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International Seminar on Research of Information Technology and Intelligent Systems (ISRITI)

作者： Jason Sebastian Sulistyawan Kuncahyo Setyo Nugroho Bens Pardamean Computer Science Department BINUS Graduate Program Master of Computer Science Bina Nusantara University Jakarta Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia

ISBN: (数字)9798331519643

ISBN: (纸本)9798331519650

Many smoking-related diseases are difficult to treat and often fatal. Rather than treating diseased smokers, preventing the diseased is more achievable, though, many of them deny to being smokers, leading to another problem. Thus, this study aims to detect important aspects that can detect that the person is a smoker or not through their bio-signals through using SHAP, along with a comprehensive analysis of the used methods, gradient-boosting algorithms XGBoost, LightGBM, and CatBoost, known for their efficiency in handling complex datasets and non-linear relationships. The study then found that triglyceride, Gtp, hemoglobins significantly affect the body's responses to smoking, based on the CatBoosts’ results, having an AUC score of up to 0.8612 and an accuracy score of up to 0.7776 with the selected features.

关键词： Seminars Measurement Accuracy Predictive models Feature extraction Boosting Physiology Classification algorithms Reliability Diseases

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A Hybrid CNN-SVM Approach for Malaria in Blood Cell Detection

A Hybrid CNN-SVM Approach for Malaria in Blood Cell Detectio...

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Software Engineering and Information Technology (ICoSEIT), International Conference on

作者： Andrea Stevens Karnyoto Mahmud Isnan Bens Pardamean Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta Indonesia

There is still a severe malaria problem worldwide, particularly in regions with limited access to diagnostic tools. It is crucial to develop a system for detecting malaria in blood cells. This paper presents a hybrid Convolutional Neural Network (CNN), and as a classifier, we use a Support Vector Machine (SVM) framework for the automated detection of malaria parasites in blood cell images. The proposed system leverages the strengths of CNNs in feature extraction and representation learning from images, combined with the discriminative power of SVMs for classification. Initially, CNN extracts intricate features from blood cell images, capturing essential patterns indicative of malaria infection. Subsequently, the extracted features are used to train an SVM classifier, enabling accurate discrimination between parasitized and uninfected blood cells. Experimental dataset evaluations were obtained from the Lister Hill National Center for Biomedical Communications website of the National Library of Medicine. The proposed model achieves a better f1-score, outperforming individual CNN or SVM models, around 0.015 compared to individual CNN models and 0.27 compared to individual SVM models. This hybrid CNN-SVM methodology offers a promising solution for accurately and efficiently detecting malaria parasites in blood cell images.

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A systematic literature review of machine learning application in COVID-19 medical image classification

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Procedia computer science 2023年 216卷 749-756页

作者： Tjeng Wawan Cenggoro Bens Pardamean Computer Science Department School of Computer Science Bina Nusantara University Jakarta 11480 Indonesia. Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta 11480 Indonesia. Computer Science Department BINUS Graduate Program - Master of Computer Science Program Bina Nusantara University Jakarta 11480 Indonesia.

Detecting COVID-19 as early as possible and quickly is one way to stop the spread of COVID-19. Machine learning development can help to diagnose COVID-19 more quickly and accurately. This report aims to find out how far research has progressed and what lessons can be learned for future research in this sector. By filtering titles, abstracts, and content in the Google Scholar database, this literature review was able to find 19 related papers to answer two research questions, i.e. what medical images are commonly used for COVID-19 classification and what are the methods for COVID-19 classification. According to the findings, chest X-ray were the most commonly used data to categorize COVID-19 and transfer learning techniques were the method used in this study. Researchers also concluded that lung segmentation and use of multimodal data could improve performance.

关键词： COVID-19 classification disease machine learning medical images

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Leveraging ChemBERTa Robustness in Drug-Drug Interaction Classification via Molecular Decomposition

Leveraging ChemBERTa Robustness in Drug-Drug Interaction Cla...

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International Seminar on Research of Information Technology and Intelligent Systems (ISRITI)

作者： Christian Kenneth Alyssa Imani Bens Pardamean Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia Computer Science Department BINUS Graduate Program – Master of Computer Science Bina Nusantara University Jakarta Indonesia

ISBN: (数字)9798331519643

ISBN: (纸本)9798331519650

Understanding drug-drug interactions (DDIs) can benefit us by enhancing drug effectiveness and preventing side effects that arise from consuming multiple drugs administered together. However, as the number of novel drugs increases, predicting potential DDIs becomes more challenging. Previous studies have used the molecular language model ChemBERTa to predict potential DDIs, but the predictions were only tested on unseen drugs and not dissimilar drugs, while also performing poorly. In this study, we demonstrate that a simple molecular preprocessing method using BRICS decomposition can enhance ChemBERTa robustness in predicting potential DDIs for unseen-dissimilar drugs. Specifically, we employ fragmentation with a minimum fragment size of 5 (BRICS-5), which balances the number of fragments and decomposition speed. Using this method, we were able to improve ChemBERTa robustness, reflected by an approximate increase of 1.5% in recall and 2.2% in the f1-score compared to non-decomposed molecules. Our findings suggest that this preprocessing method could be useful in the development of future AI-based approaches for solving challenging molecular tasks across different settings and various model architectures.

