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Research on DNA sequence homology based on second order Markov model

Journal of Fiber Bioengineering and Informatics 2015年第3期8卷 539-546页

作者： Zhang, Junyan Yang, Chenhui College of Computer Science Chengdu University Chengdu China Key Laboratory of Pattern Recognition and Intelligent Information Processing of Sichuan Chengdu University Chengdu China

DNA sequence homology is a critical and fundamental problem in bioinformatics. In this paper, we solve this problem by use of the second order Markov modal instead of traditional sequence alignment because DNA character sequence meets the Markov properties. Hence, the characteristics of DNA sequences are represented by using their two-step transition probabilities matrices. The similarity degree measurement between two different DNA sequences is defined. Our DSHM algorithm is put forward which is implemented by MyEclipse. The contrast experiments are done between DSHM and other two methods. The experimental results show that DSHM algorithm can determine DNA sequence homology correctly in the more effective way. © 2015 Binary Information Press & Textile Bioengineering and Informatics Society.

关键词： DNA sequences

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An improved K-OPT local search algorithm for the vertex separator problem

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Journal of Computational and Theoretical Nanoscience 2015年第11期12卷 4942-4958页

作者： Zhang, Zhiqiang Shao, Zehui Key Laboratory of Pattern Recognition and Intelligent Information Processing Institutions of Higher Education of Sichuan Province China School of Computer Science Chengdu University Chengdu610106 China

A vertex separator in an undirected graph is a subset of the vertices, whose removal disconnects the graph in at least two nonempty connected components. Given a connected undirected graph G = (V ,E) with |V| = n, an integer 1 ≤ b ≤ n, the vertex separator problem (VSP) asks to find a partition of V into disjoint sets A, B, C, with A and B nonempty, such that (1) E contains no edge (i, j) with i A, j ? B, (2) max{|A|} |B|} = b, (3) |C| is minimized. The vertex separator problem is a classic NP complete problem. It is widely applied to circuit design, computer network communication, protein combination in bioinformatics, etc. At present there has already been exact algorithm to search vertex separator of undirected graph, while there are only few heuristic algorithms. Aiming at the VSP and a solution design for heuristic algorithm, this paper designs an improved K-OPT local search algorithm. In order to compare the searching efficiency of a variety of heuristic algorithms for VSP, this paper also designs simulated annealing algorithm and variable neighborhood search algorithm, and performs comparative experiments on these algorithms using DIMACS graph, MATRIXMARKET graph, MIPLIB graph. The experimental results show that the improved K-OPT local search algorithm goes the best. In the experiment, using improved K-OPT local search algorithm, existing Relax-and-Cut algorithm is further compared, whose experimental results show that in some graph tests, the improved K-OPT local search algorithm goes better than Relax-and-Cut algorithm. © 2015 American Scientific Publishers.

关键词： Undirected graphs

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Theory of ϕ-Jensen variance and its applications in higher education

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Journal of Inequalities and Applications 2015年第1期2015卷 1-40页

作者： Wen, JiaJin Huang, Yi Cheng, Sui Sun Institute of Mathematical Inequalities and Applications College of Mathematics and Computer Science Chengdu University Chengdu 610106 China Key Laboratory of Pattern Recognition and Intelligent Information Processing of Higher Education Institutions of Sichuan Province College of Mathematics and Computer Science Chengdu University Chengdu 610106 China Department of Mathematics Tsing Hua University Hsinchu 30043 Taiwan

This paper introduces the theory of ϕ-Jensen variance. Our main motivation is to extend the connotation of the analysis of variance and facilitate its applications in probability, statistics and higher education. To this end, we first introduce the relevant concepts and properties of the interval function. Next, we study several characteristics of the log-concave function and prove an interesting quasi-log concavity conjecture. Next, we introduce the theory of ϕ-Jensen variance and study the monotonicity of the interval function JVar_ϕ φ(X_[a,b]) by means of the log concavity. Finally, we demonstrate the applications of our results in higher education, show that the hierarchical teaching model is ‘normally’ better than the traditional teaching model under the appropriate hypotheses, and study the monotonicity of the interval function Var A (X_[a,b]). © 2015, Wen et al.

