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Controlled terminology for clinically-relevant indexing and selective retrieval of biomedical images

International Journal on Digital Libraries 2014年第3期1卷 278-287页

作者： Bidgood Jr., W. Dean Korman, Louis Y. Golichowski, Alan M. Hildebrand, P. Lloyd Mori, Angelo Rossi Bray, Bruce Brown, Nicholas J. G. Spackman, Kent A. Dove, S. Brent Schoeffler, Katherine Duke University Medical Center Center for Healthcare Informatics Durham NC USA Cognitive Science Branch Lister Hill National Center for Biomedical Communication US National Library of Medicine US Department of Medicine Division of Gastroenterology Washington VA Medical Center Washington DC USA US Department of Obstetrics and Gynecology Indiana University School of Medicine Indianapolis IN USA IN Department of Ophthalmology Associate Director of Telemedicine University of Oklahoma Health Sciences Center Oklahoma City OK USA US Istituto Tecnologie Biomediche CNR Rome Italy IT Department of Medicine Division of Cardiology University of Utah Salt Lake City UT USA US Department of Nuclear Medicine Kings College Hospital London UK GB Department of Pathology Oregon Health Sciences University Portland OR USA US Division Chief of Diagnostic Sciences School of Dentistry University of Texas Health Science Center Austin TX USA US Duke/UNC Program in Medical Informatics Duke University Durham NC USA US

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Exploring genomes with a game engine

Exploring genomes with a game engine

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IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

作者： Jeremiah J. Shepherd Lingxi Zhou Yan Zhang Jim Zheng Jijun Tang School of Computer Science and Engineering University of South Caraolina Columbia South Carolina School of Biomedical Informatics The University of Texas Health Science Center at Houston Houston Texas Tianjin Key Laboratory of Cognitive Computing and Application Tianjin University Tianjin China

Studying genomes continues to be beneficial for evolutionary discover, and prognosticating/diagnosing many genetic disorders and diseases. Most of the these studies have used systems that view the DNA in a linear structure, but having this information is only a small part of fully understanding what they can reveal. Visualizing genomes in real time 3D can give researchers more insight, but this is fraught with hardware limitations. Each element contains vast amounts of information that cannot be processed at once. However, by using a game engine and sophisticated video game visualization techniques, we were able to construct a multi-platform real-time 3D genome viewer.

关键词： Genomics Games Engines Biological cells Octrees Three-dimensional displays Data visualization

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ASIS&T annual meeting pre-conference activities: Information behavior on the move: 2013 ASIS&T SIG/USE research symposium

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Bulletin of the Association for Information science and Technology 2014年第3期40卷

作者： Denise E. Agosto Lorri Mon Rong Tang Associate Professor College of Computing & Informatics Drexel University and editor of the Journal of Research on Libraries & Young Adults Associate Professor and Chair The MS-IT program in the Florida State University College of Communication and Information Associate Professor and Director Simmons Usability Lab in the Graduate School of Library and Information Science Simmons College

EDITOR'S SUMMARY The 13th Annual SIG/USE Research Symposium focused on ways mobile technologies have influenced information needs, seeking and use. In her keynote address, Caroline Haythornthwaite framed movement as changing contributorship, interactions and participation in multiple knowledge communities. A series of Ignite talks on the common theme of mobility followed, with topics ranging from mobile phones as the preferred Internet access device, credibility of mobile applications and online resources and public libraries' use of social media and mobile applications to mobile apps promoting health information literacy and supporting teleworking. Small groups brainstormed on opportunities, challenges and research ideas inspired by the theme. Annual SIG/USE awards recognized scholars for innovative work on topics including refugees' information seeking, factors influencing scholars' data sharing and drawings as visual representations of information. The symposium closed with encouragement to consider how information on the move influences perspectives and research into information behavior.

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Erratum to: Methods for evaluating medical tests and biomarkers

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Diagnostic and prognostic research 2017年第1期1卷 11页

