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Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes

Nature 2022年第7909期605卷 E3页

作者： Jill E Moore Michael J Purcaro Henry E Pratt Charles B Epstein Noam Shoresh Jessika Adrian Trupti Kawli Carrie A Davis Alexander Dobin Rajinder Kaul Jessica Halow Eric L Van Nostrand Peter Freese David U Gorkin Yin Shen Yupeng He Mark Mackiewicz Florencia Pauli-Behn Brian A Williams Ali Mortazavi Cheryl A Keller Xiao-Ou Zhang Shaimae I Elhajjajy Jack Huey Diane E Dickel Valentina Snetkova Xintao Wei Xiaofeng Wang Juan Carlos Rivera-Mulia Joel Rozowsky Jing Zhang Surya B Chhetri Jialing Zhang Alec Victorsen Kevin P White Axel Visel Gene W Yeo Christopher B Burge Eric Lécuyer David M Gilbert Job Dekker John Rinn Eric M Mendenhall Joseph R Ecker Manolis Kellis Robert J Klein William S Noble Anshul Kundaje Roderic Guigó Peggy J Farnham J Michael Cherry Richard M Myers Bing Ren Brenton R Graveley Mark B Gerstein Len A Pennacchio Michael P Snyder Bradley E Bernstein Barbara Wold Ross C Hardison Thomas R Gingeras John A Stamatoyannopoulos Zhiping Weng University of Massachusetts Medical School Program in Bioinformatics and Integrative Biology Worcester MA USA. The Broad Institute of Harvard and MIT Cambridge MA USA. Department of Genetics School of Medicine Stanford University Palo Alto CA USA. Cold Spring Harbor Laboratory Functional Genomics Cold Spring Harbor NY USA. Altius Institute for Biomedical Sciences Seattle WA USA. Department of Medicine University of Washington School of Medicine Seattle WA USA. Department of Cellular and Molecular Medicine Institute for Genomic Medicine Stem Cell Program Sanford Consortium for Regenerative Medicine University of California San Diego La Jolla CA USA. Program in Computational and Systems Biology Massachusetts Institute of Technology Cambridge MA USA. Center for Epigenomics Department of Cellular and Molecular Medicine University of California San Diego La Jolla CA USA. Ludwig Institute for Cancer Research University of California San Diego La Jolla CA USA. Institute for Human Genetics Department of Neurology University of California San Francisco San Francisco CA USA. Genomics Analysis Laboratory The Salk Institute for Biological Studies La Jolla CA USA. HudsonAlpha Institute for Biotechnology Huntsville AL USA. Division of Biology and Biological Engineering California Institute of Technology Pasadena CA USA. Department of Developmental and Cell Biology University of California Irvine Irvine CA USA. Department of Biochemistry and Molecular Biology The Pennsylvania State University University Park PA USA. Environmental Genomics and Systems Biology Division Lawrence Berkeley National Laboratory Berkeley CA USA. Department of Genetics and Genome Sciences Institute for Systems Genomics UConn Health Farmington CT USA. Département de Biochimie et Médecine Moléculaire Université de Montréal Montréal Quebec Canada. Division of Experimental Medicine McGill University Montreal Quebec Canada. Institut de Recherches Cliniques de Montréal (IR

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AN ADVANCED METHODOLOGY FOR PRELIMINARY HULL FORM DEVELOPMENT

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NAVAL ENGINEERS JOURNAL 1984年第4期96卷 147-161页

作者： LIN, WC DAY, WG HOUGH, JJ KEANE, RG WALDEN, DA KOH, IY Wen-Chin Lin:heads the Ship Powering Division at the David Taylor Naval Ship R&D Center (DTNSRDC). Dr. Lin received his B.S. degree in mechanical engineering from the National Taiwan University in 1957. He was awarded his M.S. degree in naval architecture and Ph.D. in engineering science from the University of California at Berkeley in 1963 and 1966 respectively. From 1966 to 1969 he was employed by ESSO Research and Engineering Company to conduct marine hydrodynamic research for oil tankers and offshore structures. Since joining DTNSRDC in 1969 he has actively conducted and directed hydrodynamic research to advance naval ship design technology and improve ship performance. Active in national and international symposia on ship hydrodynamic research he is recognized for contributions to the ship research community. For the past six years he has been a member of the Performance Committee of the ITTC and currently serves as secretary of the committee. He is a member of SNAME and the Society of Naval Architects of Japan. William G. Day Jr:. has been employed as a naval architect at the David Taylor Naval Ship R&D Center since receiving a B.E.S. degree from the Johns Hopkins University in 1966. He obtained an M.S. E. degree from George Washington University in 1971. As Head Design Evaluation Branch of the Ship Performance Department he is responsible for model experiments to evaluate the hydrodynamic performance of ships and propulsors. He is a member of ASNE and SNAME. In-Young Koh:received his B.S. and M.S. degrees in electrical engineering from Lowell University in 1969 and 1971 respectively and his Ph.D. in applied mechanics from Rensselaer Polytechnic Institute in 1976. Dr. Koh joined DTNSRDC as an electronic engineer specializing in the application of advanced instrumentation and computer techniques to ship research and design. He is currently engaged in research and development of active control systems for naval ship applications. Dr. Koh is a member of ASNE SNAME and IEEE. David Andrew Walden:is

A ship design methodology is presented for developing hull forms that attain improved performance in both seakeeping and resistance. Contrary to traditional practice, the methodology starts with developing a seakeeping-optimized hull form without making concessions to other performance considerations, such as resistance. The seakeeping-optimized hull is then modified to improve other performance characteristics without degrading the seakeeping. Presented is a point-design example produced by this methodology. Merits of the methodology and the point design are assessed on the basis of theoretical calculations and model experiments. This methodology is an integral part of the Hull Form Design System (HFDS) being developed for computer-supported naval ship design. The modularized character of HFDS and its application to hull form development are discussed.

