检索结果-内蒙古大学图书馆

arXiv 2017年

作者： Schubotz, Moritz Meuschke, Norman Hepp, Thomas Cohl, Howard S. Gipp, Bela Dept. of Computer and Information Science University of Konstanz Box 76 Konstanz78457 Germany Applied and Computational Mathematics Division National Institute of Standards and Technology GaithersburgMD20899-8910 United States

Mathematical expressions can be represented as a tree consisting of terminal symbols, such as identifiers or numbers (leaf nodes), and functions or operators (non-leaf nodes). Expression trees are an important mechanism for storing and processing mathematical expressions as well as the most frequently used visualization of the structure of mathematical expressions. Typically, researchers and practitioners manually visualize expression trees using general-purpose tools. This approach is laborious, redundant, and error-prone. Manual visualizations represents a user's notion of what the markup of an expression should be, but not necessarily what the actual markup is. This paper presents VMEXT - a free and open source tool to directly visualize expression trees from parallel MathML. VMEXT simultaneously visualizes the presentation elements and the semantic structure of mathematical expressions to enable users to quickly spot deficiencies in the Content MathML markup that does not affect the presentation of the expression. Identifying such discrepancies previously required reading the verbose and complex MathML markup. VMEXT also allows one to visualize similar and identical elements of two expressions. Visualizing expression similarity can support support developers in designing retrieval approaches and enable improved interaction concepts for users of mathematical information retrieval systems. We demonstrate VMEXT's visualizations in two web-based applications. The first application presents the visualizations alone. The second application shows a possible integration of the visualizations in systems for mathematical knowledge management and mathematical information retrieval. The application converts LATEX input to parallel MathML, computes basic similarity measures for mathematical expressions, and visualizes the results using VMEXT. Copyright © 2017, The Authors. All rights reserved.

关键词： Visualization

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Observation of WZγ Production in pp Collisions at s=13 TeV with the ATLAS Detector

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Physical Review Letters 2024年第2期132卷 021802-021802页

作者： G. Aad B. Abbott K. Abeling N. J. Abicht S. H. Abidi A. Aboulhorma H. Abramowicz H. Abreu Y. Abulaiti A. C. Abusleme Hoffman B. S. Acharya C. Adam Bourdarios L. Adamczyk L. Adamek S. V. Addepalli M. J. Addison J. Adelman A. Adiguzel T. Adye A. A. Affolder Y. Afik M. N. Agaras J. Agarwala A. Aggarwal C. Agheorghiesei A. Ahmad F. Ahmadov W. S. Ahmed S. Ahuja X. Ai G. Aielli M. Ait Tamlihat B. Aitbenchikh I. Aizenberg M. Akbiyik T. P. A. Åkesson A. V. Akimov D. Akiyama N. N. Akolkar K. Al Khoury G. L. Alberghi J. Albert P. Albicocco G. L. Albouy S. Alderweireldt M. Aleksa I. N. Aleksandrov C. Alexa T. Alexopoulos A. Alfonsi F. Alfonsi M. Algren M. Alhroob B. Ali H. M. J. Ali S. Ali S. W. Alibocus M. Aliev G. Alimonti W. Alkakhi C. Allaire B. M. M. Allbrooke J. F. Allen C. A. Allendes Flores P. P. Allport A. Aloisio F. Alonso C. Alpigiani M. Alvarez Estevez A. Alvarez Fernandez M. Alves Cardoso M. G. Alviggi M. Aly Y. Amaral Coutinho A. Ambler C. Amelung M. Amerl C. G. Ames D. Amidei S. P. Amor Dos Santos K. R. Amos V. Ananiev C. Anastopoulos T. Andeen J. K. Anders S. Y. Andrean A. Andreazza S. Angelidakis A. Angerami A. V. Anisenkov A. Annovi C. Antel M. T. Anthony E. Antipov M. Antonelli D. J. A. Antrim F. Anulli M. Aoki T. Aoki J. A. Aparisi Pozo M. A. Aparo L. Aperio Bella C. Appelt A. Apyan N. Aranzabal C. Arcangeletti A. T. H. Arce E. Arena J-F. Arguin S. Argyropoulos J.-H. Arling O. Arnaez H. Arnold Z. P. Arrubarrena Tame G. Artoni H. Asada K. Asai S. Asai N. A. Asbah J. Assahsah K. Assamagan R. Astalos S. Atashi R. J. Atkin M. Atkinson N. B. Atlay H. Atmani P. A. Atmasiddha K. Augsten S. Auricchio A. D. Auriol V. A. Austrup G. Avolio K. Axiotis G. Azuelos D. Babal H. Bachacou K. Bachas A. Bachiu F. Backman A. Badea P. Bagnaia M. Bahmani A. J. Bailey V. R. Bailey J. T. Baines L. Baines C. Bakalis O. K. Baker E. Bakos D. Bakshi Gupta R. Balasubramanian E. M. Baldin P. Balek E. Ballabene F. Balli L. M. Baltes W. K. Balunas J. Balz E. Banas M. Bandieramonte A. Bandyopadhyay S. Bansal L. Barak M. Barakat E. L. Bar CPPM Aix-Marseille Université CNRS/IN2P3 Marseille France Homer L. Dodge Department of Physics and Astronomy University of Oklahoma Norman Oklahoma USA II. Physikalisches Institut Georg-August-Universität Göttingen Göttingen Germany Fakultät Physik Technische Universität Dortmund Dortmund Germany Physics Department Brookhaven National Laboratory Upton New York USA Faculté des sciences Université Mohammed V Rabat Morocco Raymond and Beverly Sackler School of Physics and Astronomy Tel Aviv University Tel Aviv Israel Department of Physics Technion Israel Institute of Technology Haifa Israel Department of Physics New York University New York New York USA Departamento de Física Pontificia Universidad Católica de Chile Santiago Chile INFN Gruppo Collegato di Udine Sezione di Trieste Udine Italy ICTP Trieste Italy LAPP Université Savoie Mont Blanc CNRS/IN2P3 Annecy France AGH University of Krakow Faculty of Physics and Applied Computer Science Krakow Poland Department of Physics University of Toronto Toronto Ontario Canada Department of Physics Brandeis University Waltham Massachusetts USA School of Physics and Astronomy University of Manchester Manchester United Kingdom Department of Physics Northern Illinois University DeKalb Illinois USA Department of Physics Istanbul University Istanbul Türkiye Particle Physics Department Rutherford Appleton Laboratory Didcot United Kingdom Santa Cruz Institute for Particle Physics University of California Santa Cruz Santa Cruz California USA CERN Geneva Switzerland Institut de Física d’Altes Energies (IFAE) Barcelona Institute of Science and Technology Barcelona Spain INFN Sezione di Pavia Italy Dipartimento di Fisica Università di Pavia Pavia Italy Institut für Physik Universität Mainz Mainz Germany Department of Physics Alexandru Ioan Cuza University of Iasi Iasi Romania Affiliated with an international laboratory covered by a cooperation agreement with CERN Department of Physics McGill Univer

