检索结果-内蒙古大学图书馆

2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023

作者： Guo, Kuo Li, Yifan Chen, Hao Shen, Hong-Bin Yang, Yang Shanghai Jiao Tong University Key Lab. of Shanghai Education Commission for Intelligent Interaction and Cognitive Engineering Department of Computer Science and Engineering Shanghai200240 China Shanghai Jiao Tong University Key Laboratory of System Control and Information Processing Ministry of Education of China Institute of Image Processing and Pattern Recognition Shanghai200240 China Carnegie Mellon University School of Computer Science Computational Biology Department PittsburghPA15213 United States

ISBN: (纸本)9798350337488

Isoforms refer to different mRNA molecules transcribed from the same gene, which can be translated into proteins with varying structures and functions. Predicting the functions of isoforms is an essential topic in bioinformatics as it can provide valuable insights into the intricate mechanisms of gene regulation and biological processes. Conventionally, gene function labels are standardized in Gene Ontology (GO) terms. However, traditional methods for predicting isoform function are largely limited by the absence of isoform-specific labels, sparse annotations, and the vast number of GO terms. To address these issues, we propose HANIso, a deep learning-based method for isoform function prediction. HANIso leverages a pretrained protein language model to extract features from protein sequences. It also integrates heterogeneous information, such as isoform sequence features, GO annotations, and isoform interaction data, using a Heterogeneous Graph Attention Network (HAN). This allows the model to learn the importance of different sources of information and their semantic relationships through the attention mechanism. Our method can predict function labels at both the gene level and isoform level. We conduct experiments on two species datasets, and the results demonstrate that our method outperforms existing methods on both AUROC and AUPRC. HANIso has the potential to overcome the limitations of traditional methods and provide a more accurate and comprehensive understanding of isoform function. © 2023 IEEE.

关键词： alternative splicing gene ontology heterogeneous graph attention network isoform function prediction protein language model

来源：评论

学校读者我要写书评

暂无评论

SliceProp: A Slice-Wise Bidirectional Propagation Model for Interactive 3D Medical Image Segmentation 1

SliceProp: A Slice-Wise Bidirectional Propagation Model for ...

引用

1st IEEE International Conference on Medical Artificial Intelligence, MedAI 2023

作者： Xu, Xin Lu, Wenjing Lei, Jiahao Qiu, Peng Shen, Hong-Bin Yang, Yang Shanghai Jiao Tong University Key Lab. of Shanghai Education Commission for Intelligent Interaction and Cognitive Engineering Department of Computer Science and Engineering Shanghai200240 China Shanghai Ninth People's Hospital Shanghai Jiao Tong University School of Medicine Department of Vascular Surgery China Shanghai Jiao Tong University Institute of Image Processing and Pattern Recognition Key Laboratory of System Control and Information Processing Ministry of Education of China Shanghai200240 China

ISBN: (纸本)9798350358780

Interactive medical image segmentation methods have become increasingly popular in recent years. These methods combine manual labeling and automatic segmentation, reducing the workload of annotation while maintaining high accuracy. However, most current interactive segmentation frameworks are limited to 2D image data, and are not suitable for 3D image data due to the large size and high complexity of 3D data, as well as the challenges posed by information asymmetry and sparse annotation. In this paper, we propose SliceProp, an interactive segmentation framework that implements slice-wise Label Bidirectional Propagation (LBP) for 3D medical image segmentation. SliceProp extends the interactive 2D image segmentation algorithm to 3D image segmentation, and can handle 3D data with large size and high complexity. Moreover, equipped with a Backtracking Feedback Check (BFC) module, SliceProp effectively addresses the issues of information asymmetry and spatial sparse annotation in 3D medical image segmentation. Additionally, we adopt an uncertainty-based criterion to pri-oritize the slices to be refined interactively, which enhances the efficiency of the interaction process by enabling the model to focus on the regions with the most unreliable predictions. SliceProp is evaluated on two datasets and achieves promising results compared to state-of-the-art methods. © 2023 IEEE.

