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2011 7th International Conference on computational Intelligence and Security, CIS 2011

作者： Yang, Bo School of Computer Science and Technology Key Laboratory of Symbol Computation and Knowledge Engineering of the Ministry of Education Jilin University Changchun 130012 China

ISBN: (纸本)9780769545844

Community structure is one of non-trivial topological properties ubiquitously demonstrated in real-world complex networks. Related theories and approaches are of fundamental importance for understanding the functions of networks. Previously, we have proposed a probabilistic algorithm called the NCMA to efficiently as well as effectively mine communities from real-world networks. Here, we show that the NCMA can be readily extended and applied to address a wide range of network oriented applications beyond community detection including ranking, characterizing and searching real-world networks. © 2011 IEEE.

关键词： Complex networks

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Super-resolution reconstruction from fluorescein angiogram sequences

Super-resolution reconstruction from fluorescein angiogram s...

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International Conference on Intelligent Computing, ICIC 2005

作者： Guo, Xiaoxin Xu, Zhiwen Lu, Yinan Liu, Zhanhui Pang, Yunjie Key Laboratory of Symbol Computation and Knowledge Engineering Jilin University Ministry of Education Qianjin Road 10# Changchun 130012 China

ISBN: (纸本)9783540282266

Intensity degradations are a familiar problem for fluorescein angiogram sequences. In this paper, we attempt to super-resolve a fluorescein angiogram, and to keep the high intensity pixels from degrading. To this end, we incorporate a new constraint, called intensity constraint, to Miller's regularization formulation with a smoothness constraint. Considering the specified requirement for fluorescein angiograms, we also modify the Q-th order converging algorithm for implementation purpose. In our scheme, including its formulation and implementation, super-resolution reconstruction can not only handle the traditional problems, such as blur, decimation, and noise, but also achieve an important feature, intensity preservation. The experiments show that our approach has satisfactory results in the two aspects. © Springer-Verlag Berlin Heidelberg 2005.

关键词： Image reconstruction

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Nutrition feature basis of food classification in traditional chinese medicine 7

Nutrition feature basis of food classification in traditiona...

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7th International Conference on Big Data Computing and Communications, BigCom 2021

作者： Zhao, Fucheng Han, Xiaosong Zhang, Yikun Niu, Peiyu Cheng, Jun Yi, Wan Jilin University Key Laboratory for Symbol Computation and Knowledge Engineering of National Education Ministry College of Computer Science and Technology Changchun130012 China

ISBN: (纸本)9781665442527

In TCM (Traditional Chinese Medicine) theory, the cold-and-hot property of food is considered as an important information to guide people's daily diet and keep them healthy. But the classification of this property mostly relies on experience from medical books, which lacks corresponding molecular chemistry basis and makes differentiation very difficult for ordinary people. To solve above question, in this paper, we collected 500 kinds of food and their nutrients, used ANOVA algorithm for feature selection to find out the nutrient feature that have a greater correlation with the cold and hot properties of food, and then used LightGBM algorithm to classify the processed data set. Finally, we constructed a reliable and accurate classification model and found the related nutritional elements are Tyrosine, Arginine, Thiamine, Vitamin B6 and Selenium. © 2021 IEEE.

关键词： Machine learning

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Making Simple Tabular Reduction works on negative table constraints

Making Simple Tabular Reduction works on negative table cons...

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27th AAAI Conference on Artificial Intelligence, AAAI 2013

作者： Li, Hongbo Liang, Yanchun Guo, Jinsong Li, Zhanshan Key Laboratory for Symbol Computation and Knowledge Engineering of National Education Ministry College of Computer Science and Technology Jilin University Changchun 130012 China

ISBN: (纸本)9781577356158

Simple Tabular Reduction algorithms (STR) work well to establish Generalized Arc Consistency (GAC) on positive table constraints. However, the existing STR algorithms are useless for negative table constraints. In this work, we propose a novel STR algorithm and its improvement, which work on negative table constraints. Our preliminary experiments are performed on some random instances and a certain benchmark instances. The results show that the new algorithms outperform GAC-valid and the MDD-based GAC algorithm. Copyright © 2013, Association for the Advancement of Artificial Intelligence (***). All rights reserved.

关键词： Benchmarking

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Identification of transcription factor binding sites using GA and PSO

Identification of transcription factor binding sites using G...

