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2024 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2024

作者： Zhang, Che Fan, Yanhao Hu, Xiaowen Qian, Yurong Deng, Lei Xinjiang University School of Software Urumqi China Central South University School of Computer Science and Engineering Changsha China

ISBN: (纸本)9798350386226

Exploring gene-drug associations is a key step in identifying new drug candidates, but traditional experimental methods are often expensive and time-consuming. While Graph Neural Network (GNN)-based models have demonstrated effectiveness in association prediction tasks, they face challenges in the information aggregation process. Existing GNN models either treat all nodes uniformly or rely on simple attention mechanisms to assign weights to neighboring nodes, limiting their capacity to capture complex relationships and improve performance. To address these limitations, we propose a novel adaptive graph diffusion network, ADiffGDA, for gene-drug association prediction. The model begins by randomly initializing embeddings for genes and drugs, which are then updated through neighborhood information aggregation. A key feature of ADiffGDA is the incorporation of a heat kernel, enabling each node to dynamically adjust aggregation weights based on its local structure. This approach allows the model to better capture variations in node types and local neighborhood patterns. Through extensive comparative experiments, we show that ADiffGDA outperforms existing state-of-the-art methods. Furthermore, case studies validate its effectiveness as a predictive tool, offering valuable insights for future biological experiments. The code and datasets for ADiffGDA are freely available at https://***/one-melon/ADiffGDA. © 2024 IEEE.

关键词： Graph neural networks

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Reconstruct and Match: Out-of-Distribution Robustness via Topological Homogeneity 38

Reconstruct and Match: Out-of-Distribution Robustness via To...

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38th Conference on Neural Information Processing Systems, NeurIPS 2024

作者： Chen, Chaoqi Tang, Luyao Huang, Hui College of Computer Science and Software Engineering Shenzhen University China School of Informatics Xiamen University China

Since deep learning models are usually deployed in non-stationary environments, it is imperative to improve their robustness to out-of-distribution (OOD) data. A common approach to mitigate distribution shift is to regularize internal representations or predictors learned from in-distribution (ID) data to be domain invariant. Past studies have primarily learned pairwise invariances, ignoring the intrinsic structure and high-order dependencies of the data. Unlike machines, humans recognize objects by first dividing them into major components and then identifying the topological relation of these components. Motivated by this, we propose Reconstruct and Match (REMA), a general learning framework for object recognition tasks to endow deep models with the capability of capturing the topological homogeneity of objects without human prior knowledge or fine-grained annotations. To identify major components from objects, REMA introduces a selective slot-based reconstruction module to dynamically map dense pixels into a sparse and discrete set of slot vectors in an unsupervised manner. Then, to model high-order dependencies among these components, we propose a hypergraph-based relational reasoning module that models the intricate relations of nodes (slots) with structural constraints. Experiments on standard benchmarks show that REMA outperforms state-of-the-art methods in OOD generalization and test-time adaptation settings. © 2024 Neural information processing systems foundation. All rights reserved.

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A Neural Computing-Based Access Control Protocol for AI-Driven Intelligent Flying Vehicles in Industry 5.0-Assisted Consumer Electronics

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IEEE Transactions on Consumer Electronics 2024年第1期70卷 3573-3581页

作者： Mahmood, Khalid Tariq, Tayyaba Sangaiah, Arun Kumar Ghaffar, Zahid Saleem, Muhammad Asad Shamshad, Salman National Yunlin University of Science and Technology Graduate School of Intelligent Data Science Douliu64002 Taiwan National Yunlin University of Science and Technology Department of Computer Science and Information Engineering Douliu64002 Taiwan National Yunlin University of Science and Technology International Graduate School of AI Douliu64002 Taiwan Lebanese American University Department of Electrical and Computer Engineering Byblos1102 2801 Lebanon University of Electronic Science and Technology of China School of Computer Science and Engineering Sichuan Chengdu611731 China The University of Lahore Department of Software Engineering Lahore54590 Pakistan