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LifeTime and improving European healthcare through cell-based interceptive medicine (vol 587, pg 377, 2020)

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NATURE 2021年第7852期592卷 E8-E8页

作者： Rajewsky, Nikolaus Almouzni, Genevieve Gorski, Stanislaw A. Aerts, Stein Amit, Ido Bertero, Michela G. Bock, Christoph Bredenoord, Annelien L. Cavalli, Giacomo Chiocca, Susanna Clevers, Hans De Strooper, Bart Eggert, Angelika Ellenberg, Jan Fernandez, Xose M. Figlerowicz, Marek Gasser, Susan M. Hubner, Norbert Kjems, Jorgen Knoblich, Jurgen A. Krabbe, Grietje Lichter, Peter Linnarsson, Sten Marine, Jean-Christophe Marioni, John C. Marti-Renom, Marc A. Netea, Mihai G. Nickel, Dorthe Nollmann, Marcelo Novak, Halina R. Parkinson, Helen Piccolo, Stefano Pinheiro, Ines Pombo, Ana Popp, Christian Reik, Wolf Roman-Roman, Sergio Rosenstiel, Philip Schultze, Joachim L. Stegle, Oliver Tanay, Amos Testa, Giuseppe Thanos, Dimitris Theis, Fabian J. Torres-Padilla, Maria-Elena Valencia, Alfonso Vallot, Celine van Oudenaarden, Alexander Vidal, Marie Voet, Thierry Berlin Institute for Medical Systems Biology Max Delbrück Center for Molecular Medicine in the Helmholtz Association Berlin Germany Charité-Universitätsmedizin Berlin Germany Berlin Institute of Health (BIH) Berlin Germany German Center for Cardiovascular Research (DZHK) Partner Site Berlin Berlin Germany Institute for Biology Humboldt University of Berlin Berlin Germany Cardiovascular and Metabolic Sciences Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC) Berlin Germany Department of Pediatric Oncology/Hematology Charité-Universitätsmedizin Berlin Berlin Germany Institut Curie CNRS PSL Research University Sorbonne Université Nuclear Dynamics Unit Equipe Labellisée Ligue contre le cancer Paris France VIB Center for Brain and Disease Research Leuven Belgium Department of Human Genetics KU Leuven Leuven Belgium Department of Neurosciences KU Leuven Leuven Belgium UK Dementia Research Institute at UCL University College London London UK Wellcome Sanger Institute Wellcome Genome Campus Cambridge UK Department of Immunology Weizmann Institute of Science Rehovot Israel Centre for Genomic Regulation (CRG) Barcelona Institute of Science and Technology Barcelona Spain CNAG-CRG Centre for Genomic Regulation Barcelona Institute of Science and Technology Barcelona Spain Universitat Pompeu Fabra Barcelona Spain ICREA Barcelona Spain CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences Vienna Austria Department of Laboratory Medicine Medical University of Vienna Vienna Austria Ludwig Boltzmann Institute for Rare and Undiagnosed Diseases Vienna Austria Department of Medical Humanities Julius Center for Health Sciences and Primary Care University Medical Center Utrecht Utrecht The Netherlands Institute of Human Genetics UMR 9002 CNRS and University of Montpellier Montpellier France Department of Experimental Oncology IEO European Institute of Oncology IRCCS Milan Italy Department of Oncology and Hemato

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Global burden of 369 diseases and injuries in 204 countries and territories, 1990–2019: a systematic analysis for the Global Burden of Disease Study 2019

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The Lancet 2020年第10258期396卷 1204-1222页

作者： Abbafati, Cristiana Abbas, Kaja M. Abbasi, Mohammad Abbasifard, Mitra Abbasi-Kangevari, Mohsen Abbastabar, Hedayat Abd-Allah, Foad Abdelalim, Ahmed Abdollahi, Mohammad Abdollahpour, Ibrahim Abedi, Aidin Abedi, Parisa Abegaz, Kedir Hussein Abolhassani, Hassan Abosetugn, Akine Eshete Aboyans, Victor Abrams, Elissa M. Abreu, Lucas Guimarães Abrigo, Michael R.M. Abu Haimed, Abdulaziz Khalid Abualhasan, Ahmed Abu-Gharbieh, Eman Abu-Raddad, Laith Jamal Abushouk, Abdelrahman I. Acebedo, Alyssa Ackerman, Ilana N. Adabi, Maryam Adair, Tim Adamu, Abdu A. Adebayo, Oladimeji M. Adedeji, Isaac Akinkunmi Adekanmbi, Victor Adelson, Jaimie D. Adeoye, Abiodun Moshood Adetokunboh, Olatunji O. Adham, Davoud Advani, Shailesh M. Afarideh, Mohsen Afshari, Mahdi Afshin, Ashkan Agardh, Emilie E. Agarwal, Gina Agasthi, Pradyumna Agesa, Kareha M. Aghaali, Mohammad Aghamir, Seyed Mohammad Kazem Agrawal, Anurag Ahmad, Tauseef Ahmadi, Alireza Ahmadi, Keivan Ahmadi, Mehdi Ahmadieh, Hamid Ahmadpour, Ehsan Ahmed, Muktar Beshir Aji, Budi Akalu, Temesgen Yihunie Akinyemi, Rufus Olusola Akinyemiju, Tomi Akombi, Blessing Akunna, Chisom Joyqueenet Alahdab, Fares Al-Aly, Ziyad Alam, Khurshid Alam, Noore Alam, Samiah Alam, Tahiya Alanezi, Fahad Mashhour Alanzi, Turki M. Albertson, Samuel B. Alcalde-Rabanal, Jacqueline Elizabeth Alema, Niguse Meles Alemu, Biresaw Wassihun Alemu, Yihun Mulugeta Alhabib, Khalid F. Alhassan, Robert Kaba Ali, Muhammad Ali, Saqib Alicandro, Gianfranco Alijanzadeh, Mehran Alinia, Cyrus Alipour, Vahid Alizade, Hesam Aljunid, Syed Mohamed Alla, François Allebeck, Peter Almadi, Majid Abdulrahman Hamad Almasi, Ali Almasi-Hashiani, Amir Almasri, Nihad A. Al-Mekhlafi, Hesham M. Almulhim, Abdulaziz M. Alonso, Jordi Al-Raddadi, Rajaa M. Altirkawi, Khalid A. Alumran, Arwa Khalid Alvis-Guzman, Nelson Alvis-Zakzuk, Nelson J. Amare, Azmeraw T. Amare, Bekalu Amini, Saeed Amini-Rarani, Mostafa Aminorroaya, Arya Amiri, Fatemeh Amit, Arianna Maever L. Amugsi, Dickson A. Amul, Gianna Gayle Herrera Anbesu, Etsay Woldu Ancuceanu, Robert Anderl Department of Juridical and Economic Studies La Sapienza University Rome Italy Department of Infectious Disease Epidemiology London School of Hygiene and Tropical Medicine London United Kingdom Social Determinants of Health Research Center Tehran Iran Department of Neurology Cairo University Cairo Egypt School of Pharmacy Tehran Iran The Institute of Pharmaceutical Sciences (TIPS) Tehran Iran Neuroscience Research Center Isfahan University of Medical Sciences Isfahan Iran Biostatistics Department Near East University Nicosia Cyprus Biostatistics and Health Informatics Madda Walabu University Bale Robe Ethiopia Research Center for Immunodeficiencies Tehran Iran Karolinska University Hospital Huddinge Sweden Department of Cardiology Dupuytren University Hospital Limoges France University of Limoges Limoges France Department of Pediatric Dentistry Federal University of Minas Gerais Belo Horizonte Brazil Department of Research Philippine Institute for Development Studies Quezon City Philippines Department of Healthcare Policy and Research Weill Cornell Medical College in Qatar Doha Qatar Harvard Medical School Boston MA United States Department of Medicine Ain Shams University Cairo Egypt Hamadan University of Medical Sciences Hamadan Iran School of Medicine Cardiff University Cardiff United Kingdom School of Laboratory Medicine and Science University College Hospital Ibadan Ibadan Nigeria Institute of Cardiovascular Diseases University of Ibadan Ibadan Nigeria Centre of Excellence for Epidemiological Modelling and Analysis Stellenbosch University Cape Town South Africa Department of Global Health Stellenbosch University Cape Town South Africa School of Health Ardabil University of Medical Science Ardabil Iran Social Behavioral Research Branch National Institute of Health Bethesda MD United States Department of Oncology Georgetown University Washington DC DC United States Department of Health Metrics Sciences School of Medicine Seattle WA

