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检索条件"机构=Program of Computational Science and Engineering"
866 条 记 录,以下是151-160 订阅
排序:
Comparing LSTM and BLSTM Deep Neural Networks for Power Consumption Prediction: Preliminary studies
arXiv
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arXiv 2023年
作者: da Silva, Davi Guimarães de Moura Meneses, Anderson Alvarenga Federal University of Western Pará – Graduate Program in Society Nature and Development R. Vera Paz s/n Salé PA SantarémCEP 68.035-110 Brazil Federal Institute of Education Science and Technology of Pará Brazil Federal University of Western Pará Institute of Geosciences and Engineering Laboratory of Computational Intelligence Brazil
Electric consumption prediction methods are investigated for many reasons such as decision-making related to energy efficiency as well as for anticipating demand in the energy market dynamics. The objective of the pre... 详细信息
来源: 评论
Identifying the minimal sets of distance restraints for FRET-assisted protein structural modeling
arXiv
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arXiv 2024年
作者: Liu, Zhuoyi Grigas, Alex T. Sumner, Jacob Knab, Edward Davis, Caitlin M. O’Hern, Corey S. Department of Mechanical Engineering and Materials Science Yale University New HavenCT06520 United States Integrated Graduate Program in Physical and Engineering Biology Yale University New HavenCT06520 United States Graduate Program in Computational Biology and Bioinformatics Yale University New HavenCT06520 United States Department of Chemistry Yale University New HavenCT06520 United States Department of Physics Yale University New HavenCT06520 United States Department of Applied Physics Yale University New HavenCT06520 United States
Proteins naturally occur in crowded cellular environments and interact with other proteins, nucleic acids, and organelles. Since most previous experimental protein structure determination techniques require that prote... 详细信息
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Global dispersal and adaptive evolution of domestic cattle:a genomic perspective
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Stress Biology 2023年 第1期3卷 98-110页
作者: Xiaoting Xia Kaixing Qu Yan Wang Mikkel-Holger SSinding Fuwen Wang Quratulain Hanif Zulfiqar Ahmed Johannes A.Lenstra Jianlin Han Chuzhao Lei Ningbo Chen Key Laboratory of Animal Genetics Breeding and Reproduction of Shaanxi ProvinceCollege of Animal Science and TechnologyNorthwest A&F UniversityYangling 712100China Academy of Science and Technology Chuxiong Normal UniversityChuxiong 675000China Qingdao Municipal Bureau of Agriculture and Rural Affairs Qingdao 266000China Section for Computational and RNA Biology Department of BiologyUniversity of CopenhagenCopenhagen 1350Denmark National Institute for Biotechnology and Genetic Engineering FaisalabadPakistan Faculty of Veterinary and Animal Sciences University of Poonch RawalakotAzad Jammu and Kashmir 12350Pakistan Faculty of Veterinary Medicine Utrecht UniversityUtrechtThe Netherlands Livestock Genetic Program International Livestock Research Institute(ILRI)Nairobi 00100Kenya CAAS-ILRI Joint Laboratory On Livestock and Forage Genetic Resources Institute of Animal ScienceChinese Academy of Agricultural Sciences(CAAS)Beijing 100193China
Domestic cattle have spread across the globe and inhabit variable and unpredictable *** have been exposed to a plethora of selective pressures and have adapted to a variety of local ecological and management condition... 详细信息
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CONVERGENCE SPEED AND APPROXIMATION ACCURACY OF NUMERICAL MCMC
arXiv
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arXiv 2022年
作者: Cui, Tiangang Dong, Jing Jasra, Ajay Tong, Xin T. School of Mathematics Monash University Australia Graduate School of Business Columbia University United States Applied Mathematics and Computational Science Program Computer Electrical Mathematical Sciences and Engineering Division King Abdullah University of Science and Technology Saudi Arabia Department of Mathematics National University of Singapore Singapore
When implementing Markov Chain Monte Carlo (MCMC) algorithms, perturbation caused by numerical errors is sometimes inevitable. This paper studies how perturbation of MCMC affects the convergence speed and Monte Carlo ... 详细信息
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An open-source, automated, and cost-effective platform for COVID-19 diagnosis and rapid portable genomic surveillance using nanopore sequencing
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Scientific Reports 2023年 第1期13卷 1-12页
作者: Ramos-Mandujano, Gerardo Grünberg, Raik Zhang, Yingzi Bi, Chongwei Guzmán-Vega, Francisco J. Shuaib, Muhammad Gorchakov, Rodion V. Xu, Jinna Tehseen, Muhammad Takahashi, Masateru Takahashi, Etsuko Dada, Ashraf Ahmad, Adeel Nazir Hamdan, Samir M. Pain, Arnab Arold, Stefan T. Li, Mo Stem Cell and Regeneration Laboratory Bioscience Program Biological and Environmental Science and Engineering Division (BESE) King Abdullah University of Science and Technology (KAUST) Thuwal 23955-6900 Saudi Arabia Structural Biology and Engineering Computational Biology Research Center. Biological and Environmental Science and Engineering Division (BESE) King Abdullah University of Science and Technology (KAUST) Thuwal 23955-6900 Saudi Arabia Pathogen Genomics Laboratory Bioscience Program Biological and Environmental Science and Engineering (BESE) King Abdullah University of Science and Technology (KAUST) Thuwal 23955-6900 Saudi Arabia Health Safety and Environment Department King Abdullah University of Science and Technology (KAUST) Thuwal 23955-6900 Saudi Arabia Laboratory of DNA Replication and Recombination Bioscience Program Biological and Environmental Science and Engineering Division (BESE) King Abdullah University of Science and Technology (KAUST) Thuwal 23955-6900 Saudi Arabia Department of Pathology and Laboratory Medicine King Faisal Specialist Hospital and Research Center Jeddah Saudi Arabia College of Medicine Al Faisal University Riyadh Saudi Arabia KAUST Health King Abdullah University of Science and Technology (KAUST) Thuwal 23955-6900 Saudi Arabia Bioengineering Program Biological and Environmental Science and Engineering Division (BESE) King Abdullah University of Science and Technology (KAUST) Thuwal 23955-6900 Saudi Arabia
The COVID-19 pandemic, caused by SARS-CoV-2, has emphasized the necessity for scalable diagnostic workflows using locally produced reagents and basic laboratory equipment with minimal dependence on global supply chain...