The continuous revolution in Artificial Intelligence (AI) has played a significant role in the development of key consumer applications, including Industry 5.0, autonomous decision-making, fault diagnosis, etc. In practice, autonomous and intelligent robots and flying vehicles (i.e., drones) are also becoming the integral part of Industry 5.0. These vehicles are attaining significant importance nowadays because of their applications in consumer electronics. However, there may be numerous privacy issues in such an infrastructure. Nevertheless, neural computing-driven security solutions have played a significant role in overcoming the security and privacy issues of AI-driven intelligent flying vehicles. Motivated by these facts, this article presents a neural computing-based access control protocol for AI-driven flying vehicles to prevent all possible security threats. A detailed security evaluation of the devised protocol is done formally using the extensively recognized Real-Or-Random (ROR) oracle model. Similarly, the informal security analysis ensures the resistance of our scheme against various potential attacks under the assumptions of CK and DY adversarial models. Moreover, detailed performance scrutiny of the devised protocol with various existing schemes shows the robustness and supremacy of our scheme in terms of computation, communication overhead, and security attributes. © 1975-2011 IEEE.

关键词： Authentication

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DTA-Net: Dual-Task Attention Network for Medical Image Segmentation and Classification

DTA-Net: Dual-Task Attention Network for Medical Image Segme...

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2024 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2024

作者： Qi, Haifeng Shen, Siyuan Huang, Zhijian Deng, Lei Xinjiang University School of Software Urumqi China Central South University School of Computer Science and Engineering Changsha China

ISBN: (纸本)9798350386226

Medical image segmentation and classification are fundamental tasks in computer-aided diagnosis, where accurate segmentation plays a key role in identifying disease-related features and regions of interest, thus aiding subsequent classification. In this paper, we propose a novel Dual-Task Attention Network (DTA-Net), which simultaneously generates high-quality segmentation masks and performs image classification by incorporating Electronic Medical Records (EMR). The DTA-Net architecture introduces an innovative Shared Proxy Attention Module (SPAM), which leverages a shared mapping function to effectively encode the attention weights of both queries and keys for spatial and channel attention. This dual attention mechanism facilitates complementary learning and interdependence between spatial and channel features. Notably, the proxy projection mechanism within SPAM significantly reduces the computational complexity of spatial attention to a linear level. We validated our approach on three datasets: MSD Prostate for prostate segmentation, the RICORD dataset for lung segmentation, and the iCTCF COVID-19 dataset for both segmentation and classification tasks. Experimental results demonstrate that the proposed network achieves promising performance across all datasets. The source code is available at: https://***/HaifengQi/DTA-Net. © 2024 IEEE.

关键词： Medical imaging

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Empowering Visible-Infrared Person Re-Identification with Large Foundation Models 38

Empowering Visible-Infrared Person Re-Identification with La...

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38th Conference on Neural Information Processing Systems, NeurIPS 2024

作者： Hu, Zhangyi Yang, Bin Ye, Mang National Engineering Research Center for Multimedia Software School of Computer Science Wuhan University Wuhan China

Visible-Infrared Person Re-identification (VI-ReID) is a challenging cross-modal retrieval task due to significant modality differences, primarily resulting from the absence of color information in the infrared modality. The development of large foundation models like Large Language Models (LLMs) and Vision Language Models (VLMs) motivates us to explore a feasible solution to empower VI-ReID with off-the-shelf large foundation models. To this end, we propose a novel Text-enhanced VI-ReID framework driven by Large Foundation Models (TVI-LFM). The core idea is to enrich the representation of the infrared modality with textual descriptions automatically generated by VLMs. Specifically, we incorporate a pre-trained VLM to extract textual features from texts generated by VLM and augmented by LLM, and incrementally fine-tune the text encoder to minimize the domain gap between generated texts and original visual modalities. Meanwhile, to enhance the infrared modality with extracted textual representations, we leverage modality alignment capabilities of VLMs and VLM-generated feature-level filters. This enables the text model to learn complementary features from the infrared modality, ensuring the semantic structural consistency between the fusion modality and the visible modality. Furthermore, we introduce modality joint learning to align features across all modalities, ensuring that textual features maintain stable semantic representation of overall pedestrian appearance during complementary information learning. Additionally, a modality ensemble retrieval strategy is proposed to leverage complementary strengths of each query modality to improve retrieval effectiveness and robustness. Extensive experiments on three expanded VI-ReID datasets demonstrate that our method significantly improves the retrieval performance, paving the way for the utilization of large foundation models in downstream multi-modal retrieval tasks. © 2024 Neural information processing systems foundat

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Container-Aware Service Function Chains Placement and Optimization in Vehicular Edge Computing 22

Container-Aware Service Function Chains Placement and Optimi...

