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International Conference on data Science and Advanced analytics (DSAA)

作者： Bo Dao Thin Nguyen Svetha Venkatesh Dinh Phung Centre for Pattern Recognition and Data Analytics (PRaDA) Deakin University Australia

The circadian system regulates 24 hour rhythms in biological creatures. It impacts mood regulation. The disruptions of circadian rhythms cause destabilization in individuals with affective disorders, such as depression and bipolar disorders. Previous work has examined the role of the circadian system on effects of light interactions on mood-related systems, the effects of light manipulation on brain, the impact of chronic stress on rhythms. However, such studies have been conducted in small, preselected populations. The deluge of data is now changing the landscape of research practice. The unprecedented growth of social media data allows one to study individual behavior across large and diverse populations. In particular, individuals with affective disorders from online communities have not been examined rigorously. In this paper, we aim to use social media as a sensor to identify circadian patterns for individuals with affective disorders in online *** use a large scale study cohort of data collecting from online affective disorder communities. We analyze changes in hourly, daily, weekly and seasonal affect of these clinical groups in contrast with control groups of general communities. By comparing the behaviors between the clinical groups and the control groups, our findings show that individuals with affective disorders show a significant distinction in their circadian rhythms across the online activity. The results shed light on the potential of using social media for identifying diurnal individual variation in affective state, providing key indicators and risk factors for noninvasive wellbeing monitoring and prediction.

关键词： Communities Mood Circadian rhythm Media Blogs Positron emission tomography Pragmatics

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Individualized arrhythmia detection with ECG signals from wearable devices

Individualized arrhythmia detection with ECG signals from we...

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International Conference on data Science and Advanced analytics (DSAA)

作者： Thanh-Binh Nguyen Wei Lou Terry Caelli Svetha Venkatesh Dinh Phung Centre for Pattern Recognition and Data Analytics Deakin University National ICT Australia

Low cost pervasive electrocardiogram (ECG) monitors is changing how sinus arrhythmia are diagnosed among patients with mild symptoms. With the large amount of data generated from long-term monitoring, come new data science and analytical challenges. Although traditional rule-based detection algorithms still work on relatively short clinical quality ECG, they are not optimal for pervasive signals collected from wearable devices-they don't adapt to individual difference and assume accurate identification of ECG fiducial points. To overcome these short-comings of the rule-based methods, this paper introduces an arrhythmia detection approach for low quality pervasive ECG signals. To achieve the robustness needed, two techniques were applied. First, a set of ECG features with minimal reliance on fiducial point identification were selected. Next, the features were normalized using robust statistics to factors out baseline individual differences and clinically irrelevant temporal drift that is common in pervasive ECG. The proposed method was evaluated using pervasive ECG signals we collected, in combination with clinician validated ECG signals from Physiobank. Empirical evaluation confirms accuracy improvements of the proposed approach over the traditional clinical rules.

关键词： Electrocardiography Heart beat Monitoring Biomedical monitoring Robustness Accuracy

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data-mining twitter and the autism spectrum disorder: A Pilot study

Data-mining twitter and the autism spectrum disorder: A Pilo...

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International Conference on Advances in Social Network Analysis and Mining, ASONAM

作者： Adham Beykikhoshk Ognjen Arandjelović Dinh Phung Svetha Venkatesh Terry Caelli Centre for Pattern Recognition and Data Analytics Deakin Univeristy Australia National ICT Australia (NICTA) Melbourne Australia

The autism spectrum disorder (ASD) is increasingly being recognized as a major public health issue which affects approximately 0.5-0.6% of the population. Promoting the general awareness of the disorder, increasing the engagement with the affected individuals and their carers, and understanding the success of penetration of the current clinical recommendations in the target communities, is crucial in driving research as well as policy. The aim of the present work is to investigate if Twitter, as a highly popular platform for information exchange, can be used as a data-mining source which could aid in the aforementioned challenges. Specifically, using a large data set of harvested tweets, we present a series of experiments which examine a range of linguistic and semantic aspects of messages posted by individuals interested in ASD. Our findings, the first of their nature in the published scientific literature, strongly motivate additional research on this topic and present a methodological basis for further work.