Background: In an era of shifting global agendas and expanded emphasis on non-communicable diseases and injuries along with communicable diseases, sound evidence on trends by cause at the national level is essential. The Global Burden of Diseases, Injuries, and Risk Factors Study (GBD) provides a systematic scientific assessment of published, publicly available, and contributed data on incidence, prevalence, and mortality for a mutually exclusive and collectively exhaustive list of diseases and injuries. Methods: GBD estimates incidence, prevalence, mortality, years of life lost (YLLs), years lived with disability (YLDs), and disability-adjusted life-years (DALYs) due to 369 diseases and injuries, for two sexes, and for 204 countries and territories. Input data were extracted from censuses, household surveys, civil registration and vital statistics, disease registries, health service use, air pollution monitors, satellite imaging, disease notifications, and other sources. Cause-specific death rates and cause fractions were calculated using the Cause of Death Ensemble model and spatiotemporal Gaussian process regression. Cause-specific deaths were adjusted to match the total all-cause deaths calculated as part of the GBD population, fertility, and mortality estimates. Deaths were multiplied by standard life expectancy at each age to calculate YLLs. A Bayesian meta-regression modelling tool, DisMod-MR 2.1, was used to ensure consistency between incidence, prevalence, remission, excess mortality, and cause-specific mortality for most causes. Prevalence estimates were multiplied by disability weights for mutually exclusive sequelae of diseases and injuries to calculate YLDs. We considered results in the context of the Socio-demographic Index (SDI), a composite indicator of income per capita, years of schooling, and fertility rate in females younger than 25 years. Uncertainty intervals (UIs) were generated for every metric using the 25th and 975th ordered 1000 draw value

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First Constraints on the Epoch of Reionization Using the non-Gaussianity of the Kinematic Sunyaev-Zel’dovich Effect from the South Pole Telescope and Herschel-SPIRE Observations

arXiv

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arXiv 2024年

作者： Raghunathan, S. Ade, P.A.R. Anderson, A.J. Ansarinejad, B. Archipley, M. Austermann, J.E. Balkenhol, L. Beall, J.A. Benabed, K. Bender, A.N. Benson, B.A. Bianchini, F. Bleem, L.E. Bock, J. Bouchet, F.R. Bryant, L. Camphuis, E. Carlstrom, J.E. Cecil, T.W. Chang, C.L. Chaubal, P. Chiang, H.C. Chichura, P.M. Chou, T.-L. Citron, R. Coerver, A. Crawford, T.M. Crites, A.T. Cukierman, A. Daley, C. Dibert, K.R. Dobbs, M.A. Doussot, A. Dutcher, D. Everett, W. Feng, C. Ferguson, K.R. Fichman, K. Foster, A. Galli, S. Gallicchio, J. Gambrel, A.E. Gardner, R.W. Ge, F. George, E.M. Goeckner-Wald, N. Gualtieri, R. Guidi, F. Guns, S. Gupta, N. de Haan, T. Halverson, N.W. Hivon, E. Holder, G.P. Holzapfel, W.L. Hood, J.C. Hrubes, J.D. Hryciuk, A. Huang, N. Hubmayr, J. Irwin, K.D. Kéruzoré, F. Khalife, A.R. Knox, L. Korman, M. Kornoelje, K. Kuo, C.-L. Lee, A.T. Levy, K. Li, D. Lowitz, A.E. Lu, C. Maniyar, A. Martsen, E.S. McMahon, J.J. Menanteau, F. Millea, M. Montgomery, J. Moran, C. Corbett Nakato, Y. Natoli, T. Nibarger, J.P. Noble, G.I. Novosad, V. Omori, Y. Padin, S. Pan, Z. Paschos, P. Patil, S. Phadke, K.A. Prabhu, K. Pryke, C. Quan, W. Rahimi, M. Rahlin, A. Reichardt, C.L. Rouble, M. Ruhl, J.E. Saliwanchik, B.R. Schaffer, K.K. Schiappucci, E. Sievers, C. Smecher, G. Sobrin, J.A. Stark, A.A. Stephen, J. Suzuki, A. Tandoi, C. Thompson, K.L. Thorne, B. Trendafilova, C. Tucker, C. Umilta, C. Veach, T. Vieira, J.D. Viero, M.P. Wan, Y. Wang, G. Whitehorn, N. Wu, W.L.K. Yefremenko, V. Young, M.R. Zebrowski, J.A. Zemcov, M. Center for AstroPhysical Surveys National Center for Supercomputing Applications UrbanaIL61801 United States School of Physics and Astronomy Cardiff University CardiffCF24 3YB United Kingdom Fermi National Accelerator Laboratory MS209 P.O. Box 500 BataviaIL60510 United States Kavli Institute for Cosmological Physics University of Chicago 5640 South Ellis Avenue ChicagoIL60637 United States Department of Astronomy and Astrophysics University of Chicago 5640 South Ellis Avenue ChicagoIL60637 United States School of Physics University of Melbourne ParkvilleVIC3010 Australia Department of Astronomy University of Illinois Urbana-Champaign 1002 West Green Street UrbanaIL61801 United States NIST Quantum Devices Group 325 Broadway Mailcode 817.03 BoulderCO80305 United States Department of Physics University of Colorado BoulderCO80309 United States Institut d’Astrophysique de Paris UMR 7095 CNRS & Sorbonne Université 98 bis boulevard Arago Paris75014 France High-Energy Physics Division Argonne National Laboratory 9700 South Cass Avenue. LemontIL60439 United States Kavli Institute for Particle Astrophysics and Cosmology Stanford University 452 Lomita Mall StanfordCA94305 United States Department of Physics Stanford University 382 Via Pueblo Mall StanfordCA94305 United States SLAC National Accelerator Laboratory 2575 Sand Hill Road Menlo ParkCA94025 United States California Institute of Technology PasadenaCA91125 United States Jet Propulsion Laboratory California Institute of Technology PasadenaCA91109 United States Enrico Fermi Institute University of Chicago 5640 South Ellis Avenue ChicagoIL60637 United States Department of Physics University of Chicago 5640 South Ellis Avenue ChicagoIL60637 United States Department of Physics McGill Space Institute McGill University 3600 Rue University MontrealQCH3A 2T8 Canada School of Mathematics Statistics & Computer Science University of KwaZulu-Natal Durban South Africa Unive

