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AMHF-TP: Multifunctional therapeutic peptides prediction based on multi-granularity hierarchical features

Quantitative Biology 2025年第01期 44-58页

作者： Shouheng Tuo YanLing Zhu Jiangkun Lin Jiewei Jiang School of Computer Science and Technology Xi'an University of Posts and Telecommunications Shaanxi Key Laboratory of Network Data Analysis and Intelligent Processing Xi'an Key Laboratory of Big Data and Intelligent Computing School of Electronic Engineering Xi'an University of Posts and Telecommunications

Multifunctional therapeutic peptides(MFTP) hold immense potential in diverse therapeutic contexts, yet their prediction and identification remain challenging due to the limitations of traditional methodologies, such as extensive training durations, limited sample sizes, and inadequate generalization capabilities. To address these issues, we present AMHF-TP, an advanced method for MFTP recognition that utilizes attention mechanisms and multi-granularity hierarchical features to enhance performance. The AMHF-TP is composed of four key components: a migration learning module that leverages pretrained models to extract atomic compositional features of MFTP sequences; a convolutional neural network and selfattention module that refine feature extraction from amino acid sequences and their secondary structures; a hypergraph module that constructs a hypergraph for complex similarity representation between MFTP sequences; and a hierarchical feature extraction module that integrates multimodal peptide sequence features. Compared with leading methods,the proposed AMHF-TP demonstrates superior precision, accuracy, and coverage, underscoring its effectiveness and robustness in MFTP recognition. The comparative analysis of separate hierarchical models and the combined model, as well as with five contemporary models, reveals AMHF-TP's exceptional performance and stability in recognition tasks.

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Lightweight LUW-DETR for efficient underwater benthic organism detection

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The Visual computer 2025年 1-16页

作者： Li, Ning Ding, Bocheng Yang, Gaochao Ni, Shiyun Wang, Mingliang School of Computer Science and Artificial Intelligence Aliyun School of Big Data School of Software Changzhou University Changzhou China

With the advancement of marine science research, the study and monitoring of benthic organisms have gained prominence. These organisms, inhabiting the seafloor, play crucial roles in marine ecosystems. However, traditional methods for benthic organism surveys rely heavily on manual operations, which are labor-intensive and prone to errors. Moreover, the complexity of underwater environments poses significant challenges for automated detection algorithms. Current models face issues such as large parameter sizes, high computational demands, and difficulties in detecting small targets and overlapping objects. To address these challenges, we propose LUW-DETR, a lightweight algorithm based on the transformer architecture. LUW-DETR incorporates a high–low-frequency attention mechanism and dynamic group convolution module to significantly improve feature extraction and computational efficiency. Experimental results demonstrate that LUW-DETR achieves competitive performance with an mAP of 83.1% on the URPC 2020 dataset and 63.7% on the Pascal VOC 2007 dataset, while reducing parameters by 28.3% and computational cost by 29.6% compared to baseline models. These results highlight LUW-DETR’s balance between accuracy and efficiency, making it suitable for resource-constrained underwater environments. Our source code is available at: https://***/DingBC/LUWDETR .

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Reversible data hiding scheme using prediction neural network and adaptive modulation mapping

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Multimedia Tools and Applications 2025年第9期84卷 6665-6686页

作者： Chen, Si-Sheng Chang, Chin-Chen Horng, Ji-Hwei School of Big Data and Artificial Intelligence Fujian Polytechnic Normal University Fujian Fuzhou35030 China Department of Information Engineering and Computer Science Feng Chia University Taichung40724 Taiwan Department of Electrical Engineering National Quemoy University Kinmen89250 Taiwan

Prediction error expansion (PEE) is an attractive approach for reversible data hiding (RDH). The key issue for PEE-based RDH is to improve the prediction accuracy and design a better modulation mapping. This paper proposes a novel prediction error modulation (PEM) scheme, which comprises a prediction neural network and a modulation mapping rule generation algorithm. We use the multi-scale feature extraction (MSFE) module and the residual dense networks (RDN) to construct the prediction neural network. In the proposed RDH scheme, the cover image is divided into two parts, the reference pixel set and the cover pixel set, based on the chessboard pattern. The prediction network serves to predict the values of the cover pixel set using the reference pixel set. An optimization model is set up to adaptively determine the optimal modulation mapping for data hiding based on the specific prediction-error histogram and payload constraint. Experimental results show the superiority of the proposed prediction neural network and the optimized modulation mapping compared with related works. © The Author(s), under exclusive licence to Springer science+Business Media, LLC, part of Springer Nature 2024.