关键词： Variable speed drives Twitter Autism Communities data mining Pragmatics Conferences

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Ordinal random fields for recommender systems 6

Ordinal random fields for recommender systems

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6th Asian Conference on Machine Learning, ACML 2014

作者： Liu, Shaowu Tran, Truyen Li, Gang Jiang, Yuan School of Information Technology Deakin University 221 Burwood Highway VIC3125 Australia Pattern Recognition and Data Analytics Deakin University Waurn PondsVIC3216 Australia National Key Laboratory for Novel Software Technology Nanjing University Nanjing210023 China

Recommender Systems heavily rely on numerical preferences, whereas the importance of ordinal preferences has only been recognised in recent works of Ordinal Matrix Factorisation (OMF). Although the OMF can effectively exploit ordinal properties, it captures only the higher-order interactions among users and items, without considering the localised interactions properly. This paper employs Markov Random Fields (MRF) to investigate the localised interactions, and proposes a unified model called Ordinal Random Fields (ORF) to take advantages of both the representational power of the MRF and the ease of modelling ordinal preferences by the OMF. Experimental result on public datasets demonstrates that the proposed ORF model can capture both types of interactions, resulting in improved recommendation accuracy. © 2014 S. Liu, T. Tran, G. Li & Y. Jiang.

关键词： Collaborative filtering

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Multi-Lag HRV analysis discriminates disease progression of postinfarct people with no diabetes versus diabetes

Multi-Lag HRV analysis discriminates disease progression of ...

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Annual International Conference of the IEEE Engineering in Medicine and Biology Society

作者： Chandan Karmakar Herbert F. Jelinek Ahsan Khandoker Mikko Tulppo Timo Makikallio Antti Kiviniemi Heikki Huikuri Marimuthu Palaniswami Centre of Pattern Recognition and Data Analytics (PRaDA) Deakin University Geelong VIC 3220 Australia School of Community Health and Centre for Research in Complex Systems Charles Stuart University NSW 2640 Australia Department of Biomedical Engineering Khalifa University Abu Dhabi UAE Department of Exercise and Medical Physiology Verve Oulu Finland Division of Cardiology Department of Medicine University of Oulu Oulu Finland Electrical & Electronic Engineering Department University of Melbourne Parkville Melbourne VIC 3010 Australia

ISBN: (纸本)9781424492695

Diabetes mellitus is associated with multi-organ system dysfunction including the cardiovascular and autonomic nervous system. Although it is well documented that postinfarct patients are at higher risk of sudden cardiac death, diabetes adds an additional risk associated with autonomic neuropathy. However it is not known how the presence of diabetes in post-infarct patients affects cardiac rhythm. The majority of HRV algorithms for determining cardiac inter-beat interval changes describe only beat-to-beat variation determined over the whole heart rate recording and therefore do not consider the ability of a heart beat to influence a train of succeeding beats nor whether or how the temporal dynamics of the inter-beat intervals changes. This study used Poincaré Plot derived features and incorporated increased lag intervals to compare post-infarct patients with no history of prior infarct with or without diabetes and found that for the nondiabetic post-infarct patients only increased lag of short term correlation (SD1) predicted mortality, whereas in the diabetic post-infarct group only long-term correlations (SD2) significantly predicted mortality at a follow-up period of eight years. Temporal dynamics measured as a complex correlation measure (CCM) was also a significant predictor of mortality only in the diabetic post-infarct cohort. This study highlights the different pathophysiological progression and risk profile associated with presence of diabetes in a post-infarct patient population at eight year follow-up.