We report results from an analysis aimed at detecting the trispectrum of the kinematic Sunyaev-Zel’dovich (kSZ) effect by combining data from the South Pole Telescope (SPT) and Herschel-SPIRE experiments over a 100 deg2 field. The SPT observations combine data from the previous and current surveys, namely SPTpol and SPT-3G, to achieve depths of 4.5, 3, and 16 µK-arcmin in bands centered at 95, 150, and 220 GHz. For SPIRE, we include data from the 600 and 857 GHz bands. We reconstruct the velocity-induced large-scale correlation of the small-scale kSZ signal with a quadratic estimator that uses two cosmic microwave background (CMB) temperature maps, constructed by optimally combining data from all the frequency bands. We reject the null hypothesis of a zero trispectrum at 10.3σ level. However, the measured trispectrum contains contributions from both the kSZ and other undesired components, such as CMB lensing and astrophysical foregrounds, with kSZ being sub-dominant. We use the Agora simulations to estimate the expected signal from CMB lensing and astrophysical foregrounds. After accounting for the contributions from CMB lensing and foreground signals, we do not detect an excess kSZ-only trispectrum and use this non-detection to set constraints on reionization. By applying a prior based on observations of the Gunn-Peterson trough, we obtain an upper limit on the duration of reionization of (formula presented). We find these constraints are fairly robust to foregrounds assumptions. This trispectrum measurement is independent of, but consistent with, Planck’s optical depth measurement. This result is the first constraint on the epoch of reionization using the non-Gaussian nature of the kSZ signal. © 2024, CC BY.

关键词： Kinematics

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The SPTpol extended cluster survey