This Letter reports the observation of WZγ production and a measurement of its cross section using 140.1±1.2 fb−1 of proton-proton collision data recorded at a center-of-mass energy of 13 TeV by the ATLAS detector at the Large Hadron Collider. The WZγ production cross section, with both the W and Z bosons decaying leptonically, pp→WZγ→ℓ′±νℓ+ℓ−γ (ℓ(′)=e, μ), is measured in a fiducial phase-space region defined such that the leptons and the photon have high transverse momentum and the photon is isolated. The cross section is found to be 2.01±0.30(stat)±0.16(syst) fb. The corresponding standard model predicted cross section calculated at next-to-leading order in perturbative quantum chromodynamics and at leading order in the electroweak coupling constant is 1.50±0.06 fb. The observed significance of the WZγ signal is 6.3σ, compared with an expected significance of 5.0σ.

关键词： Hadron-hadron interactions Photon production Weak boson production Hadron colliders

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Small P values may not yield robust findings:an example using REST-meta-PD

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science Bulletin 2021年第21期66卷 2148-2152,M0003页

作者： Xi-Ze Jia Na Zhao Hao-Ming Dong Jia-Wei Sun Marek Barton Roxana Burciu Nicolas Carrière Antonio Cerasa Bo-Yu Chen Jun Chen Stephen Coombes Luc Defebvre Christine Delmaire Kathy Dujardin Fabrizio Esposito Guo-Guang Fan Federica Di Nardo Yi-Xuan Feng Brett W.Fling Saurabh Garg Moran Gilat Martin Gorges Shu-Leong Ho Fay BHorak Xiao Hu Xiao-Fei Hu Biao Huang Pei-Yu Huang Ze-Juan Jia Christina Jones Jan Kassubek Lenka Krajcovicova Ajay Kurani Jing Li Qing Li Ai-Ping Liu Bo Liu Hu Liu Wei-Guo Liu Renaud Lopes Yu-Ting Lou Wei Luo Tara Madhyastha Ni-Ni Mao Grainne McAlonan Martin J.McKeown Shirley Pang Andrea Quattrone Irena Rektorova Alessia Sarica Hui-Fang Shang James M.Shine Priyank Shukla Tomas Slavicek Xiao-Peng Song Gioacchino Tedeschi Alessandro Tessitore David Vaillancourt Jian Wang Jue Wang Z.Jane Wang Lu-Qing Wei Xia Wu Xiao-Jun Xu Lei Yan Jing Yang Wan-Qun Yang Nai-Lin Yao De-Long Zhang Jiu-Quan Zhang Min-Ming Zhang Yan-Ling Zhang Cai-Hong Zhou Chao-Gan Yan Xi-Nian Zuo Mark Hallett Tao Wu Yu-Feng Zang Center for Cognition and Brain Disorders the Affiliated HospitalHangzhou Normal UniversityHangzhou 310015China Zhejiang Key Laboratory for Research in Assessment of Cognitive Impairments Hangzhou 311121China National Basic Science Data Center Beijing 100190China State Key Laboratory of Cognitive Neuroscience and Learning&McGovern Institute for Brain Research Beijing Normal UniversityBeijing 100875China School of Information and Electronics Technology Jiamusi UniversityJiamusi 154007China Neuroscience Program Central European Institute of TechnologyCEITECMasaryk UniversityBrno 62500Czech Republic Department of Applied Physiology and Kinesiology University of FloridaGainesville FL 32611USA Univ.Lille InsermCHU LilleU1172-LilNCog-Lille Neuroscience&CognitionLille F-59000France The Institute for Biomedical Research and Innovation National Research CouncilMangone CS 87050Italy Department of Radiology The First Affiliated Hospital of China Medical UniversityShenyang 110001China Department of Radiology Guangdong Provincial Hospital of Chinese MedicineGuangzhou 510120China Department of Medicine Surgery and DentistryScuola Medica SalernitanaUniversity of SalernoFiscianoSA 132-84084Italy Department of Advanced Medical and Surgery Sciences University of Campania“Luigi Vanvitelli”Caserta 81100Italy Eye Center of the 2nd Affiliated Hospital Medical College of Zhejiang