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SYNAPSE: An international roadmap to large brain imaging

Physics Reports 2023年第1期999卷 1-60页

作者： Stampfl, Anton P.J. Liu, Zhongdong Hu, Jun Sawada, Kei Takano, H. Kohmura, Yoshiki Ishikawa, Tetsuya Lim, Jae-Hong Je, Jung-Ho Low, Chian-Ming Teo, Alvin Tok, Eng Soon Tan, Tin Wee Ban, Kenneth Libedinsky, Camilo Tan, Francis Chee Kuan Chen, Kuan-Peng Yang, An-Cheng Chuang, Chao-Chun Chen, Nan-Yow Shih, Chi-Tin Lee, Ting-Kuo Yang, De-Nian Lai, Hsu-Chao Shuai, Hong-Han Cheng, Chang-Chieh Ching, Yu-Tai Li, Chia-Wei Charng, Ching-Che Lo, Chung-Chuan Chiang, Ann-Shyn Recur, Benoit Petibois, Cyril Cheng, Chia-Liang Chen, Hsiang-Hsin Yang, Shun-Min Hwu, Yeukuang Rojviriya, Catleya Rugmai, Supagorn Rujirawat, Saroj Margaritondo, Giorgio Australian Nuclear Science and Technology Organization Lucas Heights 2234 NSW Australia Henan university of Technology Zhengzhou China Shanghai Institute of Applied Physics Chinese Academy of Science Shanghai China RIKEN SPring-8 Center Hyogo 679-5148 Japan Pohang Accelerator Laboratory Pohang University of Science and Technology Pohang Gyeongbuk 37673 South Korea Department of Materials Science and Engineering Pohang University of Science and Technology Gyeongbuk Pohang 37673 South Korea Department of Pharmacology Department of Anaesthesia and Healthy Longevity Research Programme Yong Loo Lin School of Medicine National University of Singapore Singapore School of Chemical and Life Sciences Nanyang Polytechnic Singapore eMaGIC-Lab Department of Physics National University of Singapore Singapore National Supercomputing Center Singapore Department of Psychology The N1 Institute for Health National University of Singapore Singapore Institute of Molecular and Cell Biology A*STAR Singapore Department of Anaesthesia National University Hospital National University Health System Singapore National Center for High-Performance Computing Hsinchu Taiwan Department of Physics Tunghai University Taichung Taiwan Department of Physics National Tsing Hua University Hsinchu Taiwan Institute of Information Science Academia Sinica Taipei Taiwan Department of Computer Science National Yang Ming Chiao Tung University Hsinchu Taiwan Department of Electronics and Electrical Engineering National Yang Ming Chiao Tung University Hsinchu Taiwan Information Technology Service Center National Yang Ming Chiao Tung University Hsinchu Taiwan National Yang Ming Chiao Tung University Hsinchu Taiwan Department of Life Science National Tsing Hua University Hsinchu Taiwan Institute of Systems Neuroscience and Brain Research Center National Tsing Hua University Hsinchu Taiwan Institute of Physics Academia Sinica Taipei Taiwan Department of Physics National Dong Hwa University

Since 2020, synchrotron radiation facilities in several Asia-Pacific countries have been collaborating in a major project called “SYNAPSE” (Synchrotrons for Neuroscience: an Asia-Pacific Scientific Enterprise). They use x-ray imaging to attack in a coordinated fashion one of the major issues in modern science: the structure of animal and human brains, including neurons and connections. The objective is to develop Google-like maps also including detailed structural and functional information for selected regions of interest. The sheer mass of data needed for the objective poses huge problems for the acquisition, processing, storage and use of images. In order to complete the task within a reasonable time, the key element of the SYNAPSE strategy is the parallel and coordinated work of several facilities on the same specimens. This article reviews different aspects of the enterprise, including the foundations of synchrotron radiation, coherence and of its role in advanced imaging, electron accelerators, x-ray optics and detectors. This will provide the foundation for an extensive presentation of the different components of SYNAPSE, with an overview of results already obtained within the consortium. © 2022

关键词： Brain mapping Phase contrast Radiology Supercomputing Synchrotron X-rays

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Simultaneously Transmitting and Reflecting Reconfigurable Intelligent Surface Assisted NOMA Networks

arXiv

引用

arXiv 2021年

作者： Yue, Xinwei Xie, Jin Liu, Yuanwei Han, Zhihao Liu, Rongke Ding, Zhiguo The Key Laboratory of Information and Communication Systems Ministry of Information Industry China The Key Laboratory of Modern Measurement & Control Technology Ministry of Education Beijing Information Science and Technology University Beijing100101 China The School of Electronic Engineering and Computer Science Queen Mary University of London LondonE1 4NS United Kingdom The School of Electronic and Information Engineering Beihang University Beijing100191 China The Department of Electrical Engineering Princeton University Princeton United States The School of Electrical and Electronic Engineering The University of Manchester Manchester United Kingdom