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6th International Conference on Intelligent Systems Design and Applications (ISDA 2006)

作者： Chang, Xiao-Yu Zhou, Chun-Guang Li, Yan-Wen Hu, Ping Key Laboratory of Symbol Computation and J Knowledge Engineering Jilin University Ministry of Education China Department of Computer Science Northeast Normal University Changchun 130012 China

ISBN: (纸本)0769525288

Identification of transcription factor binding sites from the upstream regions of genes is a highly important and unsolved problem. In this paper, we propose a novel framework for using evolutionary algorithm to solve this challenging issue. Under this framework, we use two prevalent evolutionary algorithms: Genetic, Algorithm (GA) and Particle Swarm Optimization (PSO) to find unknown sites in a collection of relatively long intergenic sequences that are suspected of being bound by the same factor. This paper represents binding sites motif to position weight matrix (PWM) and introduces how to code PWM to genome for GA and how to code it to particle for PSO. We apply these two algorithms to 5 different yeast Saccharomyces Cerevisiae transcription factor binding sites and CRP binding sites. The results on Saccharomyces Cerevisiae show that it can find the correct binding sites motifs, and the result on CRP shows that these two algorithms can achieve more accuracy than MEME and Gibbs Sampler.

关键词： Binding sites

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A Fuzzy neural network system based on generalized class cover and particle swarm optimization

A Fuzzy neural network system based on generalized class cov...

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International Conference on Intelligent Computing, ICIC 2005

作者： Huang, Yanxin Wang, Yan Zhou, Wengang Yu, Zhezhou Zhou, Chunguang College of Computer Science and Technology Jilin University Key Laboratory for Symbol Computation and Knowledge Engineering of the National Education Ministry Changchun 130012 China

A voting-mechanism-based fuzzy neural network system is proposed in this paper. When constructing the network structure, a generalized class cover problem is presented and its two solving algorithm, an improved greedy algorithm and a binary particle swarm optimization algorithm, are proposed to get the class covers with relatively even radii, which are used to partition fuzzy input space and extract fewer robust fuzzy IF-THEN rules. Meanwhile, a weighted Mamdani inference mechanism is adopted to improve the efficiency of the system output and a real-valued particle swarm optimization-based algorithm is used to refine the system parameters. Experimental results show that the system is feasible and effective. © Springer-Verlag Berlin Heidelberg 2005.

关键词： Neural networks

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PNESR-DDI: An Effective Drug-Drug Interaction Prediction Model Based on Pretraining Method and Enhanced Subgraph Reconstruction

PNESR-DDI: An Effective Drug-Drug Interaction Prediction Mod...

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2024 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2024

作者： Chen, Ke Han, Xiaosong Li, Xiaoran Liang, Yanchun Xu, Dong Guan, Renchu Jilin University Key Laboratory for Symbol Computation and Knowledge Engineering of National Education Ministry College of Software Changchun China Jilin University Key Laboratory for Symbol Computation and Knowledge Engineering of National Education Ministry College of Computer Science and Technology Changchun China Zhuhai College of Science and Technology Zhuhai Laboratory of Key Laboratory of Symbol Computation and Knowledge Engineering of Ministry of Education School of Computer Science Zhuhai China University of Missouri Christopher S. Bond Life Sciences Center Department of Electrical Engineering and Computer Science Columbia United States

ISBN: (纸本)9798350386226

Drug-Drug Interaction (DDI) task plays a crucial role in clinical treatment and drug development. Recently, deep learning methods have been successfully applied for DDI prediction. However, training deep learning models always need large amount of data, while known DDIs are scarce. To address this challenge, a graph neural network-based DDI prediction model named PNESR-DDI is proposed, which compensates for the lack of DDIs by enriching drug representations. First, to obtain initial node representations that incorporate rich semantic information from the biomedical knowledge graph (KG), a link prediction pre-training method on external KG is proposed in the node embedding pre-training module. Then, considering the large scale of the KG, subgraph extraction for the target drug pairs is introduced to reduce noise and decrease computational complexity in the subgraph anchoring module. After that, the subgraph is updated, and node similarities are propagated in the subgraph reconstruction module. Based on the node similarity scores, the subgraph is pruned and reconstructed, which adjusts node representations to be more conducive to DDI prediction. Finally, the drug embeddings, subgraph representations, and drug fingerprint features are concatenated to predict DDIs. PNESRDDI is evaluated on two benchmark DDI datasets: DrugBank and TWOSIDES. Experiment results show that PNESR-DDI achieves better performance than baselines. Ablation results validate the effectiveness of the pre-training method and the adaptive subgraph reconstruction strategy. © 2024 IEEE.