作者： Gowri Gopalakrishna Miranda Langendam Rob Scholten Patrick Bossuyt Mariska Leeflang Anna Noel-Storr James Thomas Iain Marshall Byron Wallace Penny Whiting Clare Davenport Gowri GopalaKrishna Isabel de Salis Sue Mallett Robert Wolff Richard Riley Marie Westwood Jos Kleinen Gary Collins Hans Reitsma Karel Moons Antonia Zapf Annika Hoyer Katharina Kramer Oliver Kuss J Ensor J J Deeks E C Martin R D Riley Gerta Rücker Susanne Steinhauser Martin Schumacher Joie Ensor Kym Snell Brian Willis Thomas Debray Jon Deeks Lavinia Ferrante di Ruffano Sian Taylor-Phillips Chris Hyde Stuart A Taylor Gauraang Batnagar Lavinia Ferrante Di Ruffano Farah Seedat Aileen Clarke Sarah Byron Frances Nixon Rebecca Albrow Thomas Walker Carla Deakin Zhivko Zhelev Harriet Hunt Yaling Yang Lucy Abel James Buchanan Thomas Fanshawe Bethany Shinkins Laure Wynants Jan Verbakel Sabine Van Huffel Dirk Timmerman Ben Van Calster Aeliko Zwinderman Jason Oke Jack O'Sullivan Rafael Perera Brian Nicholson Hannah L Bromley Tracy E Roberts Adele Francis Denniis Petrie G Bruce Mann Kinga Malottki Holly Smith Lucinda Billingham Alice Sitch Oke Gerke Mie Holm-Vilstrup Eivind Antonsen Segtnan Ulrich Halekoh Poul Flemming Høilund-Carlsen Bernard G Francq Jac Dinnes Julie Parkes Walter Gregory Jenny Hewison Doug Altman William Rosenberg Peter Selby Julien Asselineau Paul Perez Aïssatou Paye Emilie Bessede Cécile Proust-Lima Christiana Naaktgeboren Joris de Groot Anne Rutjes Johannes Reitsma Emmanuel Ogundimu Jonathan Cook Yannick Le Manach Yvonne Vergouwe Romin Pajouheshnia Rolf Groenwold Karen Moons Linda Peelen Daan Nieboer Bavo De Cock Micael J Pencina Ewout W Steyerberg Jennifer Cooper Nick Parsons Chris Stinton Steve Smith Andy Dickens Rachel Jordan Alexandra Enocson David Fitzmaurice Peymane Adab Charles Boachie Gaj Vidmar Karoline Freeman Martin Connock Rachel Court Carl Moons Jessica Harris Andrew Mumford Zoe Plummer Kurtis Lee Barnaby Reeves Chris Rogers Veerle Verheyden Gianni D Angelini Gavin J Murphy Jeremy Huddy Melody Ni Katherine Good Graham Cooke 1Department of Clinical Epidemiology Biostatistics & Bioinformatics Academic Medical Center University of Amsterdam Amsterdam The Netherlands. 2Cochrane Netherlands Julius Center for Health Sciences and Primary Care University Medical Center Utrecht Utrecht Netherlands. 234Department of Clinical Epidemiology Biostatistics & Bioinformatics Academic Medical Center University of Amsterdam Amsterdam The Netherlands. 49Department of Clinical Epidemiology Biostatistics & Bioinformatics Academic Medical Center University of Amsterdam Amsterdam The Netherlands. 3Cochrane Dementia and Cognitive Improvement Group University of Oxford Oxford UK. 4EPPI-Centre Department of Social Science University College London London UK. 5Division of Health and Social Care Research King's College London London UK. 6College of Computer and Information Science Northeastern University Boston USA. 13University Hospitals Bristol NHS Foundation Trust School of Social and Community Medicine Bristol UK. 275Institute of Applied Health Research University of Birmingham Birmingham UK. 9Department of Clinical Epidemiology Biostatistics & Bioinformatics Academic Medical Center University of Amsterdam Amsterdam The Netherlands. 10School of Social and Community Medicine University of Bristol Bristol UK. 179Institute of Applied Health Research University of Birmingham Birmingham UK. 12Kleijnen Systematic Reviews Ltd York UK. 25Research Institute for Primary Care and Health Sciences Keele University Keele UK. 188Centre for Statistics in Medicine Nuffield Department of Orthopaedics Rheumatology and Musculoskeletal Sciences University of Oxford Oxford UK. 191Julius Center for Health Sciences and Primary Care University Medical Center Utrecht 3584 CG Utrecht Netherlands. 237Julius Center for Health Sciences and Primary Care University Medical Center Utrecht 3584 CG Utrecht Netherlands. 18Department of Medical Statistics University Medical Center Göttingen Göttingen Germany. 19Institute for B

[This corrects the article DOI: 10.1186/s41512-016-0001-y.].

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Indoor scene knowledge acquisition using a natural language interface

Indoor scene knowledge acquisition using a natural language ...

