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3rd Asia Conference on Algorithms, Computing and Machine Learning, CACML 2024

作者： Xu, Can Huang, Yaqin Xiang, Xinni Lei, Haike Yang, Jie Shanghai Jiao Tong University Shanghai China Chongqing University Cancer Hospital Chongqing China West China Hospital Sichuan University Chengdu China Shanghai Jiao Tong University Institute of Image Processing and Pattern Recognition China Chongqing Key Laboratory of Translational Research for Cancer Metastasis and Individualized Treatment China West China School of Medicine China Chongqing Cancer Multi-omics Big Data Application Engineering Research Center China

ISBN: (纸本)9798400716416

Machine Learning (ML) has been widely applied to medical science for decades. As common knowledge, the progress of many diseases is often chronic and dynamic. Longitudinal data, or time-series data, has better descriptions of certain diseases, as it naturally captures the dynamic over time. Venous thromboembolism (VTE), as a regular complication of cancer tumour treatments, has been emphasized in many studies. Recent research has shown that ML algorithms incredibly contribute to VTE risk estimation and prediction. However, existing methods rarely consider the dynamic changes during the development of VTE, and often make decisions based on time-point data, such as the latest blood test results of patients. In this paper, we propose a VTE detection model that takes advantage of capturing dynamic information using time-series data. The model consists of a Recurrent Neural Network (RNN) based framework with time embedding and Attention mechanism to encode longitudinal features of patients. We test our proposed model on a real-world dataset that contains multiple times of blood test results of patients together with other clinical features. The network is compared with several commonly used ML models in previous VTE studies. The results show that our model outperforms all baseline models, and achieved a state-of-art performance with 80.0% accuracy and 0.881 AUC. © 2024 ACM.

关键词： Risk assessment

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Novel Regularization Method for Reduced Biquaternion Neural Network

SSRN

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SSRN 2023年

作者： Gai, Shan Huang, Xiang School of Information Science and Engineering Yanshan University Hebei Qinhuangdao066004 China Key Laboratory of Jiangxi Province for Image Processing and Pattern Recognition Nanchang Hangkong University Jiangxi Nanchang330063 China

A reduced biquaternion neural network (RQNN) is a new type of neural network framework that has achieved significant success in machine learning. However, as the reduced biquaternion algebra system contains infinite zero divisors, the RQNN is easily trapped in a local minimum and overfitted. We propose a new regularization scheme for the RQNN to address these issues. First, we propose a new operation in the reduced biquaternion domain—the reduced biquaternion complex modulus (RQCM). Second, we analyse the algebraic properties and obtain the geometric meaning of the RQCM. Finally, we design an improved weight decay method using the RQCM. Unlike conventional weight decay methods with matrix norm constraints, the proposed method can better project the reduced biquaternion in terms of the scale and phase. Colour image classification and denoising tasks are used to demonstrate the superior performance of the RQCM over state-of-the-art weight decay methods. The source code can be found at https://***/tasteimage/Reg4RQNN . © 2023, The Authors. All rights reserved.

关键词： Complex networks

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Multi-scale Features Fusion Network for Single image Deraining 10

Multi-scale Features Fusion Network for Single Image Deraini...

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10th IEEE Joint International Information Technology and Artificial Intelligence Conference, ITAIC 2022

作者： Lai, Yanming Li, Qishen Huang, Hua Li, Qiufeng School of Information Engineering Nanchang Hangkong University Jiangxi Nanchang China School of Software Nanchang Hangkong University Jiangxi Nanchang China Key Laboratory of Jiangxi Province for Image Processing and Pattern Recognition Jiangxi Nanchang China Nanchang Hangkong University Ministry of Education Key Laboratory of Nondestructive Testing Jiangxi China

ISBN: (数字)9781665422079

ISBN: (纸本)9781665422079

Single image rain removal is an important research direction in the field of computer vision. In this paper, the Multi-scale Features Fusion Network (MFFN) is presented for rain removal. MFFN is mainly composed of Multi-features Fusion Module (MFM) and Dual Attention Module (DAM). In the MFM, we make the improved dense block and the dilation convolutions to form the feature extraction branches, which is conducive to improve the receptive fields of network. Subsequently, the bottom-up connection method is adopted between branches to help different branches make full use of image information. Then, feature branches are merged to fusion different features. DAM is consisted of purposed SA Block and standard SE Block. The purpose of DAM is to reduce the non-rain features which is extracted by the network. Experiments show that MFFN can obtain the better result of rain removal than several advanced methods. © 2022 IEEE.