关键词： presence diabetes post-infarct patients Diabetes Mellitus Disease Progression Post infarct angina

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Global investments in pandemic preparedness and COVID-19: development assistance and domestic spending on health between 1990 and 2026

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The Lancet Global Health 2023年第3期11卷 e385-e413页

作者： Micah, Angela E. Bhangdia, Kayleigh Cogswell, Ian E. Lasher, Dylan Lidral-Porter, Brendan Maddison, Emilie R. Nguyen, Trang Nhu Ngoc Patel, Nishali Pedroza, Paola Solorio, Juan Stutzman, Hayley Tsakalos, Golsum Wang, Yifeng Warriner, Wesley Zhao, Yingxi Zlavog, Bianca S. Abbafati, Cristiana Abbas, Jaffar Abbasi-Kangevari, Mohsen Abbasi-Kangevari, Zeinab Abdelmasseh, Michael Abdulah, Deldar Morad Abedi, Aidin Abegaz, Kedir Hussein Abhilash, E.S. Aboagye, Richard Gyan Abolhassani, Hassan Abrigo, Michael R.M. Abubaker Ali, Hiwa Abu-Gharbieh, Eman Adem, Mohammed Hussien Afzal, Muhammad Sohail Ahmadi, Ali Ahmed, Haroon Ahmed Rashid, Tarik Aji, Budi Akbarialiabad, Hossein Akelew, Yibeltal Al Hamad, Hanadi Alam, Khurshid Alanezi, Fahad Mashhour Alanzi, Turki M. Al-Hanawi, Mohammed Khaled Alhassan, Robert Kaba Aljunid, Syed Mohamed Almustanyir, Sami Al-Raddadi, Rajaa M. Alvis-Guzman, Nelson Alvis-Zakzuk, Nelson J. Amare, Azmeraw T. Ameyaw, Edward Kwabena Amini-Rarani, Mostafa Amu, Hubert Ancuceanu, Robert Andrei, Tudorel Anwar, Sumadi Lukman Appiah, Francis Aqeel, Muhammad Arabloo, Jalal Arab-Zozani, Morteza Aravkin, Aleksandr Y. Aremu, Olatunde Aruleba, Raphael Taiwo Athari, Seyyed Shamsadin Avila-Burgos, Leticia Ayanore, Martin Amogre Azari, Samad Baig, Atif Amin Bantie, Abere Tilahun Barrow, Amadou Baskaran, Pritish Basu, Sanjay Batiha, Abdul-Monim Mohammad Baune, Bernhard T. Berezvai, Zombor Bhardwaj, Nikha Bhardwaj, Pankaj Bhaskar, Sonu Boachie, Micheal Kofi Bodolica, Virginia Botelho, João Silva Botelho Braithwaite, Dejana Breitborde, Nicholas J.K. Busse, Reinhard Cahuana-Hurtado, Lucero Catalá-López, Ferrán Chansa, Collins Charan, Jaykaran Chattu, Vijay Kumar Chen, Simiao Chukwu, Isaac Sunday Dadras, Omid Dandona, Lalit Dandona, Rakhi Dargahi, Abdollah Debela, Sisay Abebe Denova-Gutiérrez, Edgar Desye, Belay Dharmaratne, Samath Dhamminda Diao, Nancy Doan, Linh Phuong Dodangeh, Milad dos Santos, Wendel Mombaque Doshmangir, Leila Dube, John Eini, Ebrahim El Sayed Zaki, Maysaa El Tantawi, Maha Enyew, Daniel Berhanie Institute for Health Metrics and Evaluation University of Washington Seattle WA United States Department of Applied Mathematics University of Washington Seattle WA United States Department of Health Metrics Sciences School of Medicine University of Washington Seattle WA United States Nuffield Department of Medicine University of Oxford Oxford United Kingdom Department of Juridical and Economic Studies La Sapienza University Rome Italy Antai College of Economics Shanghai Jiao Tong University Shanghai China Non-communicable Diseases Research Center Tehran University of Medical Sciences Tehran Iran Research Center for Immunodeficiencies Tehran University of Medical Sciences Tehran Iran Multiple Sclerosis Research Center Tehran University of Medical Sciences Tehran Iran Children’s Medical Center Tehran University of Medical Sciences Tehran Iran Department of Epidemiology and Biostatistics Tehran University of Medical Sciences Tehran Iran Tehran Heart Center Tehran University of Medical Sciences Tehran Iran Faculty of Medicine Tehran University of Medical Sciences Tehran Iran National Institute for Health Research Tehran University of Medical Sciences Tehran Iran Department of Pharmacology Tehran University of Medical Sciences Tehran Iran Department of Cardiology Tehran University of Medical Sciences Tehran Iran Sina Trauma and Surgery Research Center Tehran University of Medical Sciences Tehran Iran Digestive Diseases Research Institute Tehran University of Medical Sciences Tehran Iran Department of Neurology Tehran University of Medical Sciences Tehran Iran Social Determinants of Health Research Center Shahid Beheshti University of Medical Sciences Tehran Iran Department of Epidemiology Shahid Beheshti University of Medical Sciences Tehran Iran Department of Health Economics and Statistics Shahid Beheshti University of Medical Sciences Tehran Iran Department of Neurosurgery Shahid Beheshti University of Medical Sciences Tehran Iran Ophthalmic R