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Workshop on Spatial Knowledge Acquisition with Limited Information Displays 2012, SKALID 2012

作者： Kesavan, Saranya Giudice, Nicholas A. School of Computing and Information Science Spatial Informatics Program University of Maine United States

This paper proposes an interface that uses automatically-generated Natural Language (NL) descriptions to describe indoor scenes based on photos taken of that scene from smartphones or other portable camera-equipped mobile devices. The goal is to develop a non-visual interface based on spatio-linguistic descriptions which could assist blind people in knowing the contents of an indoor scene (e.g., room structure, furniture, landmarks, etc.) and supporting efficient navigation of this space based on these descriptions. In this paper, we concentrate on understanding the most salient content of a stereotypic indoor scene that is described by an observer, categorizing the description strategies employed in this process, and evaluating the best presentation of directional information using NL descriptions in order to support the most accurate spatial behaviors and mental representations of these scenes by means of human behavioral experiments. This knowledge will then be used to develop a domain specific indoor scene ontology, which in turn will be used to generate automated NL descriptions of indoor scenes based on their photographs, which will finally be integrated into a real-time non-visual scene description system.

关键词： Ontology

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Proceedings of the 3rd IPLeiria's International Health Congress Abstracts

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BMC HEALTH SERVICES RESEARCH 2016年第3期16卷 111-242页

作者： [Anonymous] Health Sciences Research Unit: Nursing Collegue of College of Health Technology of Coimbra Coimbra Portugal Sisters Hospitallers of the Sacred Heart of Jesus Casa de Saúde Rainha Santa Isabel Coimbra Portugal Research Unit for Sport and Physical Activity Faculty of Sport Sciences and Physical Education University of Coimbra Coimbra Portugal Complementary Sciences- INESCC Coimbra Portugal CUF Hospitals Lisbon Portugal Breast Unit Champalimaud Clinical Center Lisbon Portugal Swiss Centre for Medical Simulation & Swiss Association of Simulation in Healthcare Basel Switzerland Basel University Hospital Basel Switzerland HELPO Association Cascais Portugal Centro de Linguística Universidade de Lisboa Lisboa Portugal Centro Superior de Estudios Universitarios La Salle Madrid Spain Universidade da Madeira Funchal Portugal Serviço de Saúde da Região Autónoma da Madeira E.P.E. Funchal Portugal Escola Superior de Enfermagem de Lisboa Lisboa Portugal Instituto Superior Miguel Torga Coimbra Portugal Centro de Investigação do Núcleo de Estudos e Intervenção Cognitivo Comportamental Universidade de Coimbra Coimbra Portugal Escola Superior de Saúde de Leiria & Unidade de Investigação em Saúde Instituto Politécnico de Leiria Leiria Portugal National School of Public Health & Centro de Investigação em Saúde Pública Universidade Nova de Lisboa Lisboa Portugal Agrarian Superior School Polytechnic Institute of Viseu Viseu Portugal Laboratory of Microbiology Department of Biological Sciences Faculty of Pharmacy University of Porto Porto Portugal Unit for Multidisciplinary Biomedical Research Institute of Biomedical Sciences Abel Salazar University of Porto Porto Portugal Agrupamento de Centros de Saúde (ACES) Baixo Mondego Figueira da Foz Portugal Universidade de Trás-os-Montes e Alto Douro Vila Real Portugal Centro de Salud La Paz Badajoz España Centro de Salud San Fernando Badajoz España Complejo Hospitalario Universitario de Badajoz Badajoz España Hospital Don Beni

S1 Health literacy and health education in adolescence Catarina Cardoso Tomás S2 The effect of a walking program on the quality of life and well-being of people with schizophrenia Emanuel Oliveira, D. Sousa, M. Uba-Chupel, G. Furtado, C. Rocha, A. Teixeira, P. Ferreira S3 Diagnosis and innovative treatments - the way to a better medical practice Celeste Alves S4 Simulation-based learning and how it is a high contribution Stefan Gisin S5 Formative research about acceptability, utilization and promotion of a home fortification programme with micronutrient powders (MNP) in the Autonomous Region of Príncipe, São Tomé and Príncipe Elisabete Catarino, Nelma Carvalho, Tiago Coucelo, Luís Bonfim, Carina Silva S6 Safety culture of the patient: a reflexion about the therapeutic approach on the patient with vocal pathology Débora Franco S7 About wine, fortune cookies and patient experience Jesús Alcoba González O1 The psychological impact on the emergency crews after the disaster event on February 20, 2010 Helena G. Jardim, Rita Silva O2 Musculoskeletal disorders in midwives Cristina L. Baixinho, Mª Helena Presado, Mª Fátima Marques, Mário E. Cardoso O3 Negative childhood experiences and fears of compassion: Implications for psychological difficulties in adolescence Marina Cunha, Joana Mendes, Ana Xavier, Ana Galhardo, Margarida Couto O4 Optimal age to give the first dose of measles vaccine in Portugal João G. Frade, Carla Nunes, João R. Mesquita, Maria S. Nascimento, Guilherme Gonçalves O5 Functional assessment of elderly in primary care Conceição Castro, Alice Mártires, Mª João Monteiro, Conceição Rainho O6 Smoking and coronary events in a population of Spanish health-care centre: An observational study Francisco P. Caballero, Fatima M. Monago, Jose T. Guerrero, Rocio M. Monago, Africa P. Trigo, Milagros L. Gutierrez, Gemma M. Milanés, Mercedes G. Reina, Ana G. Villanueva, Ana S. Piñero, Isabel R. Aliseda, Francisco B. Ramirez O7 Prevalence of musculoskeletal injuries in Por