关键词： Medical imaging

来源：评论

学校读者我要写书评

暂无评论

Delineating the Heterogeneity of Alzheimer's Disease and Mild Cognitive Impairment Using Normative Models of Dynamic Brain Functional Networks

引用

Biological Psychiatry 2025年第11期97卷 1034-1044页

作者： Huo, Yanxi Jing, Rixing Li, Peng Chen, Pindong Si, Juanning Liu, Guozhong School of Instrument Science and Opto-Electronics Engineering Beijing Information Science and Technology University Beijing China Peking University Sixth Hospital Peking University Institute of Mental Health NHC Key Laboratory of Mental Health (Peking University) National Clinical Research Center for Mental Disorders (Peking University Sixth Hospital) Chinese Academy of Medical Sciences Research Unit Peking University Beijing China Brainnetome Center & National Laboratory of Pattern Recognition Institute of Automation Chinese Academy of Sciences Beijing China School of Artificial Intelligence Beijing University of Posts and Telecommunications Beijing China

Background: Alzheimer's disease (AD), which has been identified as the most common type of dementia, presents considerable heterogeneity in its clinical manifestations. Early intervention at the stage of mild cognitive impairment (MCI) holds potential in AD prevention. However, characterizing the heterogeneity of neurobiological abnormalities and identifying MCI subtypes pose significant challenges. Methods: We constructed sex-specific normative age models of dynamic brain functional networks and mapped the deviations of the brain characteristics for individuals from multiple datasets, including 295 patients with AD, 441 patients with MCI, and 1160 normal control participants. Then, based on these individual deviation patterns, subtypes for both AD and MCI were identified using the clustering method, and their similarities and differences were comprehensively assessed. Results: Individuals with AD and MCI were clustered into 2 subtypes, and these subtypes exhibited significant differences in their intrinsic brain functional phenotypes and spatial atrophy patterns, as well as in disease progression and cognitive decline trajectories. The subtypes with positive deviations in AD and MCI shared similar deviation patterns, as did those with negative deviations. There was a potential transformation of MCI with negative deviation patterns into AD, and participants with MCI had a more severe cognitive decline rate. Conclusions: In this study, we quantified neurophysiological heterogeneity by analyzing deviation patterns from the dynamic functional connectome normative model and identified disease subtypes of AD and MCI using a comprehensive resting-state functional magnetic resonance imaging multicenter dataset. The findings provide new insights for developing early prevention and personalized treatment strategies for AD. © 2024 Society of Biological Psychiatry

关键词： Alzheimer disease Clustering analysis Dynamic brain functional networks Heterogeneity Mild cognitive impairment Normative model

来源：评论

学校读者我要写书评

暂无评论

Anomaly Handwritten Text Detection for Automatic Descriptive Answer Evaluation 11

Anomaly Handwritten Text Detection for Automatic Descriptive...

引用

11th International Conference on Computing and pattern recognition, ICCPR 2022

作者： Chatterjee, Nilanjana Shivakumara, Palaiahnaakote Pal, Umapada Lu, Tong Lu, Yue Computer Vision and Pattern Recognition Unit Indian Statistical Institute Kolkata India Faculty of Computer Science and Information Technology University of Malaya Kuala Lumpur Malaysia National Key Lab for Novel Software Technology Nanjing University Nanjing China Shanghai Key Laboratory of Multidimensional Information Processing East China Normal University Shanghai China

ISBN: (纸本)9781450397056

Although there are advanced technologies for character recognition, automatic descriptive answer evaluation is an open challenge for the document image analysis community due to large diversified handwritten text and answers to the question. This paper presents a novel method for detecting anomaly handwritten text in the responses written by the students to the questions. The method is proposed based on the fact that when the students are confident in answering questions, the students usually write answers legibly and neatly while they are not confident, they write sloppy writing which may not be easy for the reader to understand. To detect such anomaly handwritten text, we explore a new combination of Fourier transform and deep learning model for detecting edges. This result preserves the structure of handwritten text. For extracting features for classification of anomaly text and normal text, the proposed method studies the behavior of writing style, especially the variation at ascenders and descenders. Therefore, the proposed work draws principal axis which is invariant to rotation, scaling and some extent to distortion for the edge images. With respect to principal axis, the proposed method draws medial axis using uppermost and lowermost points. The distance between the medial axis and principal axis points are considered as feature vector. Further, the feature vector is passed to Artificial Neural Network for classification of anomaly text. The proposed method is evaluated by testing on our own dataset, standard dataset of gender identification (IAM) and handwritten forgery detection dataset (ACPR 2019). The results on different datasets show that the proposed work outperforms the existing methods. © 2022 ACM.