Background: The COVID-19 pandemic highlighted gaps in health surveillance systems, disease prevention, and treatment globally. Among the many factors that might have led to these gaps is the issue of the financing of national health systems, especially in low-income and middle-income countries (LMICs), as well as a robust global system for pandemic preparedness. We aimed to provide a comparative assessment of global health spending at the onset of the pandemic;characterise the amount of development assistance for pandemic preparedness and response disbursed in the first 2 years of the COVID-19 pandemic;and examine expectations for future health spending and put into context the expected need for investment in pandemic preparedness. Methods: In this analysis of global health spending between 1990 and 2021, and prediction from 2021 to 2026, we estimated four sources of health spending: development assistance for health (DAH), government spending, out-of-pocket spending, and prepaid private spending across 204 countries and territories. We used the Organisation for Economic Co-operation and Development (OECD)'s Creditor Reporting System (CRS) and the WHO Global Health Expenditure database (GHED) to estimate spending. We estimated development assistance for general health, COVID-19 response, and pandemic preparedness and response using a keyword search. Health spending estimates were combined with estimates of resources needed for pandemic prevention and preparedness to analyse future health spending patterns, relative to need. Findings: In 2019, at the onset of the COVID-19 pandemic, US$9·2 trillion (95% uncertainty interval [UI] 9·1–9·3) was spent on health worldwide. We found great disparities in the amount of resources devoted to health, with high-income countries spending $7·3 trillion (95% UI 7·2–7·4) in 2019;293·7 times the $24·8 billion (95% UI 24·3–25·3) spent by low-income countries in 2019. That same year, $43·1 billion in development assistance was provided

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Extraction of latent patterns and contexts from social honest signals using hierarchical Dirichlet processes

Extraction of latent patterns and contexts from social hones...

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11th IEEE International Conference on Pervasive Computing and Communications, PerCom 2013

作者： Nguyen, Thuong Phung, Dinh Gupta, Sunil Venkatesh, S. Centre for Pattern Recognition and Data Analytics Deakin University Australia

ISBN: (纸本)9781467345750

A fundamental task in pervasive computing is reliable acquisition of contexts from sensor data. This is crucial to the operation of smart pervasive systems and services so that they might behave efficiently and appropriately upon a given context. Simple forms of context can often be extracted directly from raw data. Equally important, or more, is the hidden context and pattern buried inside the data, which is more challenging to discover. Most of existing approaches borrow methods and techniques from machine learning, dominantly employ parametric unsupervised learning and clustering techniques. Being parametric, a severe drawback of these methods is the requirement to specify the number of latent patterns in advance. In this paper, we explore the use of Bayesian nonparametric methods, a recent data modelling framework in machine learning, to infer latent patterns from sensor data acquired in a pervasive setting. Under this formalism, nonparametric prior distributions are used for data generative process, and thus, they allow the number of latent patterns to be learned automatically and grow with the data - as more data comes in, the model complexity can grow to explain new and unseen patterns. In particular, we make use of the hierarchical Dirichlet processes (HDP) to infer atomic activities and interaction patterns from honest signals collected from sociometric badges. We show how data from these sensors can be represented and learned with HDP. We illustrate insights into atomic patterns learned by the model and use them to achieve high-performance clustering. We also demonstrate the framework on the popular Reality Mining dataset, illustrating the ability of the model to automatically infer typical social groups in this dataset. Finally, our framework is generic and applicable to a much wider range of problems in pervasive computing where one needs to infer high-level, latent patterns and contexts from sensor data. © 2013 IEEE.