关键词： Computer vision

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SliceProp: A Slice-Wise Bidirectional Propagation Model for Interactive 3D Medical image Segmentation 1

SliceProp: A Slice-Wise Bidirectional Propagation Model for ...

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1st IEEE International Conference on Medical Artificial Intelligence, MedAI 2023

作者： Xu, Xin Lu, Wenjing Lei, Jiahao Qiu, Peng Shen, Hong-Bin Yang, Yang Shanghai Jiao Tong University Key Lab. of Shanghai Education Commission for Intelligent Interaction and Cognitive Engineering Department of Computer Science and Engineering Shanghai200240 China Shanghai Ninth People's Hospital Shanghai Jiao Tong University School of Medicine Department of Vascular Surgery China Shanghai Jiao Tong University Institute of Image Processing and Pattern Recognition Key Laboratory of System Control and Information Processing Ministry of Education of China Shanghai200240 China

ISBN: (纸本)9798350358780

Interactive medical image segmentation methods have become increasingly popular in recent years. These methods combine manual labeling and automatic segmentation, reducing the workload of annotation while maintaining high accuracy. However, most current interactive segmentation frameworks are limited to 2D image data, and are not suitable for 3D image data due to the large size and high complexity of 3D data, as well as the challenges posed by information asymmetry and sparse annotation. In this paper, we propose SliceProp, an interactive segmentation framework that implements slice-wise Label Bidirectional Propagation (LBP) for 3D medical image segmentation. SliceProp extends the interactive 2D image segmentation algorithm to 3D image segmentation, and can handle 3D data with large size and high complexity. Moreover, equipped with a Backtracking Feedback Check (BFC) module, SliceProp effectively addresses the issues of information asymmetry and spatial sparse annotation in 3D medical image segmentation. Additionally, we adopt an uncertainty-based criterion to pri-oritize the slices to be refined interactively, which enhances the efficiency of the interaction process by enabling the model to focus on the regions with the most unreliable predictions. SliceProp is evaluated on two datasets and achieves promising results compared to state-of-the-art methods. © 2023 IEEE.

关键词： Medical imaging

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Cross-Modal De-Deviation for Enhancing Few-Shot Classification

SSRN

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SSRN 2023年

作者： Pan, Mei-Hong Shen, Hong-Bin School of Electronic Information and Electrical Engineering Shanghai Jiaotong University China Institute of Image Processing and Pattern Recognition Shanghai Jiao Tong University Key Laboratory of System Control and Information Processing Ministry of Education of China Shanghai200240 China

Few-shot learning poses a critical challenge due to the deviation problem caused by the scarcity of available samples. In this work, we aim to address deviations in both feature representations and prototypes. To achieve this, we propose a cross-modal de-deviation framework that leverages class semantic information to provide robust prior knowledge for the samples. This framework begins with a visual-to-semantic autoencoder trained on the labeled samples to predict semantic features for the unlabeled samples. Then, we devise a binary linear programming model to incorporate the initial prototypes with the cluster centers of the unlabeled samples. To avoid mismatch between the cluster centers and the initial prototypes, we conduct the label assignment process in the semantic space using the class ground truth semantic features as the reference points, with the cluster centers transformed into semantic representations. Moreover, we model a linear classifier with the concatenation of the refined prototypes and the class ground truth semantic features serving as the initial weights. Then we propose a novel optimization strategy based on the alternating least squares (ALS) model. From the ALS model, we can derive two closed-form solutions regarding to the features and weights, facilitating alternative optimization of them. Extensive experiments conducted on three standard benchmarks demonstrate the competitive advantages of our CMDD method over the state-of-the-art few-shot classification methods, confirming its effectiveness in reducing deviation. © 2023, The Authors. All rights reserved.