Simultaneously transmitting/refracting and reflecting reconfigurable intelligent surface (STAR-RIS) has been introduced to achieve full coverage area. This paper investigate the performance of STAR-RIS assisted non-orthogonal multiple access (NOMA) networks over Rician fading channels, where the incidence signals sent by base station are reflected and transmitted to the nearby user and distant user, respectively. To evaluate the performance of STAR-RIS-NOMA networks, we derive new approximate expressions of outage probability and ergodic rate for a pair of users, in which the imperfect successive interference cancellation (ipSIC) and perfect SIC (pSIC) schemes are taken into consideration. Based on the asymptotic expressions, the diversity orders of the nearby user with ipSIC/pSIC and distant user are achieved carefully. The high signal-to-noise ratio slopes of ergodic rates for nearby user with pSIC and distant user are equal to one and zero, respectively. In addition, the system throughput of STAR-RIS-NOMA is discussed in delay-limited and delay-tolerant modes. Simulation results are provided to verify the accuracy of the theoretical analyses and demonstrate that: 1) The outage probability of STAR-RIS-NOMA outperforms that of STAR-RIS assisted orthogonal multiple access (OMA) and conventional cooperative communication systems;2) With the increasing of reflecting elements K and Rician factor κ, the STAR-RIS-NOMA networks are capable of attaining the enhanced performance;and 3) The ergodic rates of STAR-RIS-NOMA are superior to that of STAR-RIS-OMA. Copyright © 2021, The Authors. All rights reserved.

关键词： Signal to noise ratio

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Predicting extreme events from data using deep machine learning: when and where

arXiv

引用

arXiv 2022年

作者： Jiang, Junjie Huang, Zi-Gang Grebogi, Celso Lai, Ying-Cheng The Key Laboratory of Biomedical Information Engineering of Ministry of Education Institute of Health and Rehabilitation Science School of Life Science and Technology Research Center for Brain-inspired Intelligence Xi’an Jiaotong University The Key Laboratory of Neuro-informatics & Rehabilitation Engineering of Ministry of Civil Affairs Shaanxi Xi’an China School of Electrical Computer and Energy Engineering Arizona State University TempeAZ85287 United States Institute for Complex Systems and Mathematical Biology School of Natural and Computing Sciences King’s College University of Aberdeen AB24 3UE United Kingdom Department of Physics Arizona State University TempeAZ85287 United States

We develop a deep convolutional neural network (DCNN) based framework for model-free prediction of the occurrence of extreme events both in time ("when") and in space ("where") in nonlinear physical systems of spatial dimension two. The measurements or data are a set of two-dimensional snapshots or images. For a desired time horizon of prediction, a proper labeling scheme can be designated to enable successful training of the DCNN and subsequent prediction of extreme events in time. Given that an extreme event has been predicted to occur within the time horizon, a space-based labeling scheme can be applied to predict, within certain resolution, the location at which the event will occur. We use synthetic data from the 2D complex Ginzburg-Landau equation and empirical wind speed data of the North Atlantic ocean to demonstrate and validate our machine-learning based prediction framework. The trade-offs among the prediction horizon, spatial resolution, and accuracy are illustrated, and the detrimental effect of spatially biased occurrence of extreme event on prediction accuracy is discussed. The deep learning framework is viable for predicting extreme events in the real world. © 2022, CC BY.

关键词： Forecasting

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JARVIS-Leaderboard: A Large Scale Benchmark of Materials Design Methods