UniversityHangzhou 310020China Zhejiang Provincial Key Lab of Ophthalmology Hangzhou 310020China Department of Health and Exercise Science Colorado State UniversityFort Collins CO 80523USA Pacific Parkinson’s Research Centre University of British ColumbiaVancouver BC V6E 2M6Canada Department of Medicine(Neurology)University of British Columbia Vancouver BC V6T 1B7Canada Brain and Mind Center The University of SydneySydney NSW 2006Australia Department of Neurology Ulm UniversityUlm 89081Germany Division of Neurology Department of MedicineQueen Mary HospitalUniversity of Hong KongHong Kong 999077China Department of

Thousands of resting state functional magnetic resonance imaging(RS-f MRI)articles have been published on brain *** precise localization of abnormal brain activity,a voxel-level comparison is *** of the large number of voxels in the brain,multiple comparison correction(MCC)must be performed to reduce false positive rates,and a smaller P value(usually including either liberal or stringent MCC)is widely recommended[1].

关键词：帕金森病 precise correction

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Multi-resolution large-eddy simulation of an array of hydrokinetic turbines in a field-scale river: The roosevelt island tidal energy project in New York city

arXiv

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arXiv 2018年

作者： Chawdhary, Saurabh Angelidis, Dionysios Colby, Jonathan Corren, Dean Shen, Lian Sotiropoulos, Fotis Mathematics and Computer Science Division Argonne National Laboratory ArgonneIL60439 United States Department of Civil Engineering College of Engineering and Applied Sciences Stony Brook University Stony BrookNY11794 United States Verdant Power Inc The Octagon 888 Main Street New YorkNY10044 United States St. Anthony Falls Laboratory Department of Mechanical Engineering University of Minnesota 2 Third Ave SE MinneapolisMN55414 United States

Marine hydrokinetic (MHK) power generation systems enable harvesting energy from waterways without the need for water impoundment. A major research challenge for numerical simulations of field-scale MHK farms stems from the large disparity in scales between the size of waterway and the energy harvesting device. We propose a large-eddy simulation (LES) framework to perform high-fidelity, multi-resolution simulations of MHK arrays in a real-life marine environment using a novel unstructured Cartesian flow solver coupled with a sharp-interface immersed boundary method. The potential of the method as a powerful engineering design tool is demonstrated by applying it to simulate a 30 turbine MHK array under development in the East River in New York City. A virtual model of the MHK power-plant is reconstructed from high-resolution bathymetry measurements in the East River and the 30 turbines placed in 10 TriFrame arrangements as designed by Verdant Power. A locally refined, near the individual turbines, background unstructured Cartesian grid enables LES across a range of geometric scales of relevance spanning approximately five orders of magnitude. The simulated flow-field is compared with a baseline LES of the flow in the East River without turbines. While velocity deficits and increased levels of turbulence kinetic energy are observed in the vicinity of the turbine wakes, away from the turbines as well as on the water surface only small increase in mean momentum is found. Therefore, our results point to the conclusion that MHK energy harvesting from large rivers is possible without a significant disruption of the river flow. Copyright © 2018, The Authors. All rights reserved.