关键词： Drugs Seminars Accuracy Data preprocessing Predictive models Robustness Data models Intelligent systems Information technology

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Mitigating Berkson's Paradox with Neural Propensity Score Matching in E-Commerce Deals

Mitigating Berkson's Paradox with Neural Propensity Score Ma...

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International Conference on Cybernetics and Intelligent System (ICORIS)

作者： Nicholas Dominic Bens Pardamean Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia Computer Science Department BINUS Graduate Program – Master of Computer Science Bina Nusantara University Jakarta Indonesia

ISBN: (数字)9798331539603

ISBN: (纸本)9798331539610

Within observational Data science workloads, Berkson's paradox can lead to false causal inferences. One of the prominent quasi-experimental methods to mitigate this selection bias is Propensity Score Matching (PSM). An approach called Neural PSM (NPSM) was developed to overcome the drawbacks of conventional regression-based PSM, including its limited flexibility to model high-dimensional data and non-linear relationships that could cause imperfect covariate balance. In this study, a three-layer depth of Deep Neural Networks was designed to estimate propensity scores and finally balance both control and treatment groups of the Groupon dataset. An unsupervised k-Nearest Neighbor algorithm then helped the model to efficiently detect and cluster similar matching points. From the five salient features presented, NPSM successfully achieved lower differences in Cohen's d effect size, i.e., 0.313 for coupon duration, 0.017 for promotion length, 0.425 for quantity sold, -0.199 for limited supply, and 0.395 for Facebook likes. While these results mostly outperformed Linear Regression (LR) and Random Forest (RF) models, further evaluation is needed to verify the true effectiveness of NPSM in mitigating Berkson's paradox in broader e-commerce contexts.

关键词： Radio frequency Social networking (online) High dimensional data Linear regression Nearest neighbor methods Data science Electronic commerce Intelligent systems Cybernetics Context modeling

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Implementation of Fine-Tuned BERT for Enzyme Classification Based on Gene Ontology

Implementation of Fine-Tuned BERT for Enzyme Classification ...

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International Conference of Advanced Informatics: Concept, Theory and Application (ICAICTA)

作者： Matthew Martianus Henry Christian Kenneth Bens Pardamean Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta Indonesia

ISBN: (数字)9798331520311

ISBN: (纸本)9798331520328

Enzymes are biocatalysts with vital roles in biological functions and many industrial applications. Diverse enzymes are classified using Enzyme Commission (EC) nomenclature, making differentiation challenging. On the other hand, another biological information, gene ontology (GO), can describe the biological aspects of enzymes, covering related biological processes (BP), molecular functions (MF), and their locations within cells (CC). This study proposes a novel EC class and subclass classification of enzymes within the ontology subclass based on their GO semantics using a Bidirectional Encoder Representation of Transformer (BERT). The BERT model is first fine-tuned using the preprocessed GO term name and definition, with the enzymes in each ontology class (BP, MF, or CC) are also divided based on how the GO assigned, either through manual annotation (NONIEA) or electronically inferred (IEA). BERT successfully obtained 0.93, 0.60, 0.99, 0.90, 0.40, and 0.35 F1 scores during fine-tuning for BP IEA, BP NONIEA, MF IEA, MF NONIEA, CC IEA, and CC NONIEA, respectively. On the test set, the fine-tuned BERT significantly outperformed GOntoSim, a framework to calculate semantic similarity based on classical information theory, in EC class classification across all metrics with less inference time in all ontology subclass. Expanded further to the EC subclass, BERT can classify the enzyme on the EC subclass level in BP IEA and MF IEA ontology subclass. However, longer epochs are needed in fine-tuning. This result shows that the names and definitions of GO terms are distinguishable features in classifying enzymes as an alternative to the information content approach.

关键词： Measurement Enzymes Semantics Bidirectional control Manuals Ontologies Transformers Encoding Biological information theory Informatics

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Sentiment Analysis of Electric Vehicle Incentives Using CNN-LSTM and SVM Models

Sentiment Analysis of Electric Vehicle Incentives Using CNN-...

