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The TH Express high performance interconnect networks

Frontiers of Computer science 2014年第3期8卷 357-366页

作者： Zhengbin PANG Min XIE Jun ZHANG Yi ZHENG Guibin WANG Dezun DONG Guang SUO Science and Technology on Parallel and Distributed Processing Laboratory National University of Defense Technology Changsha 410073 China College of Computer National University of Defense Technology Changsha 410073 China

Interconnection network plays an important role in scalable high performance computer （HPC） systems. The TH Express-2 interconnect has been used in MilkyWay-2 system to provide high-bandwidth and low-latency interprocessot communications, and continuous efforts are devoted to the development of our proprietary interconnect. This paper describes the state-of-the-art of our proprietary interconnect, especially emphasizing on the design of network interface. Several key features are introduced, such as user-level communication, remote direct memory access, offload collective operation, and hardware reliable end-to-end communication, etc. The design of a low level message passing infrastructures and an upper message passing services are also proposed. The preliminary performance results demonstrate the efficiency of the TH interconnect interface.

关键词： HPC network interface chip （NIC） TH Express nterconnect offload collective operation

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Memory Access Analysis of Many-core System with Abundant Bandwidth

Memory Access Analysis of Many-core System with Abundant Ban...

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IEEE International Symposium on Embedded Multicore Socs (MCSoC)

作者： Chuan Tang Dan Liu Zuocheng Xing Peng Yang Zhe Wang Jiang Xu Parallel and Distributed Processing Laboratory National University of Defense Technology Changsha China Department of Electronic and Computer Engineering Hong Kong University of Science and Technology Hong Kong China

ISBN: (纸本)9781479986712

Many-core system is main architecture trend currently. One of the dominating challenges for on-chip manycore system is the memory wall. However traditional research primarily focus on the limited bandwidth. To solve this problem, many-core system is aided with large cache, and a lot of complex approaches about memory and cache are adopted aiming at relaxing the pressure of bandwidth and improving the efficiency of cache. All these methods generate much cost of area and power. In this paper, we are motivated by the feature of abundant bandwidth and low latency of optical interconnect. We analyze the characteristics of memory access on 64 cores system under the case of high bandwidth which can be assumed to benefit from optical interconnect, considering the sensibility with bandwidth and cache for different benchmarks. Finally, we discuss about promising basic frameworks suitable for manycore system with optical interconnect.

关键词： Bandwidth Benchmark testing Optical interconnections Random access memory Delays Hidden Markov models Computers

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HybridSwap: A scalable and synthetic framework for guest swapping on virtualization platform

HybridSwap: A scalable and synthetic framework for guest swa...

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IEEE Annual Joint Conference: INFOCOM, IEEE Computer and Communications Societies

作者： Pengfei Zhang Xi Li Rui Chu Huaimin Wang National Laboratory for Parallel and Distributed Processing National University of Defense Technology Changsha China School of Information Science and Engineering Central South University Changsha China

In IaaS cloud environments, peak memory demand caused by hotspot applications in Virtual Machine (VM) often results in performance degradation within and outside of this VM. Some solutions such as host swapping and ballooning for memory consolidation and overcommitment have been proposed. These solutions, however, have no help for addressing guest swapping issues inside VM. Even though host holds sufficient memory pages, guest OS is unable to utilize free pages in host directly due to the semantic gap between VMM and it. Our goal is to alleviate the performance degradation by decreasing disk I/O operations generated by guest swapping. Based on the insight analysis of behavioral features of guest swapping, we design HybridSwap, a distributed scalable framework which organize surplus memory in all hosts within data center into virtual pools for swapping. This framework builds up a synthetic swapping mechanism in a peer-to-peer way, which VM can adaptively choose suitable pools for swapping. We implement the prototype of HybridSwap and evaluate it with different benchmarks. The results demonstrate that our solution has the ability to promote the guest swapping efficiency indeed. Even in some cases, it shows 2-5 times of performance promotion compared with the baseline setup.

关键词： Benchmark testing Virtualization Semantics Servers Operating systems Degradation Instruction sets

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MilkyWay-2： back to the world Top 1

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Frontiers of Computer science 2014年第3期8卷 343-344页

作者： Xiangke LIAO Science and Technology on Parallel and Distributed Processing Laboratory National University of Defense Technology Changsha 410073 China College of Computer National University of Defense Technology Changsha 410073 China

On the 41st Top500 list announced in June 2013, the MilkyWay-2 system produced by National University of Defense technology （NUDT） in China won the first place with a LINPACK test result of 33.86 PFLOPS. It has been one and a half year since its predecessor, MilkyWay-1 （TH-1）, reached the same place for the first time. On the newest Top500 list published in November 2013, MilkyWay-2 continued to win the champion.