关键词： Semantics

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Isoform Function Prediction Based on Heterogeneous Graph Attention Networks

Isoform Function Prediction Based on Heterogeneous Graph Att...

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2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023

作者： Guo, Kuo Li, Yifan Chen, Hao Shen, Hong-Bin Yang, Yang Shanghai Jiao Tong University Key Lab. of Shanghai Education Commission for Intelligent Interaction and Cognitive Engineering Department of Computer Science and Engineering Shanghai200240 China Shanghai Jiao Tong University Key Laboratory of System Control and Information Processing Ministry of Education of China Institute of Image Processing and Pattern Recognition Shanghai200240 China Carnegie Mellon University School of Computer Science Computational Biology Department PittsburghPA15213 United States

ISBN: (纸本)9798350337488

Isoforms refer to different mRNA molecules transcribed from the same gene, which can be translated into proteins with varying structures and functions. Predicting the functions of isoforms is an essential topic in bioinformatics as it can provide valuable insights into the intricate mechanisms of gene regulation and biological processes. Conventionally, gene function labels are standardized in Gene Ontology (GO) terms. However, traditional methods for predicting isoform function are largely limited by the absence of isoform-specific labels, sparse annotations, and the vast number of GO terms. To address these issues, we propose HANIso, a deep learning-based method for isoform function prediction. HANIso leverages a pretrained protein language model to extract features from protein sequences. It also integrates heterogeneous information, such as isoform sequence features, GO annotations, and isoform interaction data, using a Heterogeneous Graph Attention Network (HAN). This allows the model to learn the importance of different sources of information and their semantic relationships through the attention mechanism. Our method can predict function labels at both the gene level and isoform level. We conduct experiments on two species datasets, and the results demonstrate that our method outperforms existing methods on both AUROC and AUPRC. HANIso has the potential to overcome the limitations of traditional methods and provide a more accurate and comprehensive understanding of isoform function. © 2023 IEEE.

关键词： alternative splicing gene ontology heterogeneous graph attention network isoform function prediction protein language model

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A Research Mode Based Evolutionary Algorithm for Many-Objective Optimization

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Chinese Journal of Electronics 2019年第4期28卷 764-772页

作者： CHEN Guoyu LI Junhua Key Laboratory of Jiangxi Province for Image Processing and Pattern Recognition Nanchang Hangkong University

The development of algorithms to solve Many-objective optimization problems(MaOPs) has attracted significant research interest in recent *** various types of Pareto front(PF) is a daunting challenge for evolutionary algorithm. A Research mode based evolutionary algorithm(RMEA) is proposed for many-objective optimization. The archive in the RMEA is used to store non-dominated solutions that can reflect the shape of the PF to guide the reference vector *** concerning the population is collected, once the number of non-dominated solutions reaches its limit after many generations without exceeding a given threshold, RMEA introduces a research mode that generates more reference vectors to search through the solutions. The proposed algorithm showed competitive performance with four state-of-the-art evolutionary algorithms in a large number of experiments.

关键词： Many-objective optimization Reference vector Research mode Evolutionary algorithm

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Learn What You Need in Personalized Federated Learning

arXiv

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arXiv 2024年

作者： Lv, Kexin Ye, Rui Huang, Xiaolin Yang, Jie Chen, Siheng Institute of Image Processing and Pattern Recognition Shanghai Jiao Tong University Shanghai200240 China Shanghai Jiao Tong University Shanghai200240 China Shanghai Jiao Tong University Shanghai200240 China Shanghai AI Laboratory Shanghai200232 China

Personalized federated learning aims to address data heterogeneity across local clients in federated learning. However, current methods blindly incorporate either full model parameters or predefined partial parameters in personalized federated learning. They fail to customize the collaboration manner according to each local client's data characteristics, causing unpleasant aggregation results. To address this essential issue, we propose Learn2pFed, a novel algorithm-unrolling-based personalized federated learning framework, enabling each client to adaptively select which part of its local model parameters should participate in collaborative training. The key novelty of the proposed Learn2pFed is to optimize each local model parameter's degree of participant in collaboration as learnable parameters via algorithm unrolling methods. This approach brings two benefits: 1) mathmatically determining the participation degree of local model parameters in the federated collaboration, and 2) obtaining more stable and improved solutions. Extensive experiments on various tasks, including regression, forecasting, and image classification, demonstrate that Learn2pFed significantly outperforms previous personalized federated learning methods. Copyright © 2024, The Authors. All rights reserved.