关键词： Students

来源：评论

学校读者我要写书评

暂无评论

Multi-Modal Domain Adaptation Variational Autoencoder for EEG-Based Emotion recognition

引用

IEEE/CAA Journal of Automatica Sinica 2022年第9期9卷 1612-1626页

作者： Yixin Wang Shuang Qiu Dan Li Changde Du Bao-Liang Lu Huiguang He the Research Center for Brain-inspired Intelligence National Laboratory of Pattern RecognitionInstitute of AutomationChinese Academy of ScienceBeijing 100190 the University of Chinese Academy of Sciences Beijing 100049 the Beijing Institute of Control and Electronic Technology Beijing 100038China the School of Mathematics and Information Sciences Yantai UniversityYantai 264003China the Center for Excellence in Brain Science and Intelligence Technology Chinese Academy of ScienceBeijingChina the Department of Computer Science and Engineering Shanghai Jiao Tong UniversityShanghai 200240China

Traditional electroencephalograph(EEG)-based emotion recognition requires a large number of calibration samples to build a model for a specific subject,which restricts the application of the affective brain computer interface(BCI)in *** attempt to use the multi-modal data from the past session to realize emotion recognition in the case of a small amount of calibration *** solve this problem,we propose a multimodal domain adaptive variational autoencoder(MMDA-VAE)method,which learns shared cross-domain latent representations of the multi-modal *** method builds a multi-modal variational autoencoder(MVAE)to project the data of multiple modalities into a common *** adversarial learning and cycle-consistency regularization,our method can reduce the distribution difference of each domain on the shared latent representation layer and realize the transfer of *** experiments are conducted on two public datasets,SEED and SEED-IV,and the results show the superiority of our proposed *** work can effectively improve the performance of emotion recognition with a small amount of labelled multi-modal data.

关键词： Cycle-consistency domain adaptation electroencephalograph(EEG) multi modality variational autoencoder

来源：评论

学校读者我要写书评

暂无评论

Face Forgery Detection Algorithm Based on Improved MobileViT Network

Face Forgery Detection Algorithm Based on Improved MobileViT...

引用

6th International Conference on Intelligent Computing and Signal processing (ICSP)

作者： Tiantian Wang Xiaoqi Lu School of Information Engineering Inner Mongolia University of Science and Technology Baotou China Inner Mongolia Key Laboratory of Pattern Recognition and Intelligent Image Processing Baotou China Institute of Information Engineering Inner Mongolia University of Technology Hohhot China

DeepFakes blur the boundaries between reality and forgery, resulting in the collapse of exiting credit system, causing immeasurable consequences for national security and social order. Through analysis of existing face forgery techniques, it is found that most generation techniques rely on random noise distribution, and global information will be lost after up sampling. Therefore, we propose a deepfake detection algorithm based on improved MobileViT, which uses CNN local space biasing and the global space representation of the Transformer network to learn the local features and global representation of forged faces, respectively. Coordinate attention is introduced to obtain directional perception and position sensitive information, making the model locate synthetic traces of fake faces better and fusion local and global representation more effectively. For the improved generalization of the model, with the GELU activation function to solve the problem of neuron death. Our model achieved 96.2% on FF++(C23) datasets, and 93.7%,94.1%,96.3%,87.9% on DF, F2F, FS, and NT datasets, respectively. Comparing with previous methods, our model has shown detection robustness and better generalization.