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Accelerating FDTD simulation of microwave pulse coupling into narrow slots on the Intel MIC architecture

Accelerating FDTD simulation of microwave pulse coupling int...

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IEEE Pacific Rim Conference on Communications, Computers and Signal Processing

作者： Qinglin Wang Jie Liu Xiantao Cui Guitao Fu Chunye Gong Zuocheng Xing School of Computer Science National University of Defense Technology Changsha China Science and Technology on Parallel and Distributed Processing Laboratory National University of Defense Technology Changsha China Beijing Satellite Navigation Center Beijing China

ISBN: (纸本)9781467377898

The coupling of microwaves into apertures plays an important part in many electromagnetic physics and engineering fields. When the width of apertures is very small, Finite Difference Time Domain (FDTD) simulation of the coupling is very time-consuming. As a many-core architecture, the Intel's Many Integrated Core (MIC) architecture owns 512-bit vector units and more than 200 threads. In this paper, we parallelize FDTD simulation of microwave pulse coupling into narrow slots on the Intel MIC architecture. In the implementation, the parallel programming model OpenMP is used to exploit thread parallelism while loop unrolling and SIMD intrinsic functions are utilized to accomplish vectorization. Compared with the serial version on Intel Xeon E5-2670 CPU, the implementation on the MIC coprocessor including 57 cores obtains a speedup of 11.57 times. The experiment results also demonstrate that the parallelization has good scalability in performance. Additionally, how binding relationship between OpenMP threads and hardware threads in MIC influences performance is also reported.

关键词： Microwave integrated circuits Finite difference methods Time-domain analysis Chlorine Hardware

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Improving vertex-frontier based GPU breadth-first search

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Journal of Central South University 2014年第10期21卷 3828-3836页

作者：杨博卢凯高颖慧徐凯王小平程志权 Science and Technology on Parallel and Distributed Processing Laboratory National University of Defense Technology College of Computer National University of Defense Technology Department of Electronic Science and Engineering National University of Defense Technology Avatar Science Company

Breadth-first search(BFS) is an important kernel for graph traversal and has been used by many graph processing applications. Extensive studies have been devoted in boosting the performance of BFS. As the most effective solution, GPU-acceleration achieves the state-of-the-art result of 3.3×109 traversed edges per second on a NVIDIA Tesla C2050 GPU. A novel vertex frontier based GPU BFS algorithm is proposed, and its main features are three-fold. Firstly, to obtain a better workload balance for irregular graphs, a virtual-queue task decomposition and mapping strategy is introduced for vertex frontier expanding. Secondly, a global deduplicate detection scheme is proposed to remove reduplicative vertices from vertex frontier effectively. Finally, a GPU-based bottom-up BFS approach is employed to process large frontier. The experimental results demonstrate that the algorithm can achieve 10% improvement over the state-of-the-art method on diverse graphs. Especially, it exhibits 2-3 times speedup on low-diameter and scale-free graphs over the state-of-the-art on a NVIDIA Tesla K20 c GPU, reaching a peak traversal rate of 11.2×109 edges/s.

关键词： breadth-first search GPU graph traversal vertex frontier

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Fast image matching algorithm based on affine invariants

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Journal of Central South University 2014年第5期21卷 1907-1918页

作者：张毅卢凯高颖慧 National Laboratory for Parallel and Distributed Processing(National University of Defense Technology) College of Computer National University of Defense Technology College of Electronic Science and Engineering National University of Defense Technology

Feature-based image matching algorithms play an indispensable role in automatic target recognition （ATR）. In this work, a fast image matching algorithm （FIMA） is proposed which utilizes the geometry feature of extended centroid （EC） to build affine invariants. Based on at-fine invariants of the length ratio of two parallel line segments, FIMA overcomes the invalidation problem of the state-of-the-art algorithms based on affine geometry features, and increases the feature diversity of different targets, thus reducing misjudgment rate during recognizing targets. However, it is found that FIMA suffers from the parallelogram contour problem and the coincidence invalidation. An advanced FIMA is designed to cope with these problems. Experiments prove that the proposed algorithms have better robustness for Gaussian noise, gray-scale change, contrast change, illumination and small three-dimensional rotation. Compared with the latest fast image matching algorithms based on geometry features, FIMA reaches the speedup of approximate 1.75 times. Thus, FIMA would be more suitable for actual ATR applications.

关键词： affine invariants image matching extended centroid robustness performance

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Design and Implementation of a Highly Efficient DGEMM for 64-Bit ARMv8 Multi-core Processors

Design and Implementation of a Highly Efficient DGEMM for 64...

