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International Conference on Informatics, Multimedia, Cyber and Information System (ICIMCIS)

作者： Faisal Asadi Joko Pebrianto Trinugroho Alam Ahmad Hidayat Reza Rahutomo Bens Pardamean Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia Information System Department School of Information Systems Bina Nusantara University Jakarta Indonesia Computer Science Department BINUS Graduate Program Master of Computer Science Bina Nusantara University Jakarta Indonesia

ISBN: (纸本)9781665473286

Tropical disease is one of the infectious diseases that affect Indonesia. Many people die because of tropical diseases, such as dengue hemorrhagic fever (DHF), chikungunya, leprosy, lymphatic, and filariasis. The Indonesian government's lack of public policy is the main problem in treating and preventing tropical diseases. The paper aims to describe the analysis results of the incidence of DHF in Jakarta, Indonesia. The analysis used the DHF incidences data from the Jakarta Health service surveillance office representative and combined it with the meteorological parameters data. The meteorological parameters were collected from the Bureau of Meteorological Climatology and Geophysics (BMKG). The statistical analysis of this research used Pearson's correlation. The results show that the meteorological parameters affecting DHF incidences are temperature, humidity, and wind speed.

关键词： Correlation Statistical analysis Wind speed Surveillance Multimedia systems Sociology Humidity

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The Technology Behind Genomic Database

The Technology Behind Genomic Database

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International Conference on Cybernetics and Intelligent System (ICORIS)

作者： Joko Pebrianto Trinugroho Anzaludin Samsinga Perbangsa Bens Pardamean Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia Information Systems Department School of Information Systems Bina Nusantara University Jakarta Indonesia Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta Indonesia

ISBN: (纸本)9781665453967

In this digital era, we are exposed to a large amount of data. This includes biological data, which stores information about living organisms, including Deoxyribonucleic acid (DNA), genes, and proteins. With the development of information technology and information system, most of available biological data are stored in an online public database. Many of the databases are free-access and easily used, which helps the users, especially researchers, to make use of the data. Among the known public biological databases are the University of California Santa Cruz (UCSC) Genome Browser Database and the Rat Genome Database (RGD). These two databases provide access to the biological data from different organisms. This paper aims to describe the technology of public biological databases. Also elucidated in this paper are the differences features between UCSC Genome Browser Database and the RGD. Our results showed that the UCSC contains much more biological data and features than the RGD. However, the genome browser of UCSC has a complex display, while the RGD has a simple display. Overall, both databases give the users the option to choose the most suitable database for them.

关键词： Proteins Databases Genomics DNA Rats Biology Organisms

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A Design of Childhood Stunting Assessment Feature with Agile UX Approach

A Design of Childhood Stunting Assessment Feature with Agile...

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HCI and UX Conference in Indonesia (CHIuXiD), International

作者： Reza Rahutomo Anzaludin Samsinga Perbangsa Faisal Asadi Rudi Nirwantono Bens Pardamean Information Systems Department School of Information Systems Bina Nusantara University Jakarta Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia Computer Science Department BINUS Graduate Program – Master of Computer Science Bina Nusantara University Jakarta Indonesia

ISBN: (纸本)9781665476652

multidisciplinary collaboration between public health, system engineering, and UX is able to generate a solution in healthcare problem like stunting. The principle of Agile UX gathers requirements to generate an application design. Currently, various website and mobile applications are available to be utilized for stunting research. StuntingDB is one of many web-based applications that specialized in stunting data management. The application required several types of users to operate hierarchically. This research focused on Public Health Officers’ workflow that require a solution to in the form of assessment module for stunting DBMS by using Agile UX principle. The method collaborates agile team and UX team to solve Public Health Officer's difficulty in changing stunting status at pre-saved child patient's profile. Collaboration of both agile team and UX team successfully proposed an application design that system design.

关键词： Human computer interaction Pediatrics Collaboration Companies Mobile applications Public healthcare System analysis and design

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A Convolutional Neural Network-based Ancient Sundanese Character Classifier with Data Augmentation

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Procedia computer science 2021年 179卷 195-201页

作者： Alam Ahmad Hidayat Kartika Purwandari Tjeng Wawan Cenggoro Bens Pardamean Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia 11480 Computer Science Department School of Computer Science Bina Nusantara University Jakarta Indonesia 11480 Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta Indonesia 11480

With an increasing interest in the digitization effort of ancient manuscripts, ancient character recognition becomes one of the most important areas in the automated document image analysis. In this regard, we propose a Convolutional Neural Network (CNN)-based classifier to recognize the ancient Sundanese characters obtained from a digital collection of Southeast Asian palm leaf manuscripts. In this work, we utilize two different preprocessing techniques for the dataset. The first technique involves the use of geometric transformations, noise background addition, and brightness adjustment to augment the imbalanced samples to be fed into the classifier. The second technique makes use of the Otsu’s threshold method to binarize the characters and only uses the usual geometric transformations for the data augmentation. The proposed network with different data augmentation processes is trained on the training set and tested on the testing set. Image binarization from the second technique can outperform the performance of the CNN-based classifier upon the first technique by achieving a testing accuracy of 97.74%.