arXiv

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arXiv 2019年

作者： Bleem, L.E. Bocquet, S. Stalder, B. Gladders, M.D. Ade, P.A.R. Allen, S.W. Anderson, A.J. Annis, J. Ashby, M.L.N. Austermann, J.E. Avila, S. Avva, J.S. Bayliss, M. Beall, J.A. Bechtol, K. Bender, A.N. Benson, B.A. Bertin, E. Bianchini, F. Blake, C. Brodwin, M. Brooks, D. Buckley-Geer, E. Burke, D.L. Carlstrom, J.E. Carnero Rosell, A. Carrasco Kind, M. Carretero, J. Chang, C.L. Chiang, H.C. Citron, R. Corbett Moran, C. Costanzi, M. Crawford, T.M. Crites, A.T. da Costa, L.N. de Haan, T. de Vicente, J. Desai, S. Diehl, H.T. Dietrich, J.P. Dobbs, M.A. Eifler, T.F. Everett, W. Flaugher, B. Floyd, B. Frieman, J. Gallicchio, J. García-Bellido, J. George, E.M. Gerdes, D.W. Gilbert, A. Gruen, D. Gruendl, R.A. Gschwend, J. Gupta, N. Gutierrez, G. Halverson, N.W. Harrington, N. Henning, J.W. Heymans, C. Holder, G.P. Hollowood, D.L. Holzapfel, W.L. Honscheid, K. Hrubes, J.D. Huang, N. Hubmayr, J. Irwin, K.D. James, D.J. Jeltema, T. Joudaki, S. Khullar, G. Klein, M. Knox, L. Kuropatkin, N. Lee, A.T. Li, D. Lidman, C. Lowitz, A. MacCrann, N. Mahler, G. Maia, M.A.G. Marshall, J.L. McDonald, M. McMahon, J.J. Melchior, P. Menanteau, F. Meyer, S.S. Miquel, R. Mocanu, L.M. Mohr, J.J. Montgomery, J. Nadolski, A. Natoli, T. Nibarger, J.P. Noble, G. Novosad, V. Padin, S. Palmese, A. Parkinson, D. Patil, S. Paz-Chinchón, F. Plazas, A.A. Pryke, C. Ramachandra, N.S. Reichardt, C.L. Remolina González, J.D. Romer, A.K. Roodman, A. Ruhl, J.E. Rykoff, E.S. Saliwanchik, B.R. Sanchez, E. Saro, A. Sayre, J.T. Schaffer, K.K. Schrabback, T. Serrano, S. Sharon, K. Sievers, C. Smecher, G. Smith, M. Soares-Santos, M. Stark, A.A. Story, K.T. Suchyta, E. Tarle, G. Tucker, C. Vanderlinde, K. Veach, T. Vieira, J.D. Wang, G. Weller, J. Whitehorn, N. Wu, W.L.K. Yefremenko, V. Zhang, Y. High Energy Physics Division Argonne National Laboratory 9700 South Cass Avenue LemontIL60439 United States Kavli Institute for Cosmological Physics University of Chicago 5640 South Ellis Avenue ChicagoIL60637 United States Department of Physics Ludwig-Maximilians-Universität Scheinerstr. 1 München81679 Germany LSST 933 North Cherry Avenue TucsonAZ85721 United States Center for Astrophysics Harvard & Smithsonian 60 Garden Street CambridgeMA02138 United States Department of Astronomy and Astrophysics University of Chicago 5640 South Ellis Avenue ChicagoIL60637 United States Cardiff University CardiffCF10 3XQ United Kingdom Kavli Institute for Particle Astrophysics & Cosmology Stanford University P. O. Box 2450 StanfordCA94305 United States Department of Physics Stanford University 382 Via Pueblo Mall StanfordCA94305 United States SLAC National Accelerator Laboratory 2575 Sand Hill Road Menlo ParkCA94025 United States Fermi National Accelerator Laboratory P. O. Box 500 BataviaIL60510 United States NIST Quantum Devices Group 325 Broadway Mailcode 817.03 BoulderCO80305 United States Instituto de Fisica Teorica UAM/CSIC Universidad Autonoma de Madrid Madrid28049 Spain Department of Physics University of California BerkeleyCA94720 United States Kavli Institute for Astrophysics and Space Research Massachusetts Institute of Technology 77 Massachusetts Avenue CambridgeMA02139 United States Department of Physics University of Cincinnati CincinnatiOH45221 United States Physics Department 2320 Chamberlin Hall University of Wisconsin-Madison 1150 University Avenue MadisonWI53706-1390 United States CNRS UMR 7095 Institut d’Astrophysique de Paris ParisF-75014 France Sorbonne Universités UPMC Univ Paris 06 UMR 7095 Institut d’Astrophysique de Paris ParisF-75014 France School of Physics University of Melbourne ParkvilleVIC3010 Australia Centre for Astrophysics & Supercomputing Swinburne University of Technology P.O. Box 21

We describe the observations and resultant galaxy cluster catalog from the 2770 deg2 SPTpol Extended Cluster Survey (SPT-ECS). Clusters are identified via the Sunyaev-Zel’dovich (SZ) effect, and confirmed with a combination of archival and targeted follow-up data, making particular use of data from the Dark Energy Survey (DES). With incomplete followup we have confirmed as clusters 244 of 266 candidates at a detection significance ξ ≥ 5 and an additional 204 systems at 4 500c ∼ 4.4 × 1014M*h−701 and a median redshift of z = 0.49, and we have identified 44 strong gravitational lenses in the sample thus far. Radio data are used to characterize contamination to the SZ signal;the median contamination for confirmed clusters is predicted to be ∼1% of the SZ signal at the ξ > 4 threshold, and 10% of their measured SZ flux. We associate SZ-selected clusters, from both SPT-ECS and the SPT-SZ survey, with clusters from the DES redMaPPer sample, and find an offset distribution between the SZ center and central galaxy in general agreement with previous work, though with a larger fraction of clusters with significant offsets. Adopting a fixed Planck-like cosmology, we measure the optical richness-to-SZ-mass (λ − M) relation and find it to be 28% shallower than that from a weak-lensing analysis of the DES data—a difference significant at the 4 σ level—with the relations intersecting at λ = 60 . The SPT-ECS cluster sample will be particularly useful for studying the evolution of massive clusters and, in combination with DES lensing observations and the SPT-SZ cluster sample, will be an important component of future cosmological analyses. Copyright © 2019, The Authors. All rights reserved.

关键词： Galaxies

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Erratum to: The sponge microbiome project

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Gigascience 2018年第12期7卷 giy145页

作者： Lucas Moitinho-Silva Shaun Nielsen Amnon Amir Antonio Gonzalez Gail L Ackermann Carlo Cerrano Carmen Astudillo-Garcia Cole Easson Detmer Sipkema Fang Liu Georg Steinert Giorgos Kotoulas Grace P McCormack Guofang Feng James J Bell Jan Vicente Johannes R Björk Jose M Montoya Julie B Olson Julie Reveillaud Laura Steindler Mari-Carmen Pineda Maria V Marra Micha Ilan Michael W Taylor Paraskevi Polymenakou Patrick M Erwin Peter J Schupp Rachel L Simister Rob Knight Robert W Thacker Rodrigo Costa Russell T Hill Susanna Lopez-Legentil Thanos Dailianis Timothy Ravasi Ute Hentschel Zhiyong Li Nicole S Webster Torsten Thomas Centre for Marine Bio-Innovation and School of Biological Earth and Environmental Sciences The University of New South Wales Sydney 2052 Australia. Department of Pediatrics University of California - San Diego La Jolla CA 92093 USA. Department of Life and Environmental Sciences Polytechnic University of Marche Ancona 60131 Italy. School of Biological Sciences University of Auckland Auckland New Zealand. Halmos College of Natural Sciences and Oceanography Nova Southeastern University Dania Beach FL 33004 USA. Wageningen University Laboratory of Microbiology Stippeneng 4 6708 WE Wageningen The Netherlands. State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology Shanghai Jiao Tong University Shanghai 200240 P.R. China. Hellenic Centre for Marine Research Institute of Marine Biology Biotechnology and Aquaculture Thalassocosmos 71500 Heraklion Greece. Zoology School of Natural Sciences Ryan Institute National University of Ireland Galway University Rd. Galway Ireland. School of Biological Sciences Victoria University of Wellington Wellington New Zealand. Hawaii Institute of Marine Biology 46-007 Lilipuna Road Kaneohe HI 96744-1346. Galvin Life Science Center University of Notre Dame Notre Dame IN 46556 USA. Ecological Networks and Global Change Group Theoretical and Experimental Ecology Station CNRS and Paul Sabatier University Moulis France. Department of Biological Sciences University of Alabama Tuscaloosa AL 35487 USA. INRA UMR1309 CMAEE Cirad UMR15 CMAEE 34398 Montpellier France. Department of Marine Biology Leon H. Charney School of Marine Sciences University of Haifa Haifa Israel. Australian Institute of Marine Science (AIMS) Townsville 4810 Queensland Australia. Department of Zoology George S. Wise Faculty of Life Sciences Tel Aviv University Tel Aviv 69978 Israel. Department of Biology and Marine Biology University of North Carolina Wilmington Wilmington NC 28409 USA. Institute for Chemistry and Biolog