arXiv

引用

arXiv 2023年

作者： Choudhary, Kamal Wines, Daniel Garrity, Kevin F. Williams, Maureen Tavazza, Francesca Li, Kangming Hattrick-Simpers, Jason Gupta, Vishu Romero, Aldo H. Krogel, Jaron T. Saritas, Kayahan Fuhr, Addis Ganesh, Panchapakesan Kent, Paul R.C. Yan, Keqiang Lin, Yuchao Ji, Shuiwang Blaiszik, Ben Reiser, Patrick Friederich, Pascal Agrawal, Ankit Tiwary, Pratyush Beyerle, Eric Minch, Peter Rhone, Trevor David Takeuchi, Ichiro Wexler, Robert B. Mannodi-Kanakkithodi, Arun Ertekin, Elif Mishra, Avanish Mathew, Nithin Wood, Mitchell Rohskopf, Andrew Dale Wang, Shih-Han Achenie, Luke E.K. Xin, Hongliang Biacchi, Adam J. Material Measurement Laboratory National Institute of Standards and Technology MD20899 United States Department of Materials Science and Engineering University of Toronto 27 King’s College Cir TorontoON Canada Department of Electrical and Computer Engineering Northwestern University EvanstonIL60208 United States Lewis-Sigler Institute for Integrative Genomics Princeton University PrincetonNJ08544 United States Ludwig Institute for Cancer Research Princeton University PrincetonNJ08544 United States Department of Physics and Astronomy West Virginia University MorgantownWV26506 United States Materials Science and Technology Division Oak Ridge National Laboratory Oak RidgeTN37831 United States Center for Nanophase Materials Science Oak Ridge National Laboratory Oak RidgeTN37831 United States Computational Sciences and Engineering Division Oak Ridge National Laboratory Oak RidgeTN37831 United States Department of Computer Science and Engineering Texas A&M University College StationTX77843 United States Globus University of Chicago IL60637 United States Data Science Learning Division National Lab ArgonneIL60439 United States Institute of Nanotechnology Karlsruhe Institute of Technology Kaiserstraße 12 Karlsruhe76131 Germany Institute of Theoretical Informatics Karlsruhe Institute of Technology Kaiserstraße 12 Karlsruhe76131 Germany Department of Chemistry and Biochemistry Institute for Physical Science and Technology University of Maryland College ParkMD20742 United States Department of Physics Applied Physics and Astronomy Rensselaer Polytechnic Institute TroyNY12180 United States Department of Materials Science and Engineering University of Maryland College ParkMD20742 United States Department of Chemistry Institute of Materials Science and Engineering Washington University in St. Louis St. LouisMO63130 United States School of Materials Engineering Purdue University West LafayetteIN47907 United States Department of Mechan

Lack of rigorous reproducibility and validation are significant hurdles for scientific development across many fields. Materials science, in particular, encompasses a variety of experimental and theoretical approaches that require careful benchmarking. Leaderboard efforts have been developed previously to mitigate these issues. However, a comprehensive comparison and benchmarking on an integrated platform with multiple data modalities with perfect and defect materials data is still lacking. This work introduces JARVIS-Leaderboard, an open-source and community-driven platform that facilitates benchmarking and enhances reproducibility. The platform allows users to set up benchmarks with custom tasks and enables contributions in the form of dataset, code, and meta-data submissions. We cover the following materials design categories: Artificial Intelligence (AI), Electronic Structure (ES), Force-fields (FF), Quantum Computation (QC) and Experiments (EXP). For AI, we cover several types of input data, including atomic structures, atomistic images, spectra, and text. For ES, we consider multiple ES approaches, software packages, pseudopotentials, materials, and properties, comparing results to experiment. For FF, we compare multiple approaches for material property predictions. For QC, we benchmark Hamiltonian simulations using various quantum algorithms and circuits. Finally, for experiments, we use the inter-laboratory approach to establish benchmarks. There are 1281 contributions to 274 benchmarks using 152 methods with more than 8 million data-points, and the leaderboard is continuously expanding. The JARVIS-Leaderboard is available at the website: https://***/jarvis_leaderboard/ © 2023, CC BY.

关键词： Electronic structure

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Vector Symbolic Architectures as a computing Framework for Emerging Hardware

arXiv

引用

arXiv 2021年

作者： Kleyko, Denis Davies, Mike Frady, E. Paxon Kanerva, Pentti Kent, Spencer J. Olshausen, Bruno A. Osipov, Evgeny Rabaey, Jan M. Rachkovskij, Dmitri A. Rahimi, Abbas Sommer, Friedrich T. The Redwood Center for Theoretical Neuroscience The University of California BerkeleyCA94720 United States The Intelligent Systems Lab Research Institutes of Sweden Kista16440 Sweden The Neuromorphic Computing Laboratory Intel Labs Santa ClaraCA95054 United States The Department of Computer Science Electrical and Space Engineering Luleå University of Technology Luleå97187 Sweden The Department of Electrical Engineering and Computer Sciences The University of California BerkeleyCA94720 United States International Research and Training Center for Information Technologies and Systems Kyiv03680 Ukraine IBM Research – Zurich Rüschlikon8803 Switzerland