关键词： hierarchical teaching model interval function k-normal distribution truncated random variable ϕ-Jensen variance

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Blind source separation with evolution based KICA

Blind source separation with evolution based KICA

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Asia Pacific Conference on Multimedia and Broadcasting (APMediaCast)

作者： Peng Wu Qian Yin Ping Guo Image Processing and Pattern Recognition Laboratory Beijing Normal University Beijing China Shandong Provincial Key Laboratory of Network based Intelligent Computing University of Jinan Jinan China

ISBN: (纸本)9781479979684

Kernel independent component analysis (KICA) has been widely used in the field of blind source separation. The selection of kernel function and its parameters plays an important role in KICA algorithm performance. An optimal kernel model should be rich enough to well map the given samples. However, users usually use a singular kernel based model in their experiments, which leads to a suboptimal kernel model. In order to solve this problem, we propose the evolution based multiple kernel independent component analysis (EMKICA), in which a convex combination of multiple base kernels is used instead of single kernel of KICA. The combination weights are learned by particle swarm optimization algorithm. Firstly, we elaborate the basic theory of KICA and concept of EMKICA, also the combination form of the composition kernel used in EMKICA. Secondly, we describe the presentation of the individuals in the particle swarm optimization algorithm, the settings of the evaluation function and general algorithm. Finally, we evaluate the separation ability of EMKICA on three different data sets including one-dimensional mixed signals, composite images and images with reflection. The experimental results verify the effectiveness of EMKICA.

关键词： Kernel Independent component analysis Algorithm design and analysis Multimedia communication Correlation Optimization Asia

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Detection Level of Apple Based on BP Neural Network

Detection Level of Apple Based on BP Neural Network

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International Conference on Information Sciences,Machinery,Materials and Energy（ICISMME 2015）

作者： Xiaoling LI Jimin YUAN School of Computer Science and Technology Chengdu University University Key Laboratory of Pattern Recognition and Intelligent information Processing The Department Computer Engineering Chengdu Aeronautic Vocational and Technical College

In view of the draw backs of apple grade identification in China,which still relies on photoelectric sorting and manual separation,this paper presents a processing method on the basis of the technology of computer vision and digital *** image processing technology,the researcher calculated the length of the long-short-axis,marked the location of it and calculated the 4 parameters,color,mean square,shape,size,as the key characteristics of the BP input of network to build a network and identify the level of apple through analysis of the external characteristics of *** optimum structure parameters of the BP neural network which had 9 hidden layer neurons were determined by RP training *** showed that average accuracy for fruit classification can reach 92.5% by using this model,and the executing time of microcomputer for grading of one apple is 9.3 *** method has the characteristics of high accuracy and good real-time performance.

关键词： characteristic parameter BP neural network apple detect level

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Feasible Study on Hybrid Power of Electric Vehicle Based on Aluminum Air Fuel Cell

Feasible Study on Hybrid Power of Electric Vehicle Based on ...

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IEEE International Conference on Applied Superconductivity and Electromagnetic Devices

作者： Yu Ping Zhang Yi Mou Zhong Xiao Yang Yu Hua Wei Tao Liu Dong Chen Pattern Recognition and Intelligent Control Laboratory University of Electronic Science and Technology of China

ISBN: (纸本)9781467381086

Aluminum air fuel cell has several characters as a kind of new energy, such as large specific energy, rich fuel source, low environmental pollution and so on. The character of high specific energy could extend driving range of electric vehicle, but a low specific power with aluminum air fuel cell demands it should cooperate with lithium ion battery and super capacitor, which export higher power to drive the electronic vehicle. As a rechargeable power supply, lithium ion battery and super capacitor can effectively recycle energy at braking mode, so that they can step to extend driving range.