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22nd IEEE International Symposium on Parallel and Distributed Processing with Applications, ISPA 2024

作者： Zhang, Kaixin Hu, Shihong Qu, Zhihao Ye, Baoliu Hohai University School of Computer Science and Software Engineering China Nanjing University National Key Laboratory for Novel Software Technology China

ISBN: (纸本)9798331509712

In the domain of Vehicular Edge Computing (VEC), this paper addresses the complex problem of Service Function Chain (SFC) placement, which is crucial for the efficient deployment of cloud applications in vehicular environments. Our approach leverages Virtual Network Function (VNF) technology, transitioning network services from traditional hardware to more flexible, container-based edge computing frameworks. The primary objective is to organize these VNFs into functional SFCs, thereby minimizing service delays in VEC systems. SFC placement faces two significant challenges. The first is the sequential dependency among VNFs within an SFC, which adds substantial complexity to container deployment. The second challenge is the cold start delay of VNF containers, a critical issue in scenarios requiring swift response times, which negatively impacts service quality in VEC applications. To address these challenges, we propose a comprehensive model for SFC placement that considers the deployment status of VNF containers, acknowledging the complexity of this NP-hard problem. The core of our contribution is the development of the Single SFC Placement Algorithm (SSPA), a sophisticated, greedy-based approach designed for the effective placement of individual SFCs. We enhance this algorithm by incorporating a Particle Swarm Optimization (PSO) technique, making it capable of efficiently handling the placement of multiple SFCs. Our solution aims to improve edge resource utilization and mitigate startup delays associated with the initial activation of containers, thereby reducing service delays. Extensive experimental evaluations demonstrate that our algorithm achieves a 34.3% average reduction in service delay compared to four baselines and a 5.8% average reduction compared to other container-aware algorithms. © 2024 IEEE.

关键词： service function chain SFC placement vehicle edge computing virtual network function

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LSNSCDA: Unraveling CircRNA-Drug Sensitivity via Local Smoothing Graph Neural Network and Credible Negative Samples

LSNSCDA: Unraveling CircRNA-Drug Sensitivity via Local Smoot...

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2024 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2024

作者： Fan, Ziyu Zhang, Yuanpeng Li, Yahan Zhong, Zeyu Deng, Lei Central South University School of Computer Science and Engineering Changsha China Xinjiang University School of Software Wulumuqi China

ISBN: (纸本)9798350386226

This study investigates the role of circular RNAs (circRNAs) in drug sensitivity, with a focus on their potential to inform personalized medicine. While current methods for identifying circRNA-drug sensitivity associations are resource-intensive, we propose LSNSCDA, a novel prediction algorithm that integrates Local Smoothing Graph Neural Networks (LS-GNN) and Credible Negative Sampling (CNS) to improve prediction accuracy. Our approach overcomes the challenges of fixed-length propagation in graph neural networks and the unreliability of randomly sampled negative instances. Experimental results show that LSNSCDA outperforms existing models, providing more reliable predictions and valuable insights into cancer treatment. Extensive evaluation confirms the effectiveness of each component of our model, while case studies further demonstrate its practical applicability. The source code and dataset are available at https://***/ZiyuFanCSU/LSNSCDA. © 2024 IEEE.

关键词： Graph neural networks

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Enhancing Security and Privacy in Distributed Face Recognition Systems through Blockchain and GAN Technologies

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computers, Materials & Continua 2024年第5期79卷 2609-2623页

作者： Muhammad Ahmad Nawaz Ul Ghani Kun She Muhammad Arslan Rauf Shumaila Khan Javed Ali Khan Eman Abdullah Aldakheel Doaa Sami Khafaga School of Information and Software Engineering University of Electronic Science and Technology of ChinaChengdu611731China Department of Computer Science University of Science&TechnologyBannu28100Pakistan Department of Computer Science University of HertfordshireHatfieldAL109ABUK Department of Computer Sciences College of Computer and Information SciencesPrincess Nourah bint Abdulrahman UniversityRiyadh11671Saudi Arabia