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The effects of visual granularity on indoor spatial learning assisted by mobile 3D information displays

The effects of visual granularity on indoor spatial learning...

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International Conference on Spatial Cognition, SC 2012

作者： Giudice, Nicholas A. Li, Hengshan Spatial Informatics Program School of Computing and Information Science University of Maine Orono ME 04469 United States

ISBN: (纸本)9783642327315

There is growing interest in improving indoor navigation using 3D spatial visualizations rendered on mobile devices. However, the level of information conveyed by these visualization interfaces in order to best support indoor spatial learning has been poorly studied. This experiment investigates how learning of multi-level virtual buildings assisted by mobile 3D displays rendered at different levels of visual granularity effect subsequent unaided navigation tasks. The visual granularity levels include: a high fidelity model, low fidelity model, wireframe model and sparse model. Results showed that using the sparse model during learning led to the most accurate and efficient overall pointing and navigation performance and that between-floor judgments were less accurate when assistance during learning was unavailable. These findings demonstrate that more information is not necessarily better and provide new insights into the optimal information content to be included in mobile 3D visualization interfaces supporting indoor spatial learning and cognitive map development. © 2012 Springer-Verlag.

关键词： Visualization

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Using mobile 3D visualization techniques to facilitate multi-level cognitive map development of complex indoor spaces

Using mobile 3D visualization techniques to facilitate multi...

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Workshop on Spatial Knowledge Acquisition with Limited Information Displays 2012, SKALID 2012

作者： Li, Hengshan Giudice, Nicholas A. Spatial Informatics Program School of Computing and Information Science University of Maine Orono ME 04469 USA United States

Several studies have verified that multi-level floors are an obstacle for indoor wayfinding (e.g., navigators show greater angular error when making inter-level pointing judgments and experience more disorientation when wayfinding between floors). Previous literature has also suggested that a multi-level cognitive map could be a set of vertically super-imposed 2D cognitive maps and each level could be viewed as a region. However, little research has studied how one mentally connects / integrates the different levels of the 3D cognitive map. This paper provides new insight into how people may integrate multi-level cognitive maps based on the concept of a "transition point", a term used to represent the abstract point that connects different levels of the building. Based on transition points, we proposed the concept of simulated global indoor landmarks which are displayed on mobile devices. We predict that users can develop multi-level cognitive maps more efficiently when assisted by these global indoor landmarks. An ongoing behavioral experiment is briefly described aimed at providing empirical verification for these predictions.

关键词： Floors

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Poster abstracts

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Sleep and Biological Rhythms 2016年第1期5卷 A1-A189页

