检索结果-内蒙古大学图书馆

arXiv 2023年

作者： Liu, Yuan Shen, Hong-Bin Institute of Image Processing and Pattern Recognition Shanghai Jiao Tong University Key Laboratory of System Control and Information Processing Ministry of Education of China Shanghai China

The advent of highly accurate protein structure prediction methods has fueled an exponential expansion of the protein structure database. Consequently, there is a rising demand for rapid and precise structural homolog search. Traditional alignment-based methods are dedicated to precise comparisons between pairs, exhibiting high accuracy. However, their sluggish processing speed is no longer adequate for managing the current massive volume of data. In response to this challenge, we propose a novel deep-learning approach FoldExplorer. It harnesses the powerful capabilities of graph attention neural networks and protein large language models for protein structures and sequences data processing to generate embeddings for protein structures. The structural embeddings can be used for fast and accurate protein search. And the embeddings also provide insights into the protein space. FoldExplorer demonstrates a substantial performance improvement of 5% to 8% over the current state-of-the-art algorithm on the benchmark datasets. Meanwhile, FoldExplorer does not compromise on search speed and excels particularly in searching on a large-scale dataset. Copyright © 2023, The Authors. All rights reserved.

关键词： Embeddings

来源：评论

学校读者我要写书评

暂无评论

pattern Matching with Wildcard Gaps Based on Cross List

Pattern Matching with Wildcard Gaps Based on Cross List

引用

International Symposium on Computational Intelligence and Design, ISCID

作者： Junyan Zhang Chenhui Yang Information Science and Technology College Chengdu University Chengdu China Key Laboratory of Pattern Recognition and Intelligent Information Processing of Sichuan Chengdu University Chengdu China

pattern matching is a fundamental application text retrieval, string query, biological sequence analysis, etc. Therefore, the effective algorithm performing this kind of matching is in great need. In this paper, the wildcard is defines to match any one character in a sequence. Multiple wildcards form a gap. The length of a flexible gap is arbitrary. We design CLPM algorithm by use of cross list index structure to realize pattern matching with flexible wildcard gaps. The preprocessing algorithm is designed to initialize cross list so as to reduce searching space. In CLPM algorithm, the effective intervals is defined and computed based on the start positions of each sub pattern in each string, which help to obtain matching result set. Moreover, the approximate pattern matching is converted to short extract pattern matching. The contrast experiments are done based on DBLP tile data set. The results show that CLMP algorithm has better performance in the same fields.

关键词： pattern matching Indexes Silicon Algorithm design and analysis Approximation algorithms Presses Educational institutions

来源：评论

学校读者我要写书评

暂无评论

The method of image restoration in the environments of dust

The method of image restoration in the environments of dust

引用

International Conference on Mechatronics and Automation

作者： Wang, Yuanyu Li, Yuanzong Zhang, Tianxu Department of Computer Fundamental Education TaiYuan University of Technology TaiYuan CO 030024 China College of Mechanical Engineering TaiYuan University of Technology TaiYuan CO 030024 China Institute for Pattern Recognition and A.I. State Key Laboratory of Image Processing and Intelligent Control HuaZhong University of Science and Technology WuHan CO 430074 China

ISBN: (纸本)9781424451418

In order to solve the problem of image degradation caused by dust environments, an image degradation model considering multiple scattering factors caused by dust was first established using the first-order multiple scattering method. Then, a dark channel prior principle was applied to present an image restoration algorithm based on the image degradation model. Finally, a particle swarm optimization algorithm was applied to optimize the atmospheric light and the exposure parameters. This optimization algorithm was established according to the criterion of the image evaluation based on kirsch operator with dual threshold. By using the method an optimistic result of image restoration was obtained. The experimental results have shown that the method not only enhanced luminance and contrast, but also discovered more detail edges information. The method provided a foundation for target recognition in the dust environments. © 2010 IEEE.