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Detection of CMB-Cluster Lensing using Polarization Data from SPTpol

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Physical Review Letters 2019年第18期123卷 181301-181301页

作者： S. Raghunathan S. Patil E. Baxter B. A. Benson L. E. Bleem T. M. Crawford G. P. Holder T. McClintock C. L. Reichardt T. N. Varga N. Whitehorn P. A. R. Ade S. Allam A. J. Anderson J. E. Austermann S. Avila J. S. Avva D. Bacon J. A. Beall A. N. Bender F. Bianchini S. Bocquet D. Brooks D. L. Burke J. E. Carlstrom J. Carretero F. J. Castander C. L. Chang H. C. Chiang R. Citron M. Costanzi A. T. Crites L. N. da Costa S. Desai H. T. Diehl J. P. Dietrich M. A. Dobbs P. Doel S. Everett A. E. Evrard C. Feng B. Flaugher P. Fosalba J. Frieman J. Gallicchio J. García-Bellido E. Gaztanaga E. M. George T. Giannantonio A. Gilbert R. A. Gruendl J. Gschwend N. Gupta G. Gutierrez T. de Haan N. W. Halverson N. Harrington J. W. Henning G. C. Hilton D. L. Hollowood W. L. Holzapfel K. Honscheid J. D. Hrubes N. Huang J. Hubmayr K. D. Irwin T. Jeltema M. Carrasco Kind L. Knox N. Kuropatkin O. Lahav A. T. Lee D. Li M. Lima A. Lowitz M. A. G. Maia J. L. Marshall J. J. McMahon P. Melchior F. Menanteau S. S. Meyer R. Miquel L. M. Mocanu J. J. Mohr J. Montgomery C. Corbett Moran A. Nadolski T. Natoli J. P. Nibarger G. Noble V. Novosad R. L. C. Ogando S. Padin A. A. Plazas C. Pryke D. Rapetti A. K. Romer A. Roodman A. Carnero Rosell E. Rozo J. E. Ruhl E. S. Rykoff B. R. Saliwanchik E. Sanchez J. T. Sayre V. Scarpine K. K. Schaffer M. Schubnell S. Serrano I. Sevilla-Noarbe C. Sievers G. Smecher M. Smith M. Soares-Santos A. A. Stark K. T. Story E. Suchyta M. E. C. Swanson G. Tarle C. Tucker K. Vanderlinde T. Veach J. De Vicente J. D. Vieira V. Vikram G. Wang W. L. K. Wu V. Yefremenko Y. Zhang Department of Physics and Astronomy University of California Los Angeles California 90095 USA School of Physics University of Melbourne Parkville VIC 3010 Australia Department of Physics and Astronomy University of Pennsylvania Philadelphia Pennsylvania 19104 USA Fermi National Accelerator Laboratory MS209 P.O. Box 500 Batavia Illinois 60510 USA Kavli Institute for Cosmological Physics University of Chicago 5640 South Ellis Avenue Chicago Illinois 60637 USA Department of Astronomy and Astrophysics University of Chicago 5640 South Ellis Avenue Chicago Illinois 60637 USA High Energy Physics Division Argonne National Laboratory 9700 S. Cass Avenue Argonne Illinois 60439 USA Astronomy Department University of Illinois at Urbana-Champaign 1002 W. Green Street Urbana Illinois 61801 USA Department of Physics University of Illinois Urbana-Champaign 1110 W. Green Street Urbana Illinois 61801 USA Canadian Institute for Advanced Research CIFAR Program in Gravity and the Extreme Universe Toronto Ontario M5G 1Z8 Canada Department of Physics University of Arizona Tucson Arizona 85721 USA Max Planck Institute for Extraterrestrial Physics Giessenbachstrasse Garching 85748 Germany Universitäts-Sternwarte Fakultät für Physik LudwigMaximilians Universität München Scheinerstr. 1 München 81679 Germany Cardiff University Cardiff CF10 3XQ United Kingdom Fermi National Accelerator Laboratory P. O. Box 500 Batavia Illinois 60510 USA NIST Quantum Devices Group 325 Broadway Mailcode 817.03 Boulder Colorado 80305 USA Instituto de Fisica Teorica UAM/CSIC Universidad Autonoma de Madrid 28049 Madrid Spain Department of Physics University of California Berkeley California 94720 USA Institute of Cosmology & Gravitation University of Portsmouth Dennis Sciama Building Burnaby Road Portsmouth PO1 3FX United Kingdom Faculty of Physics Ludwig-Maximilians-Universität Scheinerstr. 1 Munich 81679 Germany Department of Physics & Astronomy University College London Gower

We report the first detection of gravitational lensing due to galaxy clusters using only the polarization of the cosmic microwave background (CMB). The lensing signal is obtained using a new estimator that extracts the lensing dipole signature from stacked images formed by rotating the cluster-centered Stokes QU map cutouts along the direction of the locally measured background CMB polarization gradient. Using data from the SPTpol 500 deg2 survey at the locations of roughly 18 000 clusters with richness λ≥10 from the Dark Energy Survey (DES) Year-3 full galaxy cluster catalog, we detect lensing at 4.8σ. The mean stacked mass of the selected sample is found to be (1.43±0.40)×1014M⊙ which is in good agreement with optical weak lensing based estimates using DES data and CMB-lensing based estimates using SPTpol temperature data. This measurement is a key first step for cluster cosmology with future low-noise CMB surveys, like CMB-S4, for which CMB polarization will be the primary channel for cluster lensing measurements.