关键词： knowledge graph

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Crossed-Time Delay Neural Network for Speaker Recognition 1

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27th International Conference on MultiMedia Modeling, MMM 2021

作者： Chen, Liang Liang, Yanchun Shi, Xiaoshu Zhou, You Wu, Chunguo Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education College of Computer Science and Technology Jilin University Changchun130012 China Zhuhai Laboratory of Key Laboratory of Symbol Computation and Knowledge Engineering of Ministry of Education School of Computer Zhuhai College of Jilin University Zhuhai519041 China

ISBN: (数字)9783030678326

ISBN: (纸本)9783030678319

Time Delay Neural Network (TDNN) is a well-performing structure for deep neural network-based speaker recognition systems. In this paper we introduce a novel structure, named Crossed-Time Delay Neural Network (CTDNN) to enhance the performance of current TDNN for speaker recognition. Inspired by the multi-filters setting of convolution layers from convolution neural networks, we set multiple time delay units with different context size at the bottom layer and construct a multilayer parallel network. The proposed CTDNN gives significant improvements over original TDNN on both speaker verification and identification tasks. It outperforms in VoxCeleb1 dataset in verification experiment with a 2.6% absolute Equal Error Rate improvement. In few shots condition, CTDNN reaches 90.4% identification accuracy, which doubles the identification accuracy of original TDNN. We also compare the proposed CTDNN with another new variant of TDNN, Factorized-TDNN, which shows that our model has a 36% absolute identification accuracy improvement under few shots condition. Moreover, the proposed CTDNN can handle training with a larger batch more efficiently and hence, utilize calculation resources economically. © 2021, Springer Nature Switzerland AG.

关键词： Convolution

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Solving constrained traveling salesman problems by genetic algorithms

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自然科学进展(英文版) 2004年第7期14卷 631-637页

作者： WU Chunguo LIANG Yanchun LEE Heowpueh LU Chun LIN Wuzhong College of Computer Science and Technology Jilin University Key Laboratory for Symbol Computation and Knowledge Engineering Ministry of Education of China Changchun 130012 China Institute of High Performance Computing Singapore 117528 Singapore Institute of High Performance Computing Singapore 117528 Singapore

Three kinds of constrained traveling salesman problems (TSP) arising from application problems, namely the open route TSP, the end-fixed TSP, and the path-constrained TSP, are proposed. The corresponding approaches based on modified genetic algorithms (GA) for solving these constrained TSPs are presented. Numerical experiments demonstrate that the algorithm for the open route TSP shows its advantages when the open route is required, the algorithm for the end-fixed TSP can deal with route optimization with constraint of fixed ends effectively, and the algorithm for the path-constraint could benefit the traffic problems where some cities cannot be visited from each other.

关键词： constrained traveling salesman problem genetic algorithm Hamiltonian path open route fixed end

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Image registration based on pseudo-polar FFT and analytical fourier-mellin transform

Image registration based on pseudo-polar FFT and analytical ...

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International Conference on Intelligent Computing, ICIC 2005

作者： Guo, Xiaoxin Xu, Zhiwen Lu, Yinan Liu, Zhanhui Pang, Yunjie College of Computer Science and Technology Key Laboratory of Symbol Computation and Knowledge Engineering of the Ministry of Education Jilin University Qianjin Street 2699 Changchun 130012 China

ISBN: (纸本)9783540282266

This paper proposes a novel registration algorithm based on Pseudo-Polar Fast Fourier Transform (FFT) and Analytical Fourier-Mellin Transform (AFMT) for the alignment of images differing in translation, rotation angle, and uniform scale factor. The proposed algorithm employs the AFMT of the Fourier magnitude to determine all the geometric transformation parameters with its property of the invariance to translation and rotation. Besides, the proposed algorithm adopt a fast high accuracy conversion from Cartesian to polar coordinates based on the pseudo-polar FFT and the conversion from the pseudo-polar to the polar grid, which involves only ID interpolations, and obtain a more significant improvement in accuracy than the conventional method using cross-correlation. Experiments show that the algorithm is accurate and robust regardless of white noise. © Springer-Verlag Berlin Heidelberg 2005.

关键词： Image processing

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