关键词： Dust

来源：评论

学校读者我要写书评

暂无评论

Isoform Function Prediction Based on Heterogeneous Graph Attention Networks

Isoform Function Prediction Based on Heterogeneous Graph Att...

引用

2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023

作者： Guo, Kuo Li, Yifan Chen, Hao Shen, Hong-Bin Yang, Yang Shanghai Jiao Tong University Key Lab. of Shanghai Education Commission for Intelligent Interaction and Cognitive Engineering Department of Computer Science and Engineering Shanghai200240 China Shanghai Jiao Tong University Key Laboratory of System Control and Information Processing Ministry of Education of China Institute of Image Processing and Pattern Recognition Shanghai200240 China Carnegie Mellon University School of Computer Science Computational Biology Department PittsburghPA15213 United States

ISBN: (纸本)9798350337488

Isoforms refer to different mRNA molecules transcribed from the same gene, which can be translated into proteins with varying structures and functions. Predicting the functions of isoforms is an essential topic in bioinformatics as it can provide valuable insights into the intricate mechanisms of gene regulation and biological processes. Conventionally, gene function labels are standardized in Gene Ontology (GO) terms. However, traditional methods for predicting isoform function are largely limited by the absence of isoform-specific labels, sparse annotations, and the vast number of GO terms. To address these issues, we propose HANIso, a deep learning-based method for isoform function prediction. HANIso leverages a pretrained protein language model to extract features from protein sequences. It also integrates heterogeneous information, such as isoform sequence features, GO annotations, and isoform interaction data, using a Heterogeneous Graph Attention Network (HAN). This allows the model to learn the importance of different sources of information and their semantic relationships through the attention mechanism. Our method can predict function labels at both the gene level and isoform level. We conduct experiments on two species datasets, and the results demonstrate that our method outperforms existing methods on both AUROC and AUPRC. HANIso has the potential to overcome the limitations of traditional methods and provide a more accurate and comprehensive understanding of isoform function. © 2023 IEEE.

关键词： alternative splicing gene ontology heterogeneous graph attention network isoform function prediction protein language model

来源：评论

学校读者我要写书评

暂无评论

One efficient facet-based small target detection technique

One efficient facet-based small target detection technique

引用

International Conference on Signal Processing Proceedings (ICSP)

作者： Sheng Zheng ChengYi Xiong JinWen Tian Jian Liu State Education Commission Key Laboratory of Image Processing and Intelligent Control Institute of Pattern Recognition and Artificial Intelligence Huazhong University of Science and Technology Wuhan China

This paper presents a method for the detection of small objects from the infrared images. The detection is performed on the intensity surface well fitted by the cubic facet model. The small target energy distribution presents as a convex surface on the image intensity surface and the target center is the maximal extremum points of the convex surface. According to the extremum theory, the possible small target position is analytically determined by directly convolving the original image with the derivative operators deduced from the bivariate cubic function. With the available coarse target locations, the potential target is separated from the background by examining the intensity features of the target cluster. Experimental results on the sample infrared images demonstrate the proposed algorithm provides a robust and efficient performance.

关键词： Face detection Object detection Target tracking Infrared detectors Surface topography Infrared imaging Maintenance intelligent control pattern recognition Artificial intelligence

来源：评论

学校读者我要写书评

暂无评论

Dynamic Action recognition Under Simulated Prosthetic Vision

Dynamic Action Recognition Under Simulated Prosthetic Vision

引用

International Conference on Networking and Network Applications (NaNA)

作者： Ying Zhao Dantong Xu Tie Wang Yanchun Ren Inner Mongolia Key Laboratory of Pattern Recognition and Intelligent Image Processing School of Information Engineering Inner Mongolia University of Science and Technology Baotou Inner Mongolia