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International Conference on parallel Processing (ICPP)

作者： Feng Wang Hao Jiang Ke Zuo Xing Su Jingling Xue Canqun Yang School of Computer Science National University of Defense Technology Changsha China School of Computer Science and Engineering University of New South Wales NSW Australia Science and Technology on Parallel and Distributed Processing Laboratory National University of Defense Technology Changsha China

This paper presents the design and implementation of a highly efficient Double-precision General Matrix Multiplication (DGEMM) based on Open BLAS for 64-bit ARMv8 eight-core processors. We adopt a theory-guided approach by first developing a performance model for this architecture and then using it to guide our exploration. The key enabler for a highly efficient DGEMM is a highly-optimized inner kernel GEBP developed in assembly language. We have obtained GEBP by (1) maximizing its compute-to-memory access ratios across all levels of the memory hierarchy in the ARMv8 architecture with its performance-critical block sizes being determined analytically, and (2) optimizing its computations through exploiting loop unrolling, instruction scheduling and software-implemented register rotation and taking advantage of A64 instructions to support efficient FMA operations, data transfers and prefetching. We have compared our DGEMM implemented in Open BLAS with another implemented in ATLAS (also in terms of a highly-optimized GEBP in assembly). Our implementation outperforms the one in ALTAS by improving the peak performance (efficiency) of DGEMM from 3.88 Gflops (80.9%) to 4.19 Gflops (87.2%) on one core and from 30.4 Gflops (79.2%) to 32.7 Gflops (85.3%) on eight cores. These results translate into substantial performance (efficiency) improvements by 7.79% on one core and 7.70% on eight cores. In addition, the efficiency of our implementation on one core is very close to the theoretical upper bound 91.5% obtained from micro-benchmarking. Our parallel implementation achieves good performance and scalability under varying thread counts across a range of matrix sizes evaluated.

关键词： Registers Kernel Computational modeling Program processors Assembly Memory management

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Iaso： an autonomous fault-tolerant management system for supercomputers

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Frontiers of Computer science 2014年第3期8卷 378-390页

作者： Kai LU Xiaoping WANG Gen LI Ruibo WANG Wanqing CHI Yongpeng LIU Hongwei TANG Hua FENG Yinghui GAO Science and Technology on Parallel and Distributed Processing Laboratory National University of Defense Technology Changsha 410073 China College of Computer National University of Defense Technology Changsha 410073 China ATR Laboratory National University of Defense Technology Changsha 410073 China

With the increase of system scale, the inherent reliability of supercomputers becomes lower and lower. The cost of fault handling and task recovery increases so rapidly that the reliability issue will soon harm the usability of supercomputers. This issue is referred to as the ＂reliability wall＂, which is regarded as a critical problem for current and future supercomputers. To address this problem, we propose an autonomous fault-tolerant system, named Iaso, in MilkyWay- 2 system. Iaso introduces the concept of autonomous management in supercomputers. By autonomous management, the computer itself, rather than manpower, takes charge of the fault management work. Iaso automatically manage the whole lifecycle of faults, including fault detection, fault diagnosis, fault isolation, and task recovery. Iaso endows the autonomous features with MilkyWay-2 system, such as self-awareness, self-diagnosis, self-healing, and self-protection. With the help of Iaso, the cost of fault handling in supercomputers reduces from several hours to a few seconds. Iaso greatly improves the usability and reliability of MilkyWay-2 system.

关键词： supercomputer autonomous management fault tolerant fault management MilkyWay-2 system

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Maximizing the information diffusion opportunity in the cyber-physical network

Maximizing the information diffusion opportunity in the cybe...

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International Conference on Quality of Service in Heterogeneous Wired/Wireless Networks (QSHINE)

作者： Hongliang Lu Xuan Dong Wenxiang Li Saohe Lv Xiaodong Wang Wei Chen Science and Technology on Parallel and Distributed Processing Laboratory National University of Defense Technology Hunan China School of Information Science and Engineering Wuhan University of Science and Technology Wuhan China Engineering Research Center for Metallurgical Automation and Detecting Technology of Ministry of Education Wuhan University of Science and Technology Wuhan China

ISBN: (纸本)9781479982172

Our daily life is changing by the smart objects, such as smart watches, smart phones etc. They make the cyber world and the physical world integrated by their abundant abilities of sensing, communication and computation etc. Focusing on a wide range of the integrated network, a statistical based strategy was introduced to get a special kind of link between objects, the statistical probability communication link. To get a maximized information spread probability for grouped people, this paper introduced a distributed, yet efficient algorithm naming DMPID algorithm, for finding a sub-network to spread people oriented inforamtion. The DMPID algorithm take the size of the selection and the information spread probability into account, and made a balance between the two parameters. Extended simulation showed that the DMPID algorithm performs well in different distributed networks.

关键词： distributed algorithms probability statistical analysis telecommunication networks DMPID algorithm cyber world cyber-physical network distributed maximizing probability of information diffusion information diffusion opportunity information spread probability statistical probability communication link

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