data sharing scenario by allowing data to be maintained by its own providers and exhibits satisfactory scalability owing to the adoption of a two-level distributed index and hashing techniques. Additionally, we propose efficient distributed processing of SPARQL queries in such a context and explore optimization techniques that build upon distributed query processing for database systems and relational algebra optimization. We anticipate that our work will become an indispensable, complementary approach to making the Semantic Web a reality by delivering efficient data sharing and reusing in an ad-hoc environment.

关键词： Peer-to-peer computing Resource description framework Indexes Query processing Distributed databases Optimization

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