关键词： Large eddy simulation

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Luminosity determination in pp collisions at TeV using the ATLAS detector at the LHC

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The European Physical Journal C 2023年第10期83卷 1-67页

作者： Aad, G. Abbott, B. Abeling, K. Abidi, S. H. Aboulhorma, A. Abramowicz, H. Abreu, H. Abulaiti, Y. Hoffman, A. C. Abusleme Acharya, B. S. Bourdarios, C. Adam Adamczyk, L. Adamek, L. Addepalli, S. V. Adelman, J. Adiguzel, A. Adorni, S. Adye, T. Affolder, A. A. Afik, Y. Agaras, M. N. Agarwala, J. Aggarwal, A. Agheorghiesei, C. Aguilar-Saavedra, J. A. Ahmad, A. Ahmadov, F. Ahmed, W. S. Ahuja, S. Ai, X. Aielli, G. Tamlihat, M. Ait Aitbenchikh, B. Aizenberg, I. Akbiyik, M. Åkesson, T. P. A. Akimov, A. V. Akolkar, N. N. Khoury, K. Al Alberghi, G. L. Albert, J. Albicocco, P. Alderweireldt, S. Aleksa, M. Aleksandrov, I. N. Alexa, C. Alexopoulos, T. Alfonsi, A. Alfonsi, F. Alhroob, M. Ali, B. Ali, S. Aliev, M. Alimonti, G. Alkakhi, W. Allaire, C. Allbrooke, B. M. M. Flores, C. A. Allendes Allport, P. P. Aloisio, A. Alonso, F. Alpigiani, C. Estevez, M. Alvarez Fernandez, A. Alvarez Alviggi, M. G. Aly, M. Coutinho, Y. Amaral Ambler, A. Amelung, C. Amerl, M. Ames, C. G. Amidei, D. Dos Santos, S. P. Amor Amos, K. R. Ananiev, V. Anastopoulos, C. Andeen, T. Anders, J. K. Andrean, S. Y. Andreazza, A. Angelidakis, S. Angerami, A. Anisenkov, A. V. Annovi, A. Antel, C. Anthony, M. T. Antipov, E. Antonelli, M. Antrim, D. J. A. Anulli, F. Aoki, M. Aoki, T. Pozo, J. A. Aparisi Aparo, M. A. Bella, L. Aperio Appelt, C. Aranzabal, N. Ferraz, V. Araujo Arcangeletti, C. Arce, A. T. H. Arena, E. Arguin, J.-F. Argyropoulos, S. Arling, J.-H. Armbruster, A. J. Arnaez, O. Arnold, H. Tame, Z. P. Arrubarrena Artoni, G. Asada, H. Asai, K. Asai, S. Asbah, N. A. Assahsah, J. Assamagan, K. Astalos, R. Atkin, R. J. Atkinson, M. Atlay, N. B. Atmani, H. Atmasiddha, P. A. Augsten, K. Auricchio, S. Auriol, A. D. Austrup, V. A. Avner, G. Avolio, G. Axiotis, K. Azuelos, G. Babal, D. Bachacou, H. Bachas, K. Bachiu, A. Backman, F. Badea, A. Bagnaia, P. Bahmani, M. Bailey, A. J. Bailey, V. R. Baines, J. T. Bakalis, C. Baker, O. K. Bakos, E. Gupta, D. Bakshi Balasubramanian, R. Baldin, E. M. Balek, P. Ballabene, E. Balli, F. Baltes, L. M. Balunas, W. K. Balz, J. CPPM Aix-Marseille Université CNRS/IN2P3 Marseille France Homer L. Dodge Department of Physics and Astronomy University of Oklahoma Norman USA II. Physikalisches Institut Georg-August-Universität Göttingen Göttingen Germany Physics Department Brookhaven National Laboratory Upton USA Faculté des sciences Université Mohammed V Rabat Morocco Raymond and Beverly Sackler School of Physics and Astronomy Tel Aviv University Tel Aviv Israel Department of Physics Technion Israel Institute of Technology Haifa Israel Department of Physics New York University New York USA Departamento de Física Pontificia Universidad Católica de Chile Santiago Chile INFN Gruppo Collegato di Udine Sezione di Trieste Udine Italy ICTP Trieste Italy Department of Physics King’s College London London UK LAPP Université Savoie Mont Blanc CNRS/IN2P3 Annecy France Faculty of Physics and Applied Computer Science AGH University of Science and Technology Krakow Poland Department of Physics University of Toronto Toronto Canada Department of Physics Brandeis University Waltham USA Department of Physics Northern Illinois University DeKalb USA Department of Physics Istanbul University Istanbul Türkiye Département de Physique Nucléaire et Corpusculaire Université de Genève Geneva Switzerland Particle Physics Department Rutherford Appleton Laboratory Didcot UK Santa Cruz Institute for Particle Physics University of California Santa Cruz Santa Cruz USA CERN Geneva Switzerland Institut de Física d’Altes Energies (IFAE) Barcelona Institute of Science and Technology Barcelona Spain INFN Sezione di Pavia Pavia Italy Dipartimento di Fisica Università di Pavia Pavia Italy Institut für Physik Universität Mainz Mainz Germany Department of Physics Alexandru Ioan Cuza University of Iasi Iasi Romania Departamento de Física Teórica y del Cosmos Universidad de Granada Granada Spain Affiliated with an international laboratory covered by a cooperation agreement with CERN Geneva Switzerland