关键词： ancient sundanese characters convolutional neural network data augmentation document image analysis Otsu’s threshold method

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Systematic Evaluation of Cross Population Polygenic Risk Score on Colorectal Cancer

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Procedia computer science 2021年 179卷 344-351页

作者： Bharuno Mahesworo Arif Budiarto Bens Pardamean Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia 11480 Computer Science Department School of Computer Science Bina Nusantara University Jakarta Indonesia 11480 Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta Indonesia 11480

The number of findings in cancer genomics research has grown rapidly in the last decade due to the decline in the cost of human sequencing and genotyping. However, the majority of the reported significant marker associated with cancer traits are based on European and East Asian population. Large population such as South Asian and South-East Asian population are under-represented in genomics research. In this study, we explored the possibility of computing a Polygenic Risk Score (PRS) of colorectal cancer on our test sample based on reported significant Single Nucleotide Polymorphism (SNP). The SNPs used to compute the risk score were collected from GWAS Central and GWAS Catalog. Significant SNPs from IC3 study were used as a benchmark. The result shows that calculating colorectal cancer risk score using reported significant marker from different population group is possible. The p-value of our statistic model shows significant differences between case and control group risk score.

关键词： Polygenic Risk Score Cross Population Colorectal Cancer

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Convolutional Neural Networks for Scops Owl Sound Classification

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Procedia computer science 2021年 179卷 81-87页

作者： Alam Ahmad Hidayat Tjeng Wawan Cenggoro Bens Pardamean Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia 11480 Computer Science Department School of Computer Science Bina Nusantara University Jakarta Indonesia 11480 Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta Indonesia 11480

Adopting a deep learning model into bird sound classification tasks becomes a common practice in order to construct a robust automated bird sound detection system. In this paper, we employ a four-layer Convolutional Neural Network (CNN) formulated to classify different species of Indonesia scops owls based on their vocal sounds. Two widely used representations of an acoustic signal: log-scaled mel-spectrogram and Mel Frequency Cepstral Coefficient (MFCC) are extracted from each sound file and fed into the network separately to compare the model performance with different inputs. A more complex CNN that can simultaneously process the two extracted acoustic representations is proposed to provide a direct comparison with the baseline model. The dual-input network is the well-performing model in our experiment that achieves 97.55% Mean Average Precision (MAP). Meanwhile, the baseline model achieves a MAP score of 94.36% for the mel-spectrogram input and 96.08% for the MFCC input.

关键词： acoustic features bird sound classification convolutional neural network mean average precision scops owl

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Towards Adversarial Robustness for Multi-Mode Data through Metric Learning

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Sensors 2023年第13期23卷 6173页

作者： Khan, Sarwar Chen, Jun-Cheng Liao, Wen-Hung Chen, Chu-Song Research Center for Information Technology Innovation Academia Sinica Taipei11529 Taiwan Social Networks Human-Centered Computing Taiwan International Graduate Program Academia Sinica Taipei11529 Taiwan Department of Computer Science National Chengchi University Taipei11605 Taiwan Department of Computer Science and Information Engineering National Taiwan University Taipei106319 Taiwan

Adversarial attacks have become one of the most serious security issues in widely used deep neural networks. Even though real-world datasets usually have large intra-variations or multiple modes, most adversarial defense methods, such as adversarial training, which is currently one of the most effective defense methods, mainly focus on the single-mode setting and thus fail to capture the full data representation to defend against adversarial attacks. To confront this challenge, we propose a novel multi-prototype metric learning regularization for adversarial training which can effectively enhance the defense capability of adversarial training by preventing the latent representation of the adversarial example changing a lot from its clean one. With extensive experiments on CIFAR10, CIFAR100, MNIST, and Tiny ImageNet, the evaluation results show the proposed method improves the performance of different state-of-the-art adversarial training methods without additional computational cost. Furthermore, besides Tiny ImageNet, in the multi-prototype CIFAR10 and CIFAR100 where we reorganize the whole datasets of CIFAR10 and CIFAR100 into two and ten classes, respectively, the proposed method outperforms the state-of-the-art approach by 2.22% and 1.65%, respectively. Furthermore, the proposed multi-prototype method also outperforms its single-prototype version and other commonly used deep metric learning approaches as regularization for adversarial training and thus further demonstrates its effectiveness. © 2023 by the authors.

关键词： Deep neural networks

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The Influence of Business Strategy, Leadership Styles and Business Process on Qality of Accounting Information 5

The Influence of Business Strategy, Leadership Styles and Bu...