This article reviews recent progress in the development of the computing framework Vector Symbolic Architectures (also known as Hyperdimensional computing). This framework is well suited for implementation in stochastic, emerging hardware and it naturally expresses the types of cognitive operations required for Artificial Intelligence (AI). We demonstrate in this article that the field-like algebraic structure of Vector Symbolic Architectures offers simple but powerful operations on high-dimensional vectors that can support all data structures and manipulations relevant to modern computing. In addition, we illustrate the distinguishing feature of Vector Symbolic Architectures, "computing in superposition," which sets it apart from conventional computing. It also opens the door to efficient solutions to the difficult combinatorial search problems inherent in AI applications. We sketch ways of demonstrating that Vector Symbolic Architectures are computationally universal. We see them acting as a framework for computing with distributed representations that can play a role of an abstraction layer for emerging computing hardware. This article serves as a reference for computer architects by illustrating the philosophy behind Vector Symbolic Architectures, techniques of distributed computing with them, and their relevance to emerging computing hardware, such as neuromorphic computing. Copyright © 2021, The Authors. All rights reserved.

关键词： Vectors

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Post-quantum cryptographic hardware primitives

arXiv

引用

arXiv 2019年

作者： Bu, Lake Agrawal, Rashmi Cheng, Hai Kinsy, Michel A. Adaptive and Secure Computing Systems Laboratory Department of Electrical and Computer Engineering Boston University

The development and implementation of post-quantum cryptosystems have become a pressing issue in the design of secure computing systems, as general quantum computers have become more feasible in the last two years. In this work, we introduce a set of hardware post-quantum cryptographic primitives (PCPs) consisting of four frequently used security components, i.e., public-key cryptosystem (PKC), key exchange (KEX), oblivious transfer (OT), and zero-knowledge proof (ZKP). In addition, we design a high speed polynomial multiplier to accelerate these primitives. These primitives will aid researchers and designers in constructing quantum-proof secure computing systems in the post-quantum era. Copyright © 2019, The Authors. All rights reserved.

关键词： Field programmable gate arrays (FPGA)

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A lightweight mceliece cryptosystem co-processor design

arXiv

引用

arXiv 2019年

作者： Bu, Lake Agrawal, Rashmi Cheng, Hai Kinsy, Michel A. Adaptive and Secure Computing Systems Laboratory Department of Electrical and Computer Engineering Boston University

Due to the rapid advances in the development of quantum computers and their susceptibility to errors, there is a renewed interest in error correction algorithms. In particular, error correcting code-based cryptosystems have reemerged as a highly desirable coding technique. This is due to the fact that most classical asymmetric cryptosystems will fail in the quantum computing era. Quantum computers can solve many of the integer factorization and discrete logarithm problems efficiently. However, code-based cryptosystems are still secure against quantum computers, since the decoding of linear codes remains as NP-hard even on these computing systems. One such cryptosystem is the McEliece code-based cryptosystem. The original McEliece code-based cryptosystem uses binary Goppa code, which is known for its good code rate and error correction capability. However, its key generation and decoding procedures have a high computation complexity. In this work we propose a design and hardware implementation of an public-key encryption and decryption co-processor based on a new variant of McEliece system. This co-processor takes the advantage of the non-binary Orthogonal Latin Square Codes to achieve much smaller computation complexity, hardware cost, and the key size. Copyright © 2019, The Authors. All rights reserved.

关键词： Integrated circuit design

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Spatial Multiplexing with Limited RF Chains: Generalized Beamspace Modulation (GBM) for mmWave Massive MIMO

Spatial Multiplexing with Limited RF Chains: Generalized Bea...

引用

作者： Gao, Shijian Cheng, Xiang Yang, Liuqing Department of Electrical and Computer Engineering Colorado State University Fort CollinsCO United States Department of Electronics State Key Laboratory of Advanced Optical Communication Systems and Networks School of Electronics Engineering and Computing Sciences Peking University Beijing China

Millimeter wave (mmWave) massive multiple-input multiple-output (mMIMO) has been recognized as a promising candidate for 5G communications for its capability of supporting Gb/s transmission. However, it is a common exercise to deploy a limited number of radio-frequency (RF) chains at mmWave mMIMO transceivers due to hardware complexity and cost. As a result, the potential multiplexing gain (MG), which is restricted by the smaller number of RF chains at the transmitter and receiver, is markedly compromised. In order to boost the MG and spectral efficiency (SE), we innovatively develop a novel index modulation termed as the generalized beamspace modulation (GBM). The acquisition of (sub-)beamspace is owing to a natural exploitation of the unique features of mmWave mMIMO. Based on the (sub-)beamspace, a complete GBM transceiver is designed and optimized. Unlike existing alternatives that are largely digital based, our GBM is tailored for the hybrid structure of mmWave mMIMO and can, thereby, realize efficient spatial multiplexing despite the limited RF chains. Extensive analyses and simulations have demonstrated remarkable superiority of GBM over existing counterparts in terms of the error performance and SE. © 1983-2012 IEEE.