关键词： Cosmic microwave background Gravitational lenses Galaxy clusters

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Analysis of the BraTS 2023 Intracranial Meningioma Segmentation Challenge

arXiv

引用

arXiv 2024年

作者： LaBella, Dominic Baid, Ujjwal Khanna, Omaditya McBurney-Lin, Shan McLean, Ryan Nedelec, Pierre Rashid, Arif Tahon, Nourel Hoda Altes, Talissa Bhalerao, Radhika Dhemesh, Yaseen Godfrey, Devon Hilal, Fathi Floyd, Scott Janas, Anastasia Kazerooni, Anahita Fathi Kirkpatrick, John Kent, Collin Kofler, Florian Leu, Kevin Maleki, Nazanin Menze, Bjoern Pajot, Maxence Reitman, Zachary J. Rudie, Jeffrey D. Saluja, Rachit Velichko, Yury Wang, Chunhao Warman, Pranav Adewole, Maruf Albrecht, Jake Anazodo, Udunna Anwar, Syed Muhammad Bergquist, Timothy Chen, Sully Francis Chung, Verena Conte, Gian-Marco Dako, Farouk Eddy, James Ezhov, Ivan Khalili, Nastaran Iglesias, Juan Eugenio Jiang, Zhifan Johanson, Elaine Van Leemput, Koen Li, Hongwei Bran Linguraru, Marius George Liu, Xinyang Mahtabfar, Aria Meier, Zeke Moawad, Ahmed W. Mongan, John Piraud, Marie Shinohara, Russell Takeshi Wiggins, Walter F. Abayazeed, Aly H. Akinola, Rachel Jakab, András Bilello, Michel de Verdier, Maria Correia Crivellaro, Priscila Davatzikos, Christos Farahani, Keyvan Freymann, John Hess, Christopher Huang, Raymond Lohmann, Philipp Moassefi, Mana Pease, Matthew W. Vollmuth, Phillipp Sollmann, Nico Diffley, David Nandolia, Khanak K. Warren, Daniel I. Hussain, Ali Fehringer, Pascal Bronstein, Yulia Deptula, Lisa Stein, Evan G. Taherzadeh, Mahsa de Oliveira, Eduardo Portela Haughey, Aoife Kontzialis, Marinos Saba, Luca Turner, Benjamin Brüßeler, Melanie M.T. Ansari, Shehbaz Gkampenis, Athanasios Weiss, David Maximilian Mansour, Aya Shawali, Islam H. Yordanov, Nikolay Stein, Joel M. Hourani, Roula Moshebah, Mohammed Yahya Abouelatta, Ahmed Magdy Rizvi, Tanvir Willms, Klara Martin, Dann C. Okar, Abdullah D'Anna, Gennaro Taha, Ahmed Sharifi, Yasaman Faghani, Shahriar Kite, Dominic Pinho, Marco Haider, Muhammad Ammar Aristizabal, Alejandro Karargyris, Alexandros Kassem, Hasan Pati, Sarthak Sheller, Micah Alonso-Basanta, Michelle Villanueva-Meyer, Javier Rauschecker, Andreas M. Nada, Ayman Aboian, Mariam Flanders, Adam E. Wiestler, Benedikt Bakas, Spyridon Ca Duke University Medical Center Department of Radiation Oncology DurhamNC United States Division of Computational Pathology Department of Pathology Laboratory Medicine Indiana University School of Medicine IndianapolisIN United States Center for Federated Learning in Medicine Indiana University IndianapolisIN United States Department of Neurosurgery Thomas Jefferson University PhiladelphiaPA United States University of California San FranciscoCA United States Yale University New HavenCT United States Department of Radiation Oncology Perelman School of Medicine University of Pennsylvania PhiladelphiaPA United States University of Missouri ColumbiaMO United States Department of Biostatistics and Health Data Science Indiana University School of Medicine IndianapolisIN United States Children's Hospital of Philadelphia University of Pennsylvania PhiladelphiaPA United States University of Pennsylvania PhiladelphiaPA United States Helmholtz AI Helmholtz Munich Germany Department of Informatics Technical University Munich Germany TranslaTUM - Central Institute for Translational Cancer Research Technical University of Munich Germany Department of Diagnostic and Interventional Neuroradiology School of Medicine Klinikum rechts der Isar Technical University of Munich Germany San FranciscoCA United States Biomedical Image Analysis and Machine Learning Department of Quantitative Biomedicine University of Zurich Switzerland Department of Neuroradiology Technical University of Munich Munich Germany University of San Diego CA United States Cornell University IthacaNY United States Department of Radiology Northwestern University EvanstonIL United States Duke University Medical Center School of Medicine DurhamNC United States Lab Crestview Radiology Lagos Nigeria Sage Bionetworks United States McGill University MontrealQC Canada Children's National Hospital WashingtonDC United States George Washington University WashingtonDC United State

We describe the design and results from the BraTS 2023 Intracranial Meningioma Segmentation Challenge. The BraTS Meningioma Challenge differed from prior BraTS Glioma challenges in that it focused on meningiomas, which are typically benign extra-axial tumors with diverse radiologic and anatomical presentation and a propensity for multiplicity. Nine participating teams each developed deep-learning automated segmentation models using image data from the largest multi-institutional systematically expert annotated multilabel multi-sequence meningioma MRI dataset to date, which included 1000 training set cases, 141 validation set cases, and 283 hidden test set cases. Each case included T2, T2/FLAIR, T1, and T1Gd brain MRI sequences with associated tumor compartment labels delineating enhancing tumor, non-enhancing tumor, and surrounding non-enhancing T2/FLAIR hyperintensity. Participant automated segmentation models were evaluated and ranked based on a scoring system evaluating lesion-wise metrics including dice similarity coefficient (DSC) and 95% Hausdorff Distance. The top ranked team had a lesion-wise median dice similarity coefficient (DSC) of 0.976, 0.976, and 0.964 for enhancing tumor, tumor core, and whole tumor, respectively and a corresponding average DSC of 0.899, 0.904, and 0.871, respectively. These results serve as state-of-the-art benchmarks for future pre-operative meningioma automated segmentation algorithms. Additionally, we found that 1286 of 1424 cases (90.3%) had at least 1 compartment voxel abutting the edge of the skull-stripped image edge, which requires further investigation into optimal pre-processing face anonymization steps. © 2024, CC BY.