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International Conference on Informatics and Computing (ICIC)

作者： Fahmi Reza Prasastio P Dimas Riswanda Pradana Endra Permana Afiahayati Aufaclav Zatu Kusuma Frisky Department Computer Science And Electronics Master Program in Artificial Intelligence Universitas Gadjah Mada Yogyakarta Indonesia Department Computer Science And Electronics Universitas Gadjah Mada Yogyakarta Indonesia

ISBN: (数字)9798331517601

ISBN: (纸本)9798331517618

In this study, we will briefly discuss the potential use of a hybrid deep learning model consisting of Convolutional Neural Networks (CNNs) and Long Short-Term Memory (LSTMs) in sentiment analysis applications will be briefly outlined. This hybrid deep learning CNN-LSTM model will be compared with several machine learning-based models across various evaluations. The research is conducted using a dataset containing sentiments expressed by the Indonesian public regarding the government’s policy of “incentives for purchasing electric cars” sourced from YouTube. Based on the conducted research, it has been discovered that the combination of CNN and LSTM model provides competitive results compared to several other machine learning models.

关键词： Deep learning Support vector machines Sentiment analysis Analytical models Video on demand Data models Convolutional neural networks Web sites Informatics Long short term memory

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Monitoring Applications for Vehicle based on Internet of Things (IoT) using the MQTT Protocol 8

Monitoring Applications for Vehicle based on Internet of Thi...

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8th International Conference on computer science and Computational Intelligence, ICCSCI 2023

作者： Nurudin Sukmandhani, Arief Agus Zarlis, Muhammad Computer Science Department BinusOnline Learning Bina Nusantara University Jakarta11480 Indonesia Information Systems Management Department BINUS Graduate Program - Master of Information Systems Management Bina Nusantara University Jakarta11480 Indonesia

Monitoring of vehicle conditions is needed as one of the securities in driving because one of the accident rates is negligence in checking the condition of the vehicle. This study aims to help reduce the level of accidents and increase human awareness for vehicle conditions, especially minibus type vehicles. The system works to provide information on the condition of vehicles sourced from the Engine Control Unit (ECU). ECU data cars are obtained by SNIP traffic broadcast message and ask for data directly at the ECU. The car can provide vehicle information using a Canbus communication protocol through the OBD-II socket. Vehicle information can be seen by users through the website in real time. Based on the evaluation from the user side, this system provides ease of monitoring vehicle conditions because it can be accessed via the internet using various kinds of devices. © 2023 The Authors. Published by Elsevier B.V.

关键词： Blackbox ECU OBD-II Sstem Logging

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Objective Sleep Quality Measurement based on Fuzzy Logic and Wearable Device

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Procedia computer science 2023年 227卷 1153-1162页

作者： Jason A. Wijaya Pauw D. Andersen Nico Surantha Computer Science Department BINUS Graduate Program – Master of Computer Science Bina Nusantara University Jakarta 11480 Indonesia Department of Electrical Electronic and Communication Engineering Tokyo City University Japan

Sleep is the natural state of relaxation for human being. Sleep quality is an essential yet frequently neglected aspect of sleep in general. Sleep quality is essential because it allows the body to restore itself and prepare for the next day. The standard method for evaluating sleep quality was subjective evaluation. Actigraphy devices, which can measure the sleep cycle, are now widely available. This study developed a method using Fuzzy Logic and an actigraphy device to measure and classify sleep quality. The fuzzy logic method was developed in several stages, which are determining the sleep quality measurement parameters, constructing the fuzzy set for each input variable, and developing the fuzzy rules. To evaluate the proposed fuzzy model, five individuals were invited to participate in the experiment and required to complete the PSQI subjective sleep questionnaire. The evaluation result shows that our proposed Fuzzy model achieves lower error compared to the existing method.

关键词： sleep sleep quality actigraphy artificial intelligences fuzzy logic

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An Environmentally Friendly Fishing Android-Based Mobile Device App for Penghu Islands (Pescadores), Taiwan

An Environmentally Friendly Fishing Android-Based Mobile Dev...

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Consumer Technology (ICCT-Pacific), International Conference on

作者： Hung-Tu Lin Ke-Qing Yan Ying-Zun Fang Xiang-Rui Huang Liang-Bi Chen Department of Computer Science and Information Engineering National Penghu University of Science and Technology Penghu Taiwan Department of Electrical Engineering Master Program in Electrical Engineering and Computer Science National Penghu University of Science and Technology Penghu Taiwan

ISBN: (数字)9798331504120

ISBN: (纸本)9798331504137

Penghu Islands (Pescadores), Taiwan's outlying islands surrounded by the sea, boast rich fishing resources that attract many anglers. However, successful fishing requires more than just gear: it involves understanding the varying fish species available in different locations, times, and climates, as well as adhering to relevant laws and regulations. To address these needs, this paper proposes an environmentally friendly fishing Android-based mobile device App specifically for the Penghu Islands. The proposed Android-based mobile device App aims to gather essential information, including local fishing regulations, aquatic safety tips, and important precautions. Its goal is to equip fishermen with the resources necessary to fish successfully and with peace of mind.

关键词： Sea measurements Length measurement Fish Regulation Mobile applications Tides Protection Smart phones Meteorology Lenses

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