关键词： Aluminum air fuel cell Specific energy Specific power Lithium ion battery Super capacitor Recycle energy

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Corrigendum to ‘Modeling the packing coloring problem of graphs’ [Appl. Math. Model. 39 (2015) 3588–3595]

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Applied Mathematical Modelling 2016年第2期40卷 1683-1683页

作者： Zehui Shao Aleksander Vesel School of Information Science and Technology Chengdu University Chengdu 610106 China Key Laboratory of Pattern Recognition and Intelligent Information Processing Institutions of Higher Education of Sichuan Province China Faculty of Natural Sciences and Mathematics University of Maribor Maribor Slovenia

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Smart electric valve controller based on all digital phase-locked loop

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Sensors and Transducers 2014年第2期165卷 89-95页

作者： Xiaoling, Li School of Computer Science and Technology Chengdu University Chengdu 610106 China University Key Laboratory of Pattern Recognition and Intelligent information Processing Chengdu 610106 China

Electric valve has been applied to various occasions and domains. In some adverse environments where such defects of traditional control system as low efficiency and poor safety have been exposed, optical encoder is adopted to detect the motor's angular speed and displacement and ADPLL is used for generating control logic, so as to regulate switching frequency and duty ratio of pulse wavelength modulation (PWM), alter the motor's input voltage and current and achieve the open and close control of Electric valve. The system can automatically regulate the rotating speed and the dragging torque of motor based on the open and close position, rotating speed and torque of the valve to make sure that the motor can achieve the best rotating speed and torque. The results of the test by motor 90ZY24-200 prove that the system has prompt response, high accuracy, little harmonic and ripple range;it can also automatically adapt to the torque alteration to realize the protective function of direct current (DC) motor. Electric valve control based on ADPLL can not only realize functions of the whole system, but also enjoys a stable and reliable performance. It can reduce the harmonic and ripple, and help the whole system achieve real-time remote control, data collection and transmission, and display the motor torque in LED, so as to control the valve flow stably and accurately through DC motor. © 2014 IFSA Publishing, S. L.

关键词： Locks (fasteners)

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On the Roman domination numbers of generalized Petersen graphs

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Journal of Combinatorial Mathematics and Combinatorial Computing 2014年 89卷 311-320页

作者： Zhang, Zhiqiang Shao, Zehui Xu, Xiaodong Key Laboratory of Pattern Recognition and Intelligent Information Processing Sichuan Province School of Information Science and Technology Chengdu University Chengdu 610106 China Academy of Sciences Nanning 530007 China

For natural numbers n and k, where n > 2k, a generalized Petersen graph P(n,k) is obtained by letting its vertex set be {u1,u 2,..,un} ∪ {u1,v2..,u n} and its edge set be the union of vi v i+1,uivi,ViVi+k over 1 ≤ i ≤ n, where subscripts are reduced modulo n. In this paper, an integer programming formulation for Roman domination is established, which is used to give upper bounds for the Roman domination numbers of the generalized Petersen graphs P(n,3) and P(n,4). Together with the dynamic algorithm, we determine the Roman domination number of the generalized Petersen graph P(n, 3) for n ≥ 5.

关键词： Integer programming

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Shape driven kernel adaptation in Convolutional Neural Network for robust facial trait recognition

Shape driven kernel adaptation in Convolutional Neural Netwo...

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Conference on Computer Vision and pattern recognition (CVPR)

作者： Shaoxin Li Junliang Xing Zhiheng Niu Shiguang Shan Shuicheng Yan Department of Electrical and Computer Engineering National University of Singapore Singapore Key Lab of Intelligent Information Processing of Chinese Academy of Sciences (CAS) Institute of Computing Technology CAS Beijing China National Laboratory of Pattern Recognition Institute of Automation CAS Beijing China

ISBN: (纸本)9781467369657

One key challenge of facial trait recognition is the large non-rigid appearance variations due to some irrelevant real world factors, such as viewpoint and expression changes. In this paper, we explore how the shape information, i.e. facial landmark positions, can be explicitly deployed into the popular Convolutional Neural Network (CNN) architecture to disentangle such irrelevant non-rigid appearance variations. First, instead of using fixed kernels, we propose a kernel adaptation method to dynamically determine the convolutional kernels according to the spatial distribution of facial landmarks, which helps learning more robust features. Second, motivated by the intuition that different local facial regions may demand different adaptation functions, we further propose a tree-structured convolutional architecture to hierarchically fuse multiple local adaptive CNN subnetworks. Comprehensive experiments on WebFace, Morph II and MultiPIE databases well validate the effectiveness of the proposed kernel adaptation method and tree-structured convolutional architecture for facial trait recognition tasks, including identity, age and gender recognition. For all the tasks, the proposed architecture consistently achieves the state-of-the-art performances.

关键词： Kernel Shape Face Face recognition Robustness Neural networks Computer architecture

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