ISBN: (数字)9781728189543

ISBN: (纸本)9781728189550

Purpose. To assess the recognition pattern of dynamic action by visual prosthesis' wearers. Methods. Twenty volunteers (classified by gender and experience) were recruited to carried out action recognition test in simulated prosthetic vision. Twenty-three common dynamic actions video clips usually see in daily life were selected and formed the experimental action set which was divided into three parts including combined actions, simple actions and difficult actions in turn. The action animations made by 3D Studio Max were recorded by Banicam to convert to MP4 video format and processed to phosphene video clips by MATLAB in different resolutions (16 × 16, 24 × 24, 32 × 32, 48 × 48, 64 × 64, 128 × 128). Result. Comparing the recognition results, male group and female group had no significant difference. 48 × 48 resolution was the considerable latent capacity which subjects had stable performance. After a period of study, the performance of prosthesis wearers could be improved significantly.

关键词： Three-dimensional displays Visual prosthesis Animation pattern recognition Matlab

来源：评论

学校读者我要写书评

暂无评论

Skeleton-based fast path planning for UAV

Skeleton-based fast path planning for UAV

引用

MIPPR 2009 - Remote Sensing and GIS Data Processing and Other Applications: 6th International Symposium on Multispectral Image Processing and pattern recognition

作者： Liu, Xin Zhou, Chengping Ding, Mingyue Cai, Chao Institute for Pattern Recognition and Artificial Intelligence National Lab. for Multi-spectral Information Processing Technologies Huazhong University of Science and Technology Wuhan 430074 China College of Life Science and Technology Image Processing and Intelligent Control Key Laboratory of Education Ministry of China Huazhong University of Science and Technology Wuhan 430074 China

ISBN: (纸本)9780819478092

A new path planning method for UAV in static workspace is presented. The method can find a nearly optimal path in short time which satisfies the UAV kinematic constraints. The method makes use of the skeletons to construct the graph of the planning space considering the configuration of the obstacles and utilizes the graph to find a shortest collision-free path, and a novel technique is utilized to convert the free path into a feasible path. The method can be applied to different applications and easy to be implemented. Experimental results showed that the path planning can be done in a fraction of second on a contemporary workstation (2-3 seconds) under the condition of satisfying the kinematic constraints. © 2009 Copyright SPIE - The International Society for Optical Engineering.

关键词： Motion planning

来源：评论

学校读者我要写书评

暂无评论

SliceProp: A Slice-Wise Bidirectional Propagation Model for Interactive 3D Medical Image Segmentation 1

SliceProp: A Slice-Wise Bidirectional Propagation Model for ...

引用

1st IEEE International Conference on Medical Artificial Intelligence, MedAI 2023

作者： Xu, Xin Lu, Wenjing Lei, Jiahao Qiu, Peng Shen, Hong-Bin Yang, Yang Shanghai Jiao Tong University Key Lab. of Shanghai Education Commission for Intelligent Interaction and Cognitive Engineering Department of Computer Science and Engineering Shanghai200240 China Shanghai Ninth People's Hospital Shanghai Jiao Tong University School of Medicine Department of Vascular Surgery China Shanghai Jiao Tong University Institute of Image Processing and Pattern Recognition Key Laboratory of System Control and Information Processing Ministry of Education of China Shanghai200240 China

ISBN: (纸本)9798350358780

Interactive medical image segmentation methods have become increasingly popular in recent years. These methods combine manual labeling and automatic segmentation, reducing the workload of annotation while maintaining high accuracy. However, most current interactive segmentation frameworks are limited to 2D image data, and are not suitable for 3D image data due to the large size and high complexity of 3D data, as well as the challenges posed by information asymmetry and sparse annotation. In this paper, we propose SliceProp, an interactive segmentation framework that implements slice-wise Label Bidirectional Propagation (LBP) for 3D medical image segmentation. SliceProp extends the interactive 2D image segmentation algorithm to 3D image segmentation, and can handle 3D data with large size and high complexity. Moreover, equipped with a Backtracking Feedback Check (BFC) module, SliceProp effectively addresses the issues of information asymmetry and spatial sparse annotation in 3D medical image segmentation. Additionally, we adopt an uncertainty-based criterion to pri-oritize the slices to be refined interactively, which enhances the efficiency of the interaction process by enabling the model to focus on the regions with the most unreliable predictions. SliceProp is evaluated on two datasets and achieves promising results compared to state-of-the-art methods. © 2023 IEEE.