关键词： Parameter estimation

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Generating Cartoon images from Face Photos with Cycle-Consistent Adversarial Networks

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Computers, Materials & Continua 2021年第11期69卷 2733-2747页

作者： Tao Zhang Zhanjie Zhang Wenjing Jia Xiangjian He Jie Yang School of Artificial Intelligence and Computer Science Jiangnan UniversityWuxi214000China Key Laboratory of Artificial Intelligence Jiangsu214000China The Global Big Data Technologies Centre University of Technology SydneyUltimoNSW2007Australia The Institute of Image Processing and Pattern Recognition Shanghai Jiao Tong UniversityShanghai201100China

The generative adversarial network(GAN)is first proposed in 2014,and this kind of network model is machine learning systems that can learn to measure a given distribution of data,one of the most important applications is style *** transfer is a class of vision and graphics problems where the goal is to learn the mapping between an input image and an output ***-GAN is a classic GAN model,which has a wide range of scenarios in style *** its unsupervised learning characteristics,the mapping is easy to be learned between an input image and an output ***,it is difficult for CYCLE-GAN to converge and generate high-quality *** order to solve this problem,spectral normalization is introduced into each convolutional kernel of the *** convolutional kernel reaches Lipschitz stability constraint with adding spectral normalization and the value of the convolutional kernel is limited to[0,1],which promotes the training process of the proposed ***,we use pretrained model(VGG16)to control the loss of image content in the position of l1 *** avoid overfitting,l1 regularization term and l2 regularization term are both used in the object loss *** terms of Frechet Inception Distance(FID)score evaluation,our proposed model achieves outstanding performance and preserves more discriminative *** results show that the proposed model converges faster and achieves better FID scores than the state of the art.

关键词： Generative adversarial network spectral normalization Lipschitz stability constraint VGG16 l1 regularization term l2 regularization term Frechet inception distance

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Online LiDAR-Camera Extrinsic Parameters Self-checking

arXiv

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arXiv 2022年

作者： Wei, Pengjin Yan, Guohang Li, Yikang Fang, Kun Yang, Jie Liu, Wei The Institute of Image Processing and Pattern Recognition Department of Automation Shanghai Jiao Tong University China The Autonomous Driving Group Shanghai AI Laboratory China

With the development of neural networks and the increasing popularity of automatic driving, the calibration of the LiDAR and the camera has attracted more and more attention. This calibration task is multi-modal, where the rich color and texture information captured by the camera and the accurate three-dimensional spatial information from the LiDAR is incredibly significant for downstream tasks. Current research interests mainly focus on obtaining accurate calibration results through information fusion. However, they seldom analyze whether the calibrated results are correct or not, which could be of significant importance in real-world applications. For example, in large-scale production, the LiDARs and the cameras of each smart car have to get well-calibrated as the car leaves the production line, while in the rest of the car life period, the poses of the LiDARs and cameras should also get continually supervised to ensure the security. To this end, this paper proposes a self-checking algorithm to judge whether the extrinsic parameters are well-calibrated by introducing a binary classification network based on the fused information from the camera and the LiDAR. Moreover, since there is no such dataset for the task in this work, we further generate a new dataset branch from the KITTI dataset tailored for the task. Our experiments on the proposed dataset branch demonstrate the performance of our method. To the best of our knowledge, this is the first work to address the significance of continually checking the calibrated extrinsic parameters for autonomous driving. The code is open-sourced on the Github website at https://***/OpenCalib/LiDAR2camera_self-check. Copyright © 2022, The Authors. All rights reserved.

关键词： Cameras

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