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5th International Conference on Software and e-Business, ICSEB 2021

作者： Meiryani, Meiryani Daud, Zaidi Mat Sudrajat, Jajat Andrian, Tommy Liawatimena, Suryadiputra Accounting Department Faculty of Economics and Communication Bina Nusantara University Jakarta11480 Indonesia Accounting Department Faculty of Economics and Business Universiti Putra Malaysia Malaysia BINUS Entrepreneuship Center Management Departement BINUS Business School Undergraduate Program Bina Nusantara University Jakarta11480 Indonesia Computer Science Department BINUS Graduate Program Master of Computer Science Bina Nusantara University Jakarta11480 Indonesia

ISBN: (纸本)9781450385831

This study aims to determine the effect of business strategy on the quality of accounting information, to determine the effect of leadership style on the quality of accounting information and to determine the effect of business processes on the quality of accounting information. This study uses primary data from a population of State-Owned Enterprises throughout Indonesia with a total sample of 61 state-owned enterprises, and is analyzed using a simultaneous equation estimation model or SEM (Structural Equation Modeling), the sample determination is done by purposive sampling. The results showed that (1) leadership style and business processes affect the quality of accounting information systems (2) business strategy has no effect on the quality of accounting information systems on accounting information systems at State-Owned Enterprises in Indonesia. © 2021 ACM.

关键词： Population statistics

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Multiplexed Serial Imaging of Immunotherapy Response with Serrs Nanoprobes

Multiplexed Serial Imaging of Immunotherapy Response with Se...

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IEEE International Symposium on Biomedical Imaging

作者： Naxhije Berisha Konstantinos Plakas Matthieu Gigoux Taha Merghoub Chrysafis Andreou Hunter College of the City University of New York New York NY USA PhD Program in Chemistry The Graduate Center of the City University of New York NY USA Memorial Sloan Kettering Cancer Center New York NY USA Department of Chemistry University at Buffalo The State University of New York Buffalo NY USA Weill Cornell Medicine New York NY USA Department of Electrical and Computer Engineering University of Cyprus Nicosia Cyprus

ISBN: (数字)9798350313338

ISBN: (纸本)9798350313345

With the advent of new and promising cancer therapies, and with increased interest in precision medicine, there is an urgent need to develop non-invasive technologies that evaluate heterogeneity in treatment response. We demonstrate an 8-plex imaging platform based on surface enhanced resonance Raman scattering nanoparticles (SERRS NPs) to monitor the expression of 4 immunomarkers before and after treatment with checkpoint blockade therapy with anti-CTLA4 and anti-PD-1 antibodies in immunotherapy models of colon (CT26) and breast (4T1) cancers. We found that CT26 tumors showed an early treatment response, while the typically refractory 4T1 tumors demonstrated an unexpected treatment response, suggesting that the nanoparticles may have synergistically contributed to the treatment. Serial imaging of multiple markers during therapy can help predict treatment efficacy and uncover new theranostic adjuvants.

关键词： Nanoparticles Multiplexing Precision medicine Raman scattering Immunotherapy Resonance Surface treatment

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A deep learning approach to Lung Nodule Growth Prediction using CT image combined with Demographic and image features 23

A deep learning approach to Lung Nodule Growth Prediction us...

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7th International Conference on Medical and Health Informatics, ICMHI 2023

作者： Li, Ai-Hsien Adams Nguyen, Duc-Khanh Lai, Yen-Jun Chien, Ting-Ying Chiu, Yen-Ling Chan, Chien-Lung Yang, Pan-Chyr Division of Cardiology Far Eastern Memorial Hospital Taipei220 Taiwan Graduate Program in Biomedical Informatics Yuan Ze University Taoyuan City Taiwan Department of Information Management Yuan Ze University Taoyuan320 Taiwan Department of Radiology Far Eastern Memorial Hospital Taipei220 Taiwan Department of Computer Science and Engineering Yuan Ze University Taoyuan City Taiwan Innovation Center for Big Data and Digital Convergence Yuan Ze University Taoyuan City Taiwan Graduate Institute of Medicine and Graduate Program in Biomedical Informatics Yuan Ze University Taoyuan Taiwan Department of Medical Research Far Eastern Memorial Hospital Taipei Taiwan Innovation Center for Big Data and Digital Convergence Yuan Ze University Taoyuan320 Taiwan Institute of Biomedical Sciences Academia Sinica Taipei106 Taiwan Department of Internal Medicine College of Medicine National Taiwan University Taipei100 Taiwan Center of Genomic Medicine National Taiwan University Taipei100 Taiwan

ISBN: (纸本)9798400700712

Lung cancer remains a significant global public health concern, being the leading cause of cancer-related deaths worldwide. Despite recent medical advancements, the disease still has a high mortality rate, making early detection and treatment critical for improving patient outcomes. Accurate prediction of nodule growth is key to early lung cancer treatment, but current assessments offer unclear indications of future growth, leading physicians to recommend costly and anxiety-provoking follow-up appointments every 3 to 12 months. To address this need, this study develops an ensemble deep learning approach that combines demographic data with existing CT images to predict whether lung nodules will grow, potentially reducing unnecessary examinations and easing the burden on patients. Our study, conducted on 862 patients with 1004 nodules, produced promising preliminary results with Accuracy, Sensitivity, Precision, F1 Score, and AUC of 0.66, 0.66, 0.67, 0.66, and 0.71, respectively. The proposed method provides a promising support system to empower patients to make informed decisions about seeking medical attention and helps physicians facilitate early treatment regimens, leading to improved patient outcomes and potentially saving lives. © 2023 ACM.

关键词： Forecasting

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