关键词： Mapping

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An overview on IRS-enabled sensing and communications for 6G: architectures, fundamental limits, and joint beamforming designs

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science China(Information sciences) 2025年第5期68卷 170-193页

作者： Xianxin SONG Yuan FANG Feng WANG Zixiang REN Xianghao YU Ye ZHANG Fan LIU Jie XU Derrick Wing Kwan NG Rui ZHANG Shuguang CUI School of Science and Engineering (SSE) Shenzhen Future Network of Intelligence Institute (FNii-Shenzhen)and Guangdong Provincial Key Laboratory of Future Networks of Intelligence The Chinese University of Hong Kong Department of Electrical Engineering City University of Hong Kong School of Information Engineering Guangdong University of Technology Key Laboratory of Wireless-Optical Communications Chinese Academy of Sciences School of Information Science and Technology University of Science and Technology of China Computer School Beijing Information Science and Technology University National Mobile Communications Research Laboratory School of Information Science and Engineering Southeast University School of Electrical Engineering and Telecommunications University of New South Wales School of Science and Engineering Shenzhen Research Institute of Big Data The Chinese University of Hong Kong Department of Electrical and Computer Engineering National University of Singapore

This study presents an overview on intelligent reflecting surface(IRS)-enabled sensing and communication for the forthcoming sixth-generation(6G) wireless networks, in which IRSs are strategically deployed to proactively reconfigure wireless environments to improve both sensing and communication(S&C) performance. First, we exploit a single IRS to enable wireless sensing in the base station's(BS's) non-line-of-sight(NLoS) area. In particular, we present three IRS-enabled NLoS target sensing architectures with fully-passive, semi-passive, and active IRSs, respectively. We compare their pros and cons by analyzing the fundamental sensing performance limits for target detection and parameter estimation. Next, we consider a single IRS to facilitate integrated sensing and communication(ISAC), in which the transmit signals at the BS are used for achieving both S&C functionalities, aided by the IRS through reflective beamforming. We present joint transmit signal and receiver processing designs for realizing efficient ISAC, and jointly optimize the transmit beamforming at the BS and reflective beamforming at the IRS to balance the fundamental performance tradeoff between S&C. Furthermore, we discuss multi-IRS networked ISAC, by particularly focusing on multi-IRS-enabled multi-link ISAC, multi-region ISAC, and ISAC signal routing, respectively. Finally, we highlight various promising research topics in this area to motivate future work.

关键词： integrated sensing and communication (ISAC) intelligent reflecting surface (IRS) non-line-of-sight (NLoS) sensing sensing and communication tradeoff

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Edge Coalition Construction Based on a Novel Market Equilibrium Price

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China Communications 2025年第3期22卷 288-305页

作者： Wang Xiaolong Dang Jianwu Zhao Shuxu Wang Yangping Zhang Zhanping Hao Zhanjun School of Electronic and Information Engineering Lanzhou Jiaotong UniversityLanzhou 730070China Big Data Center of Gansu Province Lanzhou 730000China School of Mathematics and Information Engineering Longdong UniversityLanzhou 745000China College of Computer Science and Engineering Northwest Normal UniversityLanzhou 730070China

The emergence of multi-access edge computing(MEC)aims at extending cloud computing capabilities to the edge of the radio access *** the large-scale internet of things(IoT)services are rapidly growing,a single edge infrastructure provider(EIP)may not be sufficient to handle the data traffic generated by these *** of the existing work addressed the computing resource shortage problem by optimizing tasks schedule,whereas others overcome such issue by placing computing resources on ***,when considering a multiple EIPs scenario,an urgent challenge is how to generate a coalition structure to maximize each EIP’s gain with a suitable price for computing resource block corresponding to a *** this end,we design a scheme of EIPs collaboration with a market price for containers under a scenario that considers a collection of service providers(SPs)with different budgets and several EIPs distributed in geographical ***,we bring in the net profit market price model to generate a more reasonable equilibrium price and select the optimal EIPs for each SP by a convex *** we use a mathematical model to maximize EIP’s profits and form stable coalitions between EIPs by a distributed coalition formation *** results demonstrate that our proposed collaborative scheme among EIPs enhances EIPs’gain and increases users’surplus.