The luminosity determination for the ATLAS detector at the LHC during Run 2 is presented, with pp collisions at a centre-of-mass energy $$\sqrt{s}=13$$ TeV. The absolute luminosity scale is determined using van der Meer beam separation scans during dedicated running periods in each year, and extrapolated to the physics data-taking regime using complementary measurements from several luminosity-sensitive detectors. The total uncertainties in the integrated luminosity for each individual year of data-taking range from 0.9% to 1.1%, and are partially correlated between years. After standard data-quality selections, the full Run 2 pp data sample corresponds to an integrated luminosity of $$140.1\pm 1.2$$ $$\hbox {fb}^{-1}$$ , i.e. an uncertainty of 0.83%. A dedicated sample of low-pileup data recorded in 2017–2018 for precision Standard Model physics measurements is analysed separately, and has an integrated luminosity of $$338.1\pm 3.1$$ $$\hbox {pb}^{-1}$$ .

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The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics

NPJ Biodiversity

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NPJ Biodiversity 2024年第1期3卷 28页

作者： Mc Cartney, Ann M. Formenti, Giulio Mouton, Alice De Panis, Diego Marins, Luísa S. Leitão, Henrique G. Diedericks, Genevieve Kirangwa, Joseph Morselli, Marco Salces-Ortiz, Judit Escudero, Nuria Iannucci, Alessio Natali, Chiara Svardal, Hannes Fernández, Rosa De Pooter, Tim Joris, Geert Strazisar, Mojca Wood, Jonathan M. D. Herron, Katie E. Seehausen, Ole Watts, Phillip C. Shaw, Felix Davey, Robert P. Minotto, Alice Fernández, José M. Böhne, Astrid Alegria, Carla Alioto, Tyler Alves, Paulo C. Amorim, Isabel R. Aury, Jean-Marc Backstrom, Niclas Baldrian, Petr Baltrunaite, Laima Barta, Endre Bedhom, Bertrand Belser, Caroline Bergsten, Johannes Bertrand, Laurie Bilandija, Helena Binzer-Panchal, Mahesh Bista, Iliana Blaxter, Mark Borges, Paulo A. V. Dias, Guilherme Borges Bosse, Mirte Brown, Tom Bruggmann, Rémy Buena-Atienza, Elena Burgin, Josephine Buzan, Elena Cariani, Alessia Casadei, Nicolas Chiara, Matteo Chozas, Sergio Jr, Fedor Čiampor Crottini, Angelica Cruaud, Corinne Cruz, Fernando Dalen, Love Biase, Alessiode Delcampo, Javier Delic, Teo Dennis, Aliceb. Derks, Martijn F. L. Diroma, Maria Angela Djan, Mihajla Duprat, Simone Eleftheriadi, Klara Feulner, Philine G. D. Flot, Jean-François Forni, Giobbe Fosso, Bruno Fournier, Pascal Fournier-Chambrillon, Christine Gabaldon, Toni Garg, Shilpa Gissi, Carmela Giupponi, Luca Gomez-Garrido, Jessica González, Josefa Grilo, Miguel L. Grüning, Björn Guerin, Thomas Guiglielmoni, Nadege Gut, Marta Haesler, Marcel P. Hahn, Christoph Halpern, Balint Harrison, Peter W. Heintz, Julia Hindrikson, Maris Höglund, Jacob Howe, Kerstin Hughes, Graham M. Istace, Benjamin Cock, Mark J. Janžekovič, Franc Jonsson, Zophonias O. Joye-Dind, Sagane Koskimäki, Janne J. Krystufek, Boris Kubacka, Justyna Kuhl, Heiner Kusza, Szilvia Labadie, Karine Lähteenaro, Meri Lantz, Henrik Lavrinienko, Anton Leclère, Lucas Lopes, Ricardo Jorge Madsen, Ole Magdelenat, Ghislaine Magoga, Giulia Manousaki, Tereza Mappes, Tapio Marques, Joao Pedro Redondo, Gemma I. Martinez Maumus, Florian McCarthy, Shane A. M Genomics Institute University of California SantaCruz CA United States TheVertebrate Genome Laboratory The Rockefeller University NewYork NY United States Department of Biology University of Florence Sesto Fiorentino Italy InBios-Conservation Genetics Laboratory University of Liege Liege Belgium Leibniz Institut für Zoo und Wildtierforschung Berlin Germany Berlin Center for Genomics in Biodiversity Research Berlin Germany Department of Biology University of Antwerp Antwerp Belgium Institute of Zoology University of Cologne Cologne Germany Department of Chemistry Life Sciences and Environmental Sustainability University of Parma Parma Italy Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra Barcelona Spain Naturalis Biodiversity Center Leiden Netherlands Neuromics Support Facility VIB Center for Molecular Neurology VIB Antwerp Belgium Neuromics Support Facility Department of Biomedical SciencesUniversity ofAntwerp Antwerp Belgium Tree of Life WellcomeSanger Institute Cambridge Hinxton United Kingdom School of Biology and Environmental Science University College Dublin Belfield Ireland Aquatic Ecology & Evolution Institute of Ecology & Evolution University of Bern Bern Switzerland Department of Fish Ecology & Evolution Eawag Kastanienbaum Switzerland Department of Biological and Environmental Science University of Jyvaskyla Jyvaskyla Finland The EarlhamInstitute NorwichResearchPark Norwich United Kingdom Digital Science London United Kingdom Barcelona Supercomputing Center Spanish National Bioinformatics Institute ELIXIR Spain Getafe Spain Leibniz Institute for the Analysis of Biodiversity Change Museum Koenig Bonn Bonn Germany CE3C—Centre for Ecology Evolution and Environmental Changes & CHANGE—Global Change and Sustainability Institute Faculdade de Ciências Universidade de Lisboa Campo Grande Lisboa Portugal Centro Nacional de Análisis Genómico (CNAG) Barcelona Spain Universitat de Barcelona (UB) Barcelona Spain CIBIO Cen