关键词：

来源：评论

学校读者我要写书评

暂无评论

Non-Uniform Illumination Attack for Fooling Convolutional Neural Networks

IEEE Transactions on Artificial Intelligence

引用

IEEE Transactions on Artificial Intelligence 2025年

作者： Jain, Akshay Dubey, Shiv Ram Singh, Satish Kumar Santosh, K.C. Chaudhuri, Bidyut Baran Indian Institute of Information Technology Allahabad Computer Vision and Biometrics Lab Department of Information Technology Uttar Pradesh Prayagraj211015 India University of South Dakota AI Research Lab Department of Computer Science VermillionSD57069 United States Indian Statistical Institute Computer Vision and Pattern Recognition Unit Kolkata700108 India

Convolutional Neural Networks (CNNs) have made remarkable strides;however, they remain susceptible to vulnerabilities, particularly to image perturbations that humans can easily recognize. This weakness, often termed as 'attacks,' underscores the limited robustness of CNNs and the need for research into fortifying their resistance against such manipulations. This study introduces a novel Non-Uniform Illumination (NUI) attack technique, where images are subtly altered using varying NUI masks. Extensive experiments are conducted on widely-accepted datasets including CIFAR10, TinyImageNet, CalTech256 and NWPU-RESISC45 focusing on image classification with 12 different NUI masks. The resilience of VGG, ResNet, MobilenetV3-small, InceptionV3 and efficientNet b0 models against NUI attacks are evaluated. Our results show a substantial decline in the CNN models' classification accuracy when subjected to NUI attacks, due to changes in the image pixel value distribution, indicating their vulnerability under non-uniform illumination. To mitigate this, a defense strategy is proposed, including NUI-attacked images, generated through the new NUI transformation, into the training set. The results demonstrate a significant enhancement in CNN model performance when confronted with perturbed images affected by NUI attacks. This strategy seeks to bolster CNN models' resilience against NUI attacks. A comparative study with other attack techniques shows the effectiveness of the NUI attack and defense technique. © 2020 IEEE.

关键词： Convolutional neural networks

来源：评论

学校读者我要写书评

暂无评论

RBP-Former: Joint Prediction of RNA-protein Binding Sites on Full-length RNA Transcripts for Multiple RBPs

RBP-Former: Joint Prediction of RNA-protein Binding Sites on...

引用

IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

作者： Yichong Li Xiaojian Liu Fan Cheng Xiaoyong Pan Yang Yang Department of Computer Science and Engineering Shanghai Jiao Tong University Shanghai China Institute of Image Processing and Pattern Recognition Shanghai Jiao Tong University Shanghai China Key Laboratory of System Control and Information Processing Ministry of Education of China Shanghai China Key Laboratory of Shanghai Education Commission for Intelligent Interaction and Cognitive Engineering Shanghai China

ISBN: (数字)9798350386226

ISBN: (纸本)9798350386233

RNA-binding proteins (RBPs) are essential for gene expression, and the complex RNA-protein interaction mechanisms require analysis of global RNA information. Therefore, accurate prediction of RBP binding sites on full-length RNA transcripts is crucial for understanding these mechanisms and their roles in diseases. While machine learning methods can predict RBP binding to RNA fragments, extending this to full-length transcripts presents challenges due to sequence length and data imbalance. In this paper, we introduce RBP-Former, a binding site joint prediction model designed specifically for full-length RNA transcripts that can be used for multiple RBPs. This model processes information at both coarse and fine-grained levels to fully exploit sequence data and its interactions with multiple RBPs. We develop multi-level imbalance learning strategies, achieving favorable results on imbalanced data. Our method outperforms existing methods in predicting binding sites on full-length RNA transcripts for multiple RBPs, demonstrating its effectiveness in handling imbalanced label and sample distributions.