关键词： coalition formation computing resource block market equilibrium multi-access edge computing surplus

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Selecting Central and Divergent Samples via Leading Tree Metric Space for Semisupervised Learning

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IEEE Transactions on Fuzzy Systems 2025年第5期33卷 1578-1591页

作者： Xu, Ji Ren, Gang Tang, Jianhang Ding, Weiping Wang, Guoyin Guizhou University State Key Laboratory of Public Big Data Guiyang550025 China Nantong University School of Artificial Intelligence and Computer Science Nantong226019 China City University of Macau Faculty of Data Science 999078 China Chongqing Normal University Chongqing400065 China Chongqing University of Posts and Telecommunications Chongqing Key Laboratory of Computational Intelligence Chongqing400065 China

The distribution of the labeled data can greatly affect the performance of a semisupervised learning (SSL) model. Most existing SSL models select the labeled data randomly and equally allocate the labeling quota among the classes, leading to considerable unstableness and degeneration of performance. This study unsupervisedly constructs a leading forest that forms another metric space, based on which it is convenient to define the fuzzy membership function to characterize central and divergent samples and select both types with fuzzy Xor logic. The labeling quota can, thus, be allocated adaptively among different classes. The proposed determinate labeling strategy can generally improve the performance for most SSLs. Especially, when combined with the kernelized large margin component analysis, it produces a novel semisupervised classification model. In addition, the multimodal issue in SSL is effectively addressed by the multigranular structure of leading forest that readily facilitates multiple local metrics learning. Extensive experimental results demonstrate that the proposed method achieved competitive efficiency and encouraging accuracy when compared with the state-of-the-art methods. © 1993-2012 IEEE.

关键词： Self-supervised learning

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MetaHG: Enhancing HGNN Systems Leveraging Advanced Metapath Graph Abstraction 25

MetaHG: Enhancing HGNN Systems Leveraging Advanced Metapath ...

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20th European Conference on computer Systems, EuroSys 2025, co-located 30th ACM International Conference on Architectural Support for Programming Languages and Operating Systems, ASPLOS 2025

作者： He, Haiheng Liu, Haifeng Zheng, Long Huang, Yu Shen, Xinyang Huang, Wenkan Cao, Chuaihu Liao, Xiaofei Jin, Hai Xue, Jingling National Engineering Research Center for Big Data Technology and System Services Computing Technology and System Lab Cluster and Grid Computing Lab School of Computer Science and Technology Huazhong University of Science and Technology Wuhan China School of Computer Science and Engineering University of New South Wales Australia

ISBN: (纸本)9798400711961

Heterogeneous Graph Neural Networks (HGNNs) are pivotal for extracting semantic and structural information from heterogeneous graphs. Traditional HGNN implementations often grapple with the challenges of excessive metapath instances, requiring substantial storage or incurring high instance-matching overhead. These methods typically suffer from redundant instance encoding and costly semantic graph construction. Addressing these issues, we introduce an advanced Metapath Graph (MG) abstraction that encapsulates the structural information of all metapath instances within a compact representation. This approach significantly reduces storage demands, eliminates redundant instance encodings, and foregoes the need for constructing semantic graphs, thereby facilitating rapid HGNN inference. Our software-based system, MetaHG, leverages layerwise encoding and aggregation to avoid redundancies without the necessity of semantic graphs. It incorporates a fast, lightweight partitioning method to efficiently manage large graphs. Distinctively, MetaHG seamlessly integrates with both dynamic HGNNs and homogeneous GNNs, unlike conventional systems. Comparative evaluations demonstrate that MetaHG surpasses the state-of-the-art BFS- and DFS-based HGNN systems, MAGNN and the software implementation of MetaNMP, by 42.5× and 4.53×, respectively, on average. © 2025 Copyright held by the owner/author(s).

关键词： Encoding (symbols)

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An Intrusion Detection Scheme Based on Sequential Tri-Way Decisions of Multiple Granularity for Intelligent Connected Vehicles

An Intrusion Detection Scheme Based on Sequential Tri-Way De...