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BENCHMARKING COMMUNITY DRUG RESPONSE PREDICTION MODELS: DATASETS, MODELS, TOOLS, AND METRICS FOR CROSS-DATASET GENERALIZATION ANALYSIS
arXiv
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arXiv 2025年
作者: Partin, Alexander Vasanthakumari, Priyanka Narykov, Oleksandr Wilke, Andreas Koussa, Natasha Jones, Sara E. Zhu, Yitan Overbeek, Jamie C. Jain, Rajeev Fernando, Gayara Demini Sanchez-Villalobos, Cesar Garcia-Cardona, Cristina Mohd-Yusof, Jamaludin Chia, Nicholas Wozniak, Justin M. Ghosh, Souparno Pal, Ranadip Brettin, Thomas S. Weil, M. Ryan Stevens, Rick L. Division of Data Science and Learning Argonne National Laboratory LemontIL United States Frederick National Laboratory for Cancer Research Cancer Data Science Initiatives Cancer Research Technology Program FrederickMD United States Department of Statistics University of Nebraska–Lincoln LincolnNE United States Department of Electrical & Computer Engineering Texas Tech University LubbockTX United States Division of Computer Computational and Statistical Sciences Los Alamos National Laboratory Los AlamosNM United States Department of Computer Science The University of Chicago ChicagoIL United States
Deep learning (DL) and machine learning (ML) models have shown promise in drug response prediction (DRP), yet their ability to generalize across datasets remains an open question, raising concerns about their real-wor... 详细信息
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The bourque distances for mutation trees of cancers  20
The bourque distances for mutation trees of cancers
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20th International Workshop on Algorithms in Bioinformatics, WABI 2020
作者: Jahn, Katharina Beerenwinkel, Niko Zhang, Louxin Department of Biosystems Science and Engineering ETH Zurich Basel Switzerland SIB Swiss Institute of Bioinformatics Basel Switzerland Department of Mathematics and Computational Biology Program National University of Singapore Singapore
Mutation trees are rooted trees of arbitrary node degree in which each node is labeled with a mutation set. These trees, also referred to as clonal trees, are used in computational oncology to represent the mutational... 详细信息
来源: 评论
TERMinator: A Neural Framework for Structure-Based Protein Design using Tertiary Repeating Motifs
arXiv
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arXiv 2022年
作者: Li, Alex J. Sundar, Vikram Grigoryan, Gevorg Keating, Amy E. Department of Chemistry Massachusetts Institute of Technology United States Computational and Systems Biology Program Massachusetts Institute of Technology United States Department of Computer Science Dartmouth College United States Departments of Biology and Biological Engineering Massachusetts Institute of Technology United States
computational protein design has the potential to deliver novel molecular structures, binders, and catalysts for myriad applications. Recent neural graph-based models that use backbone coordinate-derived features show... 详细信息
来源: 评论
Perturbation theory for evolution of cooperation on networks
arXiv
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arXiv 2022年
作者: Meng, Lingqi Masuda, Naoki Department of Mathematics University at Buffalo State University of New York BuffaloNY14260-2900 United States Computational and Data-Enabled Science and Engineering Program University at Buffalo State University of New York BuffaloNY14260-5030 United States
Network structure is a mechanism for promoting cooperation in social dilemma games. In the present study, we explore graph surgery, i.e., to slightly perturb the given network, towards a network that better fosters co... 详细信息
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Structural properties of hyperuniform Voronoi networks
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Physical Review E 2025年 第3期111卷 034123-034123页
作者: Eli Newby Wenlong Shi Yang Jiao Reka Albert Salvatore Torquato Department of Physics Pennsylvania State University University Park Pennsylvania 16802 USA Materials Science and Engineering Arizona State University Tempe Arizona 85287 USA Department of Physics Arizona State University Tempe Arizona 85287 USA Department of Chemistry Princeton University Princeton New Jersey 08544 USA Department of Physics Princeton University Princeton New Jersey 08544 USA Princeton Institute of Materials Princeton University Princeton New Jersey 08544 USA Program in Applied and Computational Mathematics Princeton University Princeton New Jersey 08544 USA
Disordered hyperuniform many-particle systems are recently discovered exotic states of matter, characterized by the complete suppression of normalized infinite-wavelength density fluctuations, as in perfect crystals, ... 详细信息
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