A genomic database of all Earth’s eukaryotic species could contribute to many scientific discoveries;however, only a tiny fraction of species have genomic information available. In 2018, scientists across the world united under the Earth BioGenome Project (EBP), aiming to produce a database of highquality reference genomes containing all ~1.5 million recognized eukaryotic species. As the European node of the EBP, the European Reference Genome Atlas (ERGA) sought to implement a new decentralised, equitable and inclusive model for producing reference genomes. For this, ERGA launched a Pilot Project establishing the first distributed reference genome production infrastructure and testing it on 98 eukaryotic species from 33 European countries. Here we outline the infrastructure and explore its effectiveness for scaling high-quality reference genome production, whilst considering equity and inclusion. The outcomes and lessons learned provide a solid foundation for ERGA while offering key learnings to other transnational, national genomic resource projects and the EBP. © The Author(s) 2024, corrected publication 2024.

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Hybrid finite element - Spectral method for the fractional laplacian: Approximation theory and efficient solver

arXiv

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arXiv 2017年

作者： Ainsworth, Mark Glusa, Christian Division of Applied Mathematics Brown University 182 George St ProvidenceRI02912 United States Computer Science and Mathematics Division Oak Ridge National Laboratory Oak RidgeTN37831 United States Center for Computing Research Sandia National Laboratories AlbuquerqueNM87185 United States

A numerical scheme is presented for approximating fractional order Poisson problems in two and three dimensions. The scheme is based on reformulating the original problem posed over Ω on the extruded domain C = Ω × [0,∞) following [7]. The resulting degenerate elliptic integer order PDE is then approximated using a hybrid FEM-spectral scheme. Finite elements are used in the direction parallel to the problem domain , and an appropriate spectral method is used in the extruded direction. The spectral part of the scheme requires that we approximate the true eigenvalues of the integer order Laplacian over . We derive an a priori error estimate which takes account of the error arising from using an approximation in place of the true eigenvalues. We further present a strategy for choosing approximations of the eigenvalues based on Weyl's law and finite element discretizations of the eigenvalue problem. The system of linear algebraic equations arising from the hybrid FEM-spectral scheme is decomposed into blocks which can be solved effectively using standard iterative solvers such as multigrid and conjugate gradient. Numerical examples in two and three dimensions show that the approach is quasi-optimal in terms of *** Codes 65N22, 65N30, 65N38, 65N55 Copyright © 2017, The Authors. All rights reserved.