关键词： Proteins Protein engineering Accuracy RNA Machine learning Predictive models Data models Gene expression Bioinformatics Diseases

来源：评论

学校读者我要写书评

暂无评论

2M3DF: Advancing 3D Industrial Defect Detection with Multi Perspective Multimodal Fusion Network

引用

IEEE Transactions on Circuits and Systems for Video Technology 2025年

作者： Asad, Mujtaba Azeem, Waqar Jiang, He Mustafa, Hafiz Tayyab Yang, Jie Liu, Wei Shanghai Jiao Tong University Institute of Image Processing and Pattern Recognition Department of Automation Shanghai200240 China Lahore Garrison University Department of Software Engineering Lahore54000 Pakistan China University of Mining and Technology School of Information and Control Engineering Jiangsu Xuzhou221116 China Zhejiang Normal University School of Computer Science and Technology Jinhua321004 China

In the context of Industrial Anomaly Detection (IAD), ensuring the quality of manufactured products is critical. Traditional 2D based methods often fail to capture anomalies present in complex 3D shapes. For effective anomaly detection in 3D shapes, it is essential to incorporate global semantic context, local geometric structure, and color information of the object. To fully leverage these features, we propose a network named 2M3DF, that leverages knowledge from multi-view RGB images and corresponding point cloud information for enhanced anomaly detection performance. Our model initially employs pre-trained feature extractors that generate local features from multi-view RGB images and corresponding point clouds. The novel inter-modality feature representation and fusion module first adapts these inter-modality features and then effectively aligns and aggregates these multimodality features on a pixel-to-point basis. To learn the normality from point-wise fused multimodal features, we fit a multivariate Gaussian distribution to model the normal feature distribution. Comprehensive experimental evaluations using the MVTec3D-AD and Eyecandies dataset validate the effectiveness of our propose model and demonstrate significant improvements in comparison to existing state-of-the-art methods. Our model achieves a 96.6% mean I-AUROC while delivering real-time results. © 1991-2012 IEEE.

关键词： Normal distribution

来源：评论

学校读者我要写书评

暂无评论

Spectrally Pure Heralded Single Photons at Telecommunication O-Band from a Custom-Poled KTiPO4 Crystal

Spectrally Pure Heralded Single Photons at Telecommunication...

引用

Optica Quantum 2.0 Conference and Exhibition, Quantum 2.0

作者： Cai, Wu-Hao Jin, Rui-Bo Edamatsu, Keiichi Kaneda, Fumihiro Research Institute of Electrical Communication Tohoku University 2-1-1 Katahira Sendai980-8577 Japan Graduate School of Engineering Tohoku University 6-6 Aramaki Aza Aoba Aoba-ku Sendai980-8579 Japan Hubei Key Laboratory of Optical Information and Pattern Recognition Wuhan Institute of Technology Wuhan430205 China PRESTO Japan Science and Technology Agency Kawaguchi332-0012 Japan

We design a custom periodically poled KTiOPO4 crystal to generate a high spectral purity (99.99%) heralded single photons at the telecom O-band. Our designed source is feasible with currently available pump lasers and... 详细信息

ISBN: (纸本)9781957171272

关键词： Laser pumping Nonlinear optical crystals Photonic entanglement Quantum information Quantum light sources Superconducting nanowire single photon detectors

来源：评论

学校读者我要写书评

暂无评论

建议与咨询留下您的常用邮箱和电话号码，以便我们向您反馈解决方案和替代方法

时间限定

文献类型

馆藏选择

核心期刊

语言

文献类型

帮助

文字说明：

检索规则说明：

检索范例：

分类表

所选分类

限定检索结果

文献类型

馆藏范围

日期分布

学科分类号

主题

机构

作者

语言

请选择保存的检索档案：

请选择收藏分类：

通借通还

建议与咨询 留下您的常用邮箱和电话号码，以便我们向您反馈解决方案和替代方法

时间限定

文献类型

馆藏选择

核心期刊

语言

文献类型

帮助

文字说明：

检索规则说明：

检索范例：

分类表

所选分类

限定检索结果

文献类型

馆藏范围

日期分布

学科分类号

主题

机构

作者

语言

请选择保存的检索档案： 新增检索档案 确定 取消

请选择收藏分类： 新增自定义分类 确定 取消

通借通还

建议与咨询留下您的常用邮箱和电话号码，以便我们向您反馈解决方案和替代方法

请选择保存的检索档案：

请选择收藏分类：