关键词： Ubiquitous computing

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Computer simulation based parameter selection for resistance exercise

Computer simulation based parameter selection for resistance...

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24th IASTED International Conference on Modelling and Simulation, MS 2013

作者： Arandjelović, Ognjen Centre for Pattern Recognition and Data Analytics Deakin University Geelong 3216 VIC Australia

ISBN: (纸本)9780889869561

In contrast to most scientific disciplines, sports science research has been characterized by comparatively little effort investment in the development of relevant phenomenologi-cal models. Scarcer yet is the application of said models in practice. We present a framework which allows resistance training practitioners to employ a recently proposed neu-romuscular model in actual training program design. The first novelty concerns the monitoring aspect of coaching. A method for extracting training performance characteristics from loosely constrained video sequences, effortlessly and with minimal human input, using computer vision is described. The extracted data is subsequently used to fit the underlying neuromuscular model. This is achieved by solving an inverse dynamics problem corresponding to a particular exercise. Lastly, a computer simulation of hypothetical training bouts, using athlete-specific capability parameters, is used to predict the effected adaptation and changes in performance. The software described here allows the practitioner to manipulate hypothetical training parameters and immediately see their effect on predicted adaptation for a specific athlete. Thus, this work presents a holistic view of the monitoring-assessment-adjustment loop.

关键词： Sports

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Split-merge augmented Gibbs sampling for Hierarchical Dirichlet Processes

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17th Pacific-Asia Conference on Knowledge Discovery and data Mining, PAKDD 2013

作者： Rana, Santu Phung, Dinh Venkatesh, Svetha Center for Pattern Recognition and Data Analytics Deakin University Waurn Ponds VIC 3216 Australia

ISBN: (纸本)9783642374555

The Hierarchical Dirichlet Process (HDP) model is an important tool for topic analysis. Inference can be performed through a Gibbs sampler using the auxiliary variable method. We propose a splitmerge procedure to augment this method of inference, facilitating faster convergence. Whilst the incremental Gibbs sampler changes topic assignments of each word conditioned on the previous observations and model hyper-parameters, the split-merge sampler changes the topic assignments over a group of words in a single move. This allows efficient exploration of state space. We evaluate the proposed sampler on a synthetic test set and two benchmark document corpus and show that the proposed sampler enables the MCMC chain to converge faster to the desired stationary distribution. © Springer-Verlag 2013.

关键词： Artificial intelligence

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Latent patient profile modelling and applications with mixed-variate restricted Boltzmann machine 1

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17th Pacific-Asia Conference on Knowledge Discovery and data Mining, PAKDD 2013

作者： Nguyen, Tu Dinh Tran, Truyen Phung, Dinh Venkatesh, Svetha Center for Pattern Recognition and Data Analytics School of Information Technology Deakin University Geelong VIC Australia

ISBN: (数字)9783642374531

ISBN: (纸本)9783642374524

Efficient management of chronic diseases is critical in modern health care. We consider diabetes mellitus, and our ongoing goal is to examine how machine learning can deliver information for clinical efficiency. The challenge is to aggregate highly heterogeneous sources including demographics, diagnoses, pathologies and treatments, and extract similar groups so that care plans can be designed. To this end, we extend our recent model, the mixed-variate restricted Boltzmann machine (***), as it seamlessly integrates multiple data types for each patient aggregated over time and outputs a homogeneous representation called "latent profile" that can be used for patient clustering, visualisation, disease correlation analysis and prediction. We demonstrate that the method outperforms all baselines on these tasks - the primary characteristics of patients in the same groups are able to be identified and the good result can be achieved for the diagnosis codes prediction. © Springer-Verlag 2013.

关键词： Diagnosis

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