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International Conference on Artificial Intelligence and Autonomous Transportation, AIAT 2024

作者： Li, Yongzhong Wang, Qi Li, Yuheng Zhang, Shipeng School of Automotive Engineering Nantong Institute of Technology Nantong226010 China Internet of Things and Big Data Major of Macao Polytechnic University Macao China School of Computer Science Jiangsu University of Science and Technology Zhenjiang212003 China

ISBN: (纸本)9789819639762

With the rapid developing technology of the Internet of Things, intelligent connected vehicles are facing more and more serious cybersecurity threats and challenges. With the developing of cybersecurity technology for intelligent connected vehicles it has posed a comprehensive challenge to the existing cybersecurity technologies. Intrusion detection is an important research field of cybersecurity. An intrusion detection scheme based on sequential tri-way decisions of multiple granularities (S3WD-MG) is proposed for Intelligent Connected Vehicles. The S3WD-MG method obtains feature sets of multi-granularities through the auto-encoder of deep learning. This method combines multiple granularities and sequential tri-way decisions to make decisions by the most appropriate for network behavior through by the decision threshold. The experiment results on NSL-KDD show that S3WD-MG method does have a good performance in intrusion detection. Compared with other models, our proposed S3WD-MG method has a higher detection’s rate and the robustness of algorithm is stronger. © Beijing Paike Culture Commu. Co., Ltd. 2025.

关键词： Network intrusion

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AegonKV: A High Bandwidth, Low Tail Latency, and Low Storage Cost KV-Separated LSM Store with SmartSSD-based GC Offloading 23

AegonKV: A High Bandwidth, Low Tail Latency, and Low Storage...

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23rd USENIX Conference on File and Storage Technologies, FAST 2025

作者： Duan, Zhuohui Feng, Hao Liu, Haikun Liao, Xiaofei Jin, Hai Li, Bangyu National Engineering Research Center for Big Data Technology and System Service Computing Technology and System Lab/Cluster and Grid Computing Lab School of Computer Science and Technology Huazhong University of Science and Technology China

ISBN: (纸本)9781939133458

The key-value separation is renowned for its significant mitigation of the write amplification inherent in traditional LSM trees. However, KV separation potentially increases performance overhead in the management of Value region, especially for garbage collection (GC) operation that is used to reduce the redundant space occupation. In response, many efforts have been made to optimize the GC mechanism for KV separation. However, our analysis indicates that such solution based on trade-offs between CPU and I/O overheads cannot simultaneously satisfy the three requirements of KV separated systems in terms of throughput, tail latency, and space usage. This limitation hinders their real-world application. In this paper, we introduce AegonKV, a "three-birds-one-stone" solution that comprehensively enhances the throughput, tail latency, and space usage of KV separated systems. AegonKV first proposes a SmartSSD-based GC offloading mechanism to enable asynchronous GC operations without competing with LSM read/write for bandwidth or CPU. AegonKV leverages offload-friendly data structures and hardware/software execution logic to address the challenges of GC offloading. Experiments demonstrate that AegonKV achieves the largest throughput improvement of 1.28-3.3 times, a significant reduction of 37%-66% in tail latency, and 15%-85% in space overhead compared to existing KV separated systems. © 2025 FAST. All Rights Reserved.

关键词： Digital storage

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Multi-Metric Based Client Selection for Backdoor Defense in Federated Learning 1

Multi-Metric Based Client Selection for Backdoor Defense in ...

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1st International Conference on Intelligent Manufacturing and Cloud Computing, ICIMCC 2024

作者： Yuan, Changjiang Li, Yidong Chen, Naiyue Zhang, Zikai Key Laboratory of Big Data & Artificial Intelligence in Transportation Beijing Jiaotong University Ministry of Education China School of Computer Science and Technology Beijing Jiaotong University Beijing100044 China

ISBN: (纸本)9781643685779

The distributed nature of federated learning makes it highly susceptible to backdoor attacks, which aim to induce the model to produce incorrect results when specific data is input. Existing defense methods based on distance calculations mostly use one single distance, which can be easily circumvented by backdoor attacks. Therefore, we conducted research on the combination of multiple distances. Based on this, we propose a backdoor defense algorithm based on multi metrics, which evaluates models through distance calculation and normalization to select benign models for aggregation. To verify the effectiveness of our method, we conducted experiments on three datasets, and the results prove that our method can provide good defense without reducing the model's main task accuracy. © 2025 The Authors.

关键词： Federated learning

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