关键词： Eigenvalues and eigenfunctions

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Search for continuous gravitational waves from 20 accreting millisecond x-ray pulsars in O3 LIGO data

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Physical Review D 2022年第2期105卷 022002-022002页

作者： R. Abbott T. D. Abbott F. Acernese K. Ackley C. Adams N. Adhikari R. X. Adhikari V. B. Adya C. Affeldt D. Agarwal M. Agathos K. Agatsuma N. Aggarwal O. D. Aguiar L. Aiello A. Ain T. Akutsu S. Albanesi A. Allocca P. A. Altin A. Amato C. Anand S. Anand A. Ananyeva S. B. Anderson W. G. Anderson M. Ando T. Andrade N. Andres T. Andrić S. V. Angelova S. Ansoldi J. M. Antelis S. Antier S. Appert Koji Arai Koya Arai Y. Arai S. Araki A. Araya M. C. Araya J. S. Areeda M. Arène N. Aritomi N. Arnaud S. M. Aronson K. G. Arun H. Asada Y. Asali G. Ashton Y. Aso M. Assiduo S. M. Aston P. Astone F. Aubin C. Austin S. Babak F. Badaracco M. K. M. Bader C. Badger S. Bae Y. Bae A. M. Baer S. Bagnasco Y. Bai L. Baiotti J. Baird R. Bajpai M. Ball G. Ballardin S. W. Ballmer A. Balsamo G. Baltus S. Banagiri D. Bankar J. C. Barayoga C. Barbieri B. C. Barish D. Barker P. Barneo F. Barone B. Barr L. Barsotti M. Barsuglia D. Barta J. Bartlett M. A. Barton I. Bartos R. Bassiri A. Basti M. Bawaj J. C. Bayley A. C. Baylor M. Bazzan B. Bécsy V. M. Bedakihale M. Bejger I. Belahcene V. Benedetto D. Beniwal T. F. Bennett J. D. Bentley M. BenYaala F. Bergamin B. K. Berger S. Bernuzzi D. Bersanetti A. Bertolini J. Betzwieser D. Beveridge R. Bhandare U. Bhardwaj D. Bhattacharjee S. Bhaumik I. A. Bilenko G. Billingsley S. Bini R. Birney O. Birnholtz S. Biscans M. Bischi S. Biscoveanu A. Bisht B. Biswas M. Bitossi M.-A. Bizouard J. K. Blackburn C. D. Blair D. G. Blair R. M. Blair F. Bobba N. Bode M. Boer G. Bogaert M. Boldrini L. D. Bonavena F. Bondu E. Bonilla R. Bonnand P. Booker B. A. Boom R. Bork V. Boschi N. Bose S. Bose V. Bossilkov V. Boudart Y. Bouffanais A. Bozzi C. Bradaschia P. R. Brady A. Bramley A. Branch M. Branchesi J. E. Brau M. Breschi T. Briant J. H. Briggs A. Brillet M. Brinkmann P. Brockill A. F. Brooks J. Brooks D. D. Brown S. Brunett G. Bruno R. Bruntz J. Bryant T. Bulik H. J. Bulten A. Buonanno R. Buscicchio D. Buskulic C. Buy R. L. Byer L. Cadonati G. Cagnoli C. Cahillane J. Calderón Bustillo J. D. Callaghan T. A. Callister E. Ca LIGO Laboratory California Institute of Technology Pasadena California 91125 USA Louisiana State University Baton Rouge Louisiana 70803 USA Dipartimento di Farmacia Università di Salerno I-84084 Fisciano Salerno Italy INFN Sezione di Napoli Complesso Universitario di Monte S. Angelo I-80126 Napoli Italy OzGrav School of Physics & Astronomy Monash University Clayton 3800 Victoria Australia LIGO Livingston Observatory Livingston Louisiana 70754 USA University of Wisconsin-Milwaukee Milwaukee Wisconsin 53201 USA OzGrav Australian National University Canberra Australian Capital Territory 0200 Australia Max Planck Institute for Gravitational Physics (Albert Einstein Institute) D-30167 Hannover Germany Leibniz Universität Hannover D-30167 Hannover Germany Inter-University Centre for Astronomy and Astrophysics Pune 411007 India University of Cambridge Cambridge CB2 1TN United Kingdom Theoretisch-Physikalisches Institut Friedrich-Schiller-Universität Jena D-07743 Jena Germany University of Birmingham Birmingham B15 2TT United Kingdom Center for Interdisciplinary Exploration & Research in Astrophysics (CIERA) Northwestern University Evanston Illinois 60208 USA Instituto Nacional de Pesquisas Espaciais 12227-010 São José dos Campos São Paulo Brazil Gravity Exploration Institute Cardiff University Cardiff CF24 3AA United Kingdom INFN Sezione di Pisa I-56127 Pisa Italy Gravitational Wave Science Project National Astronomical Observatory of Japan (NAOJ) Mitaka City Tokyo 181-8588 Japan Advanced Technology Center National Astronomical Observatory of Japan (NAOJ) Mitaka City Tokyo 181-8588 Japan INFN Sezione di Torino I-10125 Torino Italy Università di Napoli “Federico II” Complesso Universitario di Monte S. Angelo I-80126 Napoli Italy Université de Lyon Université Claude Bernard Lyon 1 CNRS Institut Lumière Matière F-69622 Villeurbanne France Department of Physics The University of Tokyo Bunkyo-ku Tokyo 113-0033 Japan Research Center for the Early Un