The use of privacy-enhanced facial recognition has increased in response to growing concerns about data securityand privacy in the digital age. This trend is spurred by rising demand for face recognition technology in a varietyof industries, including access control, law enforcement, surveillance, and internet communication. However,the growing usage of face recognition technology has created serious concerns about data monitoring and userprivacy preferences, especially in context-aware systems. In response to these problems, this study provides a novelframework that integrates sophisticated approaches such as Generative Adversarial Networks (GANs), Blockchain,and distributed computing to solve privacy concerns while maintaining exact face recognition. The framework’spainstaking design and execution strive to strike a compromise between precise face recognition and protectingpersonal data integrity in an increasingly interconnected environment. Using cutting-edge tools like Dlib for faceanalysis,Ray Cluster for distributed computing, and Blockchain for decentralized identity verification, the proposedsystem provides scalable and secure facial analysis while protecting user privacy. The study’s contributions includethe creation of a sustainable and scalable solution for privacy-aware face recognition, the implementation of flexibleprivacy computing approaches based on Blockchain networks, and the demonstration of higher performanceover previous methods. Specifically, the proposed StyleGAN model has an outstanding accuracy rate of 93.84%while processing high-resolution images from the CelebA-HQ dataset, beating other evaluated models such asProgressive GAN 90.27%, CycleGAN 89.80%, and MGAN 80.80%. With improvements in accuracy, speed, andprivacy protection, the framework has great promise for practical use in a variety of fields that need face recognitiontechnology. This study paves the way for future research in privacy-enhanced face recognition systems, emphasizingt

关键词： Facial recognition privacy protection blockchain GAN distributed systems

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Privacy-Preserving Multi-Keyword Fuzzy Adjacency Search Strategy for Encrypted Graph in Cloud Environment

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computers, Materials & Continua 2024年第3期78卷 3177-3194页

作者： Bin Wu Xianyi Chen Jinzhou Huang Caicai Zhang Jing Wang Jing Yu Zhiqiang Zhao Zhuolin Mei School of Computer and Big Data Science Jiujiang UniversityJiujiang332005China Jiujiang Key Laboratory of Network and Information Security Jiujiang332005China School of Computer and Software Nanjing University of Information Science&TechnologyNanjing210044China School of Computer Engineering Hubei University of Arts and ScienceXiangyang441053China School of Modern Information Technology Zhejiang Institute of Mechanical and Electrical EngineeringHangzhou310053China Information Center Jiangxi Changjiang Chemical Co.Ltd.Jiujiang332005China School of Mathematics and Computer Science Ningxia Normal UniversityGuyuan756099China

In a cloud environment,outsourced graph data is widely used in companies,enterprises,medical institutions,and so *** owners and users can save costs and improve efficiency by storing large amounts of graph data on cloud *** on cloud platforms usually have some subjective or objective attacks,which make the outsourced graph data in an insecure *** issue of privacy data protection has become an important obstacle to data sharing and *** to query outsourcing graph data safely and effectively has become the focus of *** query is a basic and frequently used operation in graph,and it will effectively promote the query range and query ability if multi-keyword fuzzy search can be supported at the same *** work proposes to protect the privacy information of outsourcing graph data by encryption,mainly studies the problem of multi-keyword fuzzy adjacency query,and puts forward a *** our scheme,we use the Bloom filter and encryption mechanism to build a secure index and query token,and adjacency queries are implemented through indexes and query tokens on the cloud *** proposed scheme is proved by formal analysis,and the performance and effectiveness of the scheme are illustrated by experimental *** research results of this work will provide solid theoretical and technical support for the further popularization and application of encrypted graph data processing technology.

关键词： Privacy-preserving adjacency query multi-keyword fuzzy search encrypted graph

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FCA-based θ-iceberg core decomposition in graphs

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Journal of Ambient Intelligence and Humanized Computing 2024年第2期15卷 1423-1428页

作者： Hao, Fei Xinchang, Khamphaphone Park, Doo-Soon Key Laboratory of Modern Teaching Technology Ministry of Education Xi’an China School of Computer Science Shaanxi Normal University Xi’an710119 China Department of Computer Science and Engineering Soonchunhyang University Asan31538 Korea Republic of Department of Computer Software Engineering Soonchunhyang University Asan31538 Korea Republic of

Complex networking analysis is a powerful technique for understanding both complex networks and big graphs in ubiquitous computing. Particularly, there are several novel metrics, such as k-clique and k-core are proposed in order to study the relative importance of nodes in complex networks. Among of those metrics, k-core analysis is an effective approach for simplifying graphical structure. However, the relation between k and the scale of networks is not explored in most existing literature. Toward this end, this paper formulate a new research problem, θ-Iceberg Core decomposition in graphs, which is able to incorporate a parameter θ (0 © Springer-Verlag GmbH Germany, part of Springer Nature 2017.

关键词： Formal concept analysis

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