关键词： Tumors

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Asteroid Measurements at Millimeter Wavelengths with the South Pole Telescope

arXiv

引用

arXiv 2022年

作者： Chichura, P.M. Foster, A. Patel, C. Ossa-Jaen, N. Ade, P.A.R. Ahmed, Z. Anderson, A.J. Archipley, M. Austermann, J.E. Avva, J.S. Balkenhol, L. Barry, P.S. Thakur, R. Basu Beall, J.A. Benabed, K. Bender, A.N. Benson, B.A. Bianchini, F. Bleem, L.E. Bouchet, F.R. Bryant, L. Byrum, K. Carlstrom, J.E. Carter, F.W. Cecil, T.W. Chang, C.L. Chaubal, P. Chen, G. Chiang, H.C. Cho, H.-M. Chou, T.-L. Citron, R. Cliche, J.-F. Crawford, T.M. Crites, A.T. Cukierman, A. Daley, C.M. Denison, E.V. Dibert, K. Ding, J. Dobbs, M.A. Dutcher, D. Everett, W. Feng, C. Ferguson, K.R. Fu, J. Galli, S. Gallicchio, J. Gambrel, A.E. Gardner, R.W. George, E.M. Goeckner-Wald, N. Gualtieri, R. Guns, S. Gupta, N. Guyser, R. de Haan, T. Halverson, N.W. Harke-Hosemann, A.H. Harrington, N.L. Henning, J.W. Hilton, G.C. Hivon, E. Holder, G.P. Holzapfel, W.L. Hood, J.C. Howe, D. Hrubes, J.D. Huang, N. Hubmayr, J. Irwin, K.D. Jeong, O.B. Jonas, M. Jones, A. Khaire, T.S. Knox, L. Kofman, A.M. Korman, M. Kubik, D.L. Kuhlmann, S. Kuo, C.-L. Lee, A.T. Leitch, E.M. Li, D. Lowitz, A. Lu, C. Marrone, D.P. McMahon, J.J. Meyer, S.S. Michalik, D. Millea, M. Mocanu, L.M. Montgomery, J. Moran, C. Corbett Nadolski, A. Natoli, T. Nguyen, H. Nibarger, J.P. Noble, G. Novosad, V. Omori, Y. Padin, S. Pan, Z. Paschos, P. Patil, S. Pearson, J. Phadke, K.A. Posada, C.M. Prabhu, K. Pryke, C. Quan, W. Rahlin, A. Reichardt, C.L. Riebel, D. Riedel, B. Rouble, M. Ruhl, J.E. Saliwanchik, B.R. Sayre, J.T. Schaffer, K.K. Schiappucci, E. Shirokoff, E. Sievers, C. Smecher, G. Sobrin, J.A. Springmann, A. Stark, A.A. Stephen, J. Story, K.T. Suzuki, A. Tandoi, C. Thompson, K.L. Thorne, B. Tucker, C. Umilta, C. Vale, L.R. Veach, T. Vieira, J.D. Wang, G. Whitehorn, N. Wu, W.L.K. Yefremenko, V. Yoon, K.W. Young, M.R. Department of Physics University of Chicago 5640 South Ellis Avenue ChicagoIL60637 United States Kavli Institute for Cosmological Physics University of Chicago 5640 South Ellis Avenue ChicagoIL60637 United States Department of Physics Case Western Reserve University ClevelandOH44106 United States Department of Physics University of Illinois Urbana-Champaign 1110 West Green Street UrbanaIL61801 United States Department of Physics University of Redlands 1267 East Colton Ave RedlandsCA92374 United States School of Physics and Astronomy Cardiff University CardiffCF24 3YB United Kingdom Kavli Institute for Particle Astrophysics and Cosmology Stanford University 452 Lomita Mall StanfordCA94305 United States SLAC National Accelerator Laboratory 2575 Sand Hill Road Menlo ParkCA94025 United States Fermi National Accelerator Laboratory MS209 P.O. Box 500 BataviaIL60510 United States Department of Astronomy University of Illinois at Urbana-Champaign 1002 West Green Street UrbanaIL61801 United States Center for AstroPhysical Surveys National Center for Supercomputing Applications UrbanaIL61801 United States NIST Quantum Devices Group 325 Broadway Mailcode 817.03 BoulderCO80305 United States Department of Physics University of Colorado BoulderCO80309 United States Department of Physics University of California BerkeleyCA94720 United States School of Physics University of Melbourne ParkvilleVIC3010 Australia High-Energy Physics Division Argonne National Laboratory 9700 South Cass Avenue. ArgonneIL60439 United States California Institute of Technology 1200 East California Boulevard. PasadenaCA91125 United States Institut d'Astrophysique de Paris UMR 7095 CNRS Sorbonne Université 98 bis boulevard Arago Paris75014 France Department of Astronomy and Astrophysics University of Chicago 5640 South Ellis Avenue ChicagoIL60637 United States Department of Physics Stanford University 382 Via Pueblo Mall StanfordCA94305 United St

We present the first measurements of asteroids in millimeter wavelength (mm) data from the South Pole Telescope (SPT), which is used primarily to study the cosmic microwave background (CMB). We analyze maps of two ∼ 270 deg2 sky regions near the ecliptic plane, each observed with the SPTpol camera ∼ 100 times over one month. We subtract the mean of all maps of a given field, removing static sky signal, and then average the mean-subtracted maps at known asteroid locations. We detect three asteroids-(324) Bamberga, (13) Egeria, and (22) Kalliope-with signal-to-noise ratios (S/N) of 11.2, 10.4, and 6.1, respectively, at 2.0 mm (150 GHz);we also detect (324) Bamberga with S/N of 4.1 at 3.2 mm (95 GHz). We place constraints on these asteroids' effective emissivities, brightness temperatures, and light curve modulation amplitude. Our flux density measurements of (324) Bamberga and (13) Egeria roughly agree with predictions, while our measurements of (22) Kalliope suggest lower flux, corresponding to effective emissivities of 0.64±0.11 at 2.0 mm and Copyright © 2022, The Authors. All rights reserved.

关键词： Cameras

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