关键词： Modulation

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Lightweight Task-Oriented Semantic Communication Empowered by Large-Scale AI Models

引用

IEEE Transactions on Vehicular Technology 2025年

作者： Liu, Chuanhong Guo, Caili Yang, Yang Chen, Mingzhe Quek, Tony Q. S. Beijing University of Posts and Telecommunications Beijing Key Laboratory of Network System Architecture and Convergence School of Information and Communication Engineering Beijing100876 China Beijing University of Posts and Telecommunications Beijing Laboratory of Advanced Information Networks School of Information and Communication Engineering Beijing100876 China University of Miami Department of Electrical and Computer Engineering Institute for Data Science and Computing Coral GablesFL United States Singapore University of Technology and Design Dept. of Information Systems Technology and Design 487372 Singapore

Recent studies have focused on leveraging large-scale artificial intelligence (LAI) models to improve semantic representation and compression capabilities. However, the substantial computational demands of LAI models pose significant challenges for real-time communication scenarios. To address this, this paper proposes utilizing knowledge distillation (KD) techniques to extract and condense knowledge from LAI models, effectively reducing model complexity and computation latency. Nevertheless, the inherent complexity of LAI models leads to prolonged inference times during distillation, while their lack of channel awareness compromises the distillation performance. These limitations make standard KD methods unsuitable for task-oriented semantic communication scenarios. To address these issues, we propose a fast distillation method featuring a pre-stored compression mechanism that eliminates the need for repetitive inference, significantly improving efficiency. Furthermore, a channel adaptive module is incorporated to dynamically adjust the transmitted semantic information based on varying channel conditions, enhancing communication reliability and adaptability. In addition, an information bottleneck-based loss function is derived to guide the fast distillation process. Simulation results verify that the proposed scheme outperform baselines in term of task accuracy, model size, computation latency, and training data requirements. © 1967-2012 IEEE.

关键词： NP-hard

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An IoT Edge computing System Architecture and its Application

An IoT Edge Computing System Architecture and its Applicatio...

引用

2020 IEEE International Conference on Networking, Sensing and Control, ICNSC 2020

作者： Chen, Shichao Li, Qijie Zhang, Hua Zhu, Fenghua Xiong, Gang Tang, Ying Macau University of Science and Technology State Key Laboratory for Management and Control of Complex Systems Institute of Automation Chinese Academy of Sciences China Beijing University of Technology State Key Laboratory for Management and Control of Complex Systems Institute of Automation Chinese Academy of Sciences Beijing China Beijing Aerospace Smart Manufacturing Technology Development Co. Ltd Platform Research and Development Department Beijing China State Key Laboratory for Management and Control of Complex Systems Institute of Automation Chinese Academy of Sciences Beijing China Engineering Research Center of Intelligent Systems and Technology Institute of Automation Cloud Computing Center Chinese Academy of Sciences Beijing China Rowan University Department of Electrical and Computer Engineering GlassboroNJ United States Institute of Smart Education Qingdao Academy of Intelligent Industries Qingdao China

ISBN: (纸本)9781728168531

As the number of devices connected to the Internet of things (IoT) surges, the amount of data explodes. Therefore it not only increases the bandwidth load of data transmission but also aggravates the computing and storage load of a cloud platform. At the same time, the traditional computing paradigm centered on cloud computing cannot meet the real-time requirements in many application scenarios. The emergence of edge computing can solve the problems of realtime data processing and network bandwidth occupation in the current IoT scene. In this paper, according to the characteristics of IoT, such as fragmented data, heterogeneous network, and limited energy consumption, the architecture of an IoT edge computing system is constructed to suit better an IoT scene. In addition, the application of edge computing key technologies such as virtualization, edge intelligence, computing offload, collaborative scheduling and micro-services in resource-constrained IoT scenarios is analyzed in detail. Finally, the functions and application of energy consumption monitoring and optimization to a central air-conditioning system are analyzed and summarized, which is a typical application of edge computing in the context of the IoT. © 2020 IEEE.

关键词： Edge computing

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