关键词： Medical imaging

来源：评论

学校读者我要写书评

暂无评论

A new roadmap constitution method based on dividing grid and level-set

A new roadmap constitution method based on dividing grid and...

引用

International Symposium on Intelligence Information Processing and Trusted Computing

作者： Li, Shidong Ding, Mingyue Cai, Chao Institute for Information Engineering of Hubei University for Nationalities Enshi Hubei China Institute for Pattern Recognition and Artificial Intelligence National Lab. for Multi-spectral Information Processing Technologies HUST Wuhan China College of Life Science and Technology Image Processing and Intelligent Control Key Laboratory of Education Ministry of China HUST Wuhan China

ISBN: (纸本)9780769541969

Roadmap methods were widely used in route planning fields, both for robots and unmanned aircrafts. Traditional roadmap is constituted by connecting the vertexes of convex obstacle, which is related to the locations of start and goal of route, so the roadmap can not be reused when anyone of start and goal changed. Absence of reusability reduces the efficiency of route planning by using roadmap. A new roadmap constitution method was proposed in this paper, which is build on dividing the 2D configuration space into multi-scale grids and setting nodes of roadmap on grid boundary using Level-Set method, same method was used to construct the map cells of roadmap between any two nodes lays on same grid . The roadmap constituted with new method can be reused when the start or goal was changed;it is efficient for replanning problem. © 2010 IEEE.

关键词： Reusability

来源：评论

学校读者我要写书评

暂无评论

Person re-identification across multi-camera system based on local descriptors

Person re-identification across multi-camera system based on...

引用

ACM/IEEE International Conference on Distributed Smart Cameras, ICDSC

作者： Qiao Huang Jie Yang Yu Qiao Institute of Image Processing and Pattern Recognition and Key Laboratory of System Control and Information Processing Ministry of Education of China Shanghai Jiao Tong University Shanghai China

Tracking the same person across multiple cameras is an important task in multi-camera systems. It is also desirable to re-identify the individuals who have been previously seen with a single-camera. This paper addresses this problem by the re-identification of the same individual in two different datasets, which are both challenging situations from video surveillance system. In this paper, local descriptors are introduced for image description, and support vector machines are employed for high classification performance and so an efficient Bag of Features approach for image presentation. In this way, robustness against low resolution, occlusion and pose, viewpoint and illumination changes is achieved in a very fast way. We get promising results from the evaluation with situations where a number of individuals vary continuously from a multi-camera system.

关键词： Vocabulary Cameras Histograms Feature extraction Image color analysis Support vector machine classification Kernel

来源：评论

学校读者我要写书评

暂无评论

建议与咨询留下您的常用邮箱和电话号码，以便我们向您反馈解决方案和替代方法

时间限定

文献类型

馆藏选择

核心期刊

语言

文献类型

帮助

文字说明：

检索规则说明：

检索范例：

分类表

所选分类

限定检索结果

文献类型

馆藏范围

日期分布

学科分类号

主题

机构

作者

语言

请选择保存的检索档案：

请选择收藏分类：

通借通还

建议与咨询 留下您的常用邮箱和电话号码，以便我们向您反馈解决方案和替代方法

时间限定

文献类型

馆藏选择

核心期刊

语言

文献类型

帮助

文字说明：

检索规则说明：

检索范例：

分类表

所选分类

限定检索结果

文献类型

馆藏范围

日期分布

学科分类号

主题

机构

作者

语言

请选择保存的检索档案： 新增检索档案 确定 取消

请选择收藏分类： 新增自定义分类 确定 取消

通借通还

建议与咨询留下您的常用邮箱和电话号码，以便我们向您反馈解决方案和替代方法

请选择保存的检索档案：

请选择收藏分类：