Results are presented of searches for continuous gravitational waves from 20 accreting millisecond x-ray pulsars with accurately measured spin frequencies and orbital parameters, using data from the third observing run of the Advanced LIGO and Advanced Virgo detectors. The search algorithm uses a hidden Markov model, where the transition probabilities allow the frequency to wander according to an unbiased random walk, while the J-statistic maximum-likelihood matched filter tracks the binary orbital phase. Three narrow subbands are searched for each target, centered on harmonics of the measured spin frequency. The search yields 16 candidates, consistent with a false alarm probability of 30% per subband and target searched. These candidates, along with one candidate from an additional target-of-opportunity search done for SAX J1808.4−3658, which was in outburst during one month of the observing run, cannot be confidently associated with a known noise source. Additional follow-up does not provide convincing evidence that any are a true astrophysical signal. When all candidates are assumed nonastrophysical, upper limits are set on the maximum wave strain detectable at 95% confidence, h095%. The strictest constraint is h095%=4.7×10−26 from IGR J17062−6143. Constraints on the detectable wave strain from each target lead to constraints on neutron star ellipticity and r-mode amplitude, the strictest of which are ε95%=3.1×10−7 and α95%=1.8×10−5 respectively. This analysis is the most comprehensive and sensitive search of continuous gravitational waves from accreting millisecond x-ray pulsars to date.

关键词： Gravitational waves Binary stars Neutron stars & pulsars

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Application of the cut-off projection to solve a backward heat conduction problem in a two-slab composite system

arXiv

引用

arXiv 2017年

作者： Tuan, Nguyen Huy Khoa, Vo Anh Truong, Mai Thanh Nhat Hung, Tran The Minh, Mach Nguyet Institute for Computational Science and Technology Ho Chi Minh city Viet Nam Mathematics and Computer Science Division Gran Sasso Science Institute L'Aquila Italy Institute for Numerical and Applied Mathematics University of Goettingen Germany Department of Electrical Electronic and Control Engineering Hankyong National University Gyeonggi Korea Republic of Department of Mathematics University of Hamburg Hamburg Germany Department of Mathematics and Statistics University of Helsinki Finland

The main goal of this paper is applying the cut-off projection for solving one-dimensional backward heat conduction problem in a two-slab system with a perfect contact. In a constructive manner, we commence by demonstrating the Fourier-based solution that contains the drastic growth due to the high-frequency nature of the Fourier series. Such instability leads to the need of studying the projection method where the cut-off approach is derived consistently. In the theoretical framework, the first two objectives are to construct the regularized problem and prove its stability for each noise level. Our second interest is estimating the error in L2-norm. Another supplementary objective is computing the eigen-elements. All in all, this paper can be considered as a preliminary attempt to solve the heating/cooling of a two-slab composite system backward in time. Several numerical tests are provided to corroborate the qualitative analysis.35K05, 42A20, 47A52, 65J20 Copyright © 2017, The Authors. All rights reserved.

关键词： Heat conduction

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Toward reliable validation of HPC network simulation models 17

Toward reliable validation of HPC network simulation models

引用

Simulation Winter Conference

作者： Misbah Mubarak Nikhil Jain Jens Domke Noah Wolfe Caitlin Ross Kelvin Li Abhinav Bhatele Christopher D. Carothers Kwan-Liu Ma Robert B. Ross Mathematics and Computer Science Division Argonne National Laboratory Lemont IL USA Center for Applied Scientific Computing Lawrence Livermore National Laboratory Livermore CA USA Matsuoka Laboratory Tokyo Institute of Technology Tokyo Japan Computer Science Department Rensselaer Polytechnic Institute Troy NY USA Computer Science Department University of California Davis CA

ISBN: (纸本)9781538634271

While the high performance computing (HPC) community is relying on simulations increasingly to co-design and optimize HPC interconnects, the simulation community lacks a coherent set of practices to be followed when validating the simulators and network models. Validation of HPC network simulation models is a multi-step process starting with the selection of representative communication patterns, configuring the network model, followed by designing the set of experiments, and finally, documenting the outcome for reproducibility. In this paper, we present a set of recommended practices for each of these steps in the validation process. If the recommendations are followed, the end result should be a validated network model that can make reasonably accurate predictions and convince the community about the correctness of the model.

关键词： Benchmark testing Computational modeling Predictive models computer science Network topology Mathematical model Protocols

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