作者： J. Ferrie M. Shipley F. Cappuccio E. Brunner M. Miller M. Kumari M. Marmot A. Coenen J. L. Castillo F. Araya G. Bustamante L. Montecino C. Torres S. Oporto J. Gronli E. Fiske R. Murison B. Bjorvatn E. Sorensen R. Ursin C. M. Portas S. Rajaraman A. Gribok N. Wesensten T. Balkin J. Reifman N. Dursunoglu S. Ozkurt S. Baser O. Delen S. Sarikaya P. Sadler P. Mitchell D. Françon M. Decobert B. Herve A. Richard G. Griebel P. Avenet B. Scatton G. L. Fur D. Eckert A. Jordan A. Wellman S. Smith A. Malhotra D. White D. Bruck I. Thomas A. Kritikos W. Oertel K. Stiasny-Kolster D. Garcia-Borreguero W. Poewe B. Hoegl R. Kohnen E. Schollmayer J. Keffel C. Trenkwalder A. Valle S. Roizenblatt F. Fregni P. Boggio S. Tufik K. Ward L. Robertson L. Palmer P. Eastwood D. Hillman J. Lee S. Mukherjee V. de Padova G. Barbato G. Ficca I. Zilli P. Salzarulo M. Veldi T. Hion V. Vasar M. Kull L. Nowak J. Davis Y. Latzer O. Tzischinsky S. Crowley M. Carskadon M. Anca-Herschkovitsch D. Frey J. Ortega C. Wiseman C. Farley K. Wright A. Campbell A. Neill K. Spiegel R. Leproult E. Tasali N. Scherberg E. van Cauter A. T. Noradina N. A. Karim I. Norlinah A. A. Raymond R. Sahathevan B. Hamidon E. Werth R. Poryazova R. Khatami C. Bassetti R. G. Beran L. Ainley G. Holand J. Duncan H. Kinney B. Davis B. Hood S. Frey C. Schmidt M. Hofstetter P. Peigneux C. Cajochen W.-P. Hu J.-D. Li C. Zhang L. Boehmer J. Siegel Q.-Y. Zhou Y. Sagawa H. Kondo T. Takemura H. Kanayama Y. Kaneko M. Sato T. Kanbayashi Y. Hishikawa T. Shimizu A. Viola L. James L. Schlangen D.-J. Dijk R. Andretic Y.-C. Kim K.-A. Han F. Jones R. Greenspan L. Sanford L. Yang X. Tang K. Dieter E. Uta H. Sven M. Richard N. Oyane S. Pallesen F. Holsten Y. Inoue M. Fujita N. Emura K. Kuroda N. Uchimura A. Johnston J. Astbury G. Kennedy K. Hoedlmoser M. Schabus T. Pecherstorfer S. Moser G. Gruber P. Anderer W. Klimesch N. Naidoo M. Ferber A. Pack D. Neu O. Mairesse G. Hoffmann A. Dris L. Lambrecht P. Linkowski P. Verbanck O. Le Bon N. Matsuura M. Yamao N. Adachi R. Aritomi Y. Komada H. Tanaka S. Shirak University College London London UK University College London London USA Warwick Medical School London UK Warwick Medical School Coventry USA Radboud University Nijmegen Nijmegen Netherlands Department of Neurology University of Chile Santiago Chile Neurology Service Hospital del Salvador Santiago Chile Family Health Center Juan Pablo II Santiago Chile Department of Biomedicine Section on Physiology Univeristy of Bergen Bergen Norway Department of Public Health and Primary Health Care Univeristy of Bergen Bergen Norway Department of Public Health and Primary Health Care University of Bergen Bergen Norway Norwegian Competence Center for Sleep Disorders Haukeland University Hospital Bergen Norway Department of Child and Adolescent Psychiatry Haukeland University Hospital Univeristy of Bergen Bergen Norway Department of Biomedicine University of Bergen Bergen Norway US Army Medical Research and Materiel Command Fort Detrick Frederick USA Walter Reed Army Institute of Research Silver Spring USA Department of Behavioral Biology Walter Reed Army Institute of Research Silver Spring USA Faculty Department of Pulmonology Pamukkale University Medical Denizli Turkey University of Ballarat Ballarat Australia Sanofi-Aventis Recherche et Developpement Paris France Brigham and Women’s Hospital Harvard Medical School Boston USA The University of Queensland Adelaide Australia School of Psychology University of Queensland Brisbane Australia The University of Queensland Brisbane Australia Victoria University Melbourne Australia Department of Psychology Victoria University Melbourne Australia School of Psychology Victoria University Melbourne Australia Philips-Universität Marburg Germany Philips-Universitaet-Marburg Marburg Germany Instituto de Investigaciones del Sueno Madrid Spain Universitätsklinik für Neurologie Innsbruck Austria Universitaetsklinik fuer Neurologie Innsbruck Austria IMEREM GmbH Nuernberg Germany Schwarz Pharma AG Monheim Germany

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Semi-metric Networks for Recommender Systems

Semi-metric Networks for Recommender Systems

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IEEE WIC ACM International Conference on Web Intelligence (WI)

作者： Tiago Simas Luis M. Rocha Cognitive Science Program Indiana University Bloomington IN USA Center for Complex Networks and Systems School of Informatics & Computing Indiana University Bloomington IN USA

Weighted graphs obtained from co-occurrence in user-item relations lead to non-metric topologies. We use this semi-metric behavior to issue recommendations, and discuss its relationship to transitive closure on fuzzy graphs. Finally, we test the performance of this method against other item- and user-based recommender systems on the Movie lens benchmark. We show that including highly semi-metric edges in our recommendation algorithms leads to better recommendations.

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