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4th International Conference on Informatics, Multimedia, Cyber and Information System, ICIMCIS 2022

作者： Asadi, Faisal Trinugroho, Joko Pebrianto Hidayat, Alam Ahmad Rahutomo, Reza Pardamean, Bens Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta11480 Indonesia School of Information Systems Bina Nusantara University Information System Department Jakarta11480 Indonesia Binus Graduate Program Master of Computer Science Bina Nusantara University Computer Science Department Jakarta11480 Indonesia

ISBN: (纸本)9781665473279

Tropical disease is one of the infectious diseases that affect Indonesia. Many people die because of tropical diseases, such as dengue hemorrhagic fever (DHF), chikungunya, leprosy, lymphatic, and filariasis. The Indonesian government's lack of public policy is the main problem in treating and preventing tropical diseases. The paper aims to describe the analysis results of the incidence of DHF in Jakarta, Indonesia. The analysis used the DHF incidences data from the Jakarta Health service surveillance office representative and combined it with the meteorological parameters data. The meteorological parameters were collected from the Bureau of Meteorological Climatology and Geophysics (BMKG). The statistical analysis of this research used Pearson's correlation. The results show that the meteorological parameters affecting DHF incidences are temperature, humidity, and wind speed. © 2022 IEEE.

关键词： Correlation methods

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Contract-Inspired Contest Theory for Controllable Image Generation in Mobile Edge Metaverse

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IEEE Transactions on Mobile Computing 2025年

作者： Liu, Guangyuan Du, Hongyang Wang, Jiacheng Niyato, Dusit Kim, Dong In Nanyang Technological University College of Computing and Data Science Energy Research Institute @ NTU Interdisciplinary Graduate Program Singapore University of Hong Kong Department of Electrical and Electronic Engineering Hong Kong Hong Kong Nanyang Technological University College of Computing and Data Science Singapore Sungkyunkwan University Department of Electrical and Computer Engineering Korea Republic of

The rapid advancement of immersive technologies has propelled the development of the Metaverse, where the convergence of virtual and physical realities necessitates the generation of high-quality, photorealistic images to enhance user experience. However, generating these images, especially through Generative Diffusion Models (GDMs), in mobile edge computing environments presents significant challenges due to the limited computing resources of edge devices and the dynamic nature of wireless networks. This paper proposes a novel framework that integrates contract-inspired contest theory, Deep Reinforcement Learning (DRL), and GDMs to optimize image generation in these resource-constrained environments. The framework addresses the critical challenges of resource allocation and semantic data transmission quality by incentivizing edge devices to efficiently transmit high-quality semantic data, which is essential for creating realistic and immersive images. The use of contest and contract theory ensures that edge devices are motivated to allocate resources effectively, while DRL dynamically adjusts to network conditions, optimizing the overall image generation process. Experimental results demonstrate that the proposed approach not only improves the quality of generated images but also achieves superior convergence speed and stability compared to traditional methods. This makes the framework particularly effective for optimizing complex resource allocation tasks in mobile edge Metaverse applications, offering enhanced performance and efficiency in creating immersive virtual environments. © 2002-2012 IEEE.

关键词： Resource allocation

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Identifying Important Usernames in 'Biofarma' Conversation using Twitter Network Analysis 7

Identifying Important Usernames in 'Biofarma' Conversation u...

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7th International Conference on Information Management and Technology, ICIMTech 2022

作者： Rahutomo, Reza Jariyah, Ainun Trinugroho, Joko Pebrianto Pardamean, Bens School of Information Systems Bina Nusantara University Information Systems Department Jakarta11480 Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta11480 Indonesia BINUS Graduate Program-Master of Computer Science Bina Nusantara University Computer Science Department Jakarta11480 Indonesia

ISBN: (数字)9781665450904

ISBN: (纸本)9781665450904

This study analyzed interactions between Twitter users in conversations regarding Indonesia's state-owned vaccine manufacturer 'Biofarma' in 2021. The primary objective of this study is to identify Key Opinion Leaders (KOL) due to the need of authentic and trustworthy persona in social media. A technique called network centrality was employed in this research alongside four centrality measurements, namely degree of centrality, eigenvector centrality, betweenness centrality, and closeness centrality. Focused on using a reply network interaction dataset, the research discovered several important usernames with different roles that enlivened the conversation and have a potential for social media marketing optimization. © 2022 IEEE.

关键词： Marketing

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A Design of Childhood Stunting Assessment Feature with Agile UX Approach 8

A Design of Childhood Stunting Assessment Feature with Agile...

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8th International HCI and UX Conference in Indonesia, CHIuXiD 2022

作者： Rahutomo, Reza Perbangsa, Anzaludin Samsinga Asadi, Faisal Nirwantono, Rudi Pardamean, Bens Bina Nusantara University School of Information Systems Information Systems Department Jakarta11480 Indonesia Bina Nusantara University Bioinformatics and Data Science Research Center Jakarta11480 Indonesia Bina Nusantara University BINUS Graduate Program-Master of Computer Science Computer Science Department Jakarta11480 Indonesia

ISBN: (纸本)9781665476645

multidisciplinary collaboration between public health, system engineering, and UX is able to generate a solution in healthcare problem like stunting. The principle of Agile UX gathers requirements to generate an application design. Currently, various website and mobile applications are available to be utilized for stunting research. StuntingDB is one of many web-based applications that specialized in stunting data management. The application required several types of users to operate hierarchically. This research focused on Public Health Officers' workflow that require a solution to in the form of assessment module for stunting DBMS by using Agile UX principle. The method collaborates agile team and UX team to solve Public Health Officer's difficulty in changing stunting status at pre-saved child patient's profile. Collaboration of both agile team and UX team successfully proposed an application design that system design. © 2022 IEEE.

关键词： Websites

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An Object Driven Fuzzy Decision Model for Sugarcane Yield Prediction in Indonesia’s Sugar Industry

An Object Driven Fuzzy Decision Model for Sugarcane Yield Pr...

引用

International Seminar on Research of Information Technology and Intelligent Systems (ISRITI)

作者： Ditdit Nugeraha Utama Muhammad Asrol Suharjito Christian Harito Napthaleni Muhammad Syafrudin Computer Science Department BINUS Graduate Program Master of Computer Science Bina Nusantara University Jakarta Indonesia Industrial Engineering Department BINUS Graduate Program Master of Industrial Engineering Bina Nusantara University Jakarta Indonesia Department of Artificial Intelligence and Data Science Sejong University Seoul South Korea

ISBN: (数字)9798331519643

ISBN: (纸本)9798331519650

A sugarcane yield of one plantation area depends on several independent variables. Practically it is challenging to predict accurately by using conventional methods. This study aims to develop a decision model based on a combination of fuzzy logic and object-oriented methods to predict sugarcane yield. The research is conducted in four main stages, employing object-oriented methods for model design and fuzzy logic for model construction. Object and activity diagrams are used for the object-oriented model design. The fuzzy membership functions employed are a combination of trapezoidal and triangular shapes. The resulting decision model can simulate 2,225 data from plantation areas in Indonesia. Based on the 10 examples of plantation area data in Indonesia, plantation number one obtained the largest sugarcane yield, which was 4.79%, with a similarity value of 0.90 (when compared to manual calculations as its ground truth). This similarity value is a higher value when compared to the average similarity value, which is 0.89.

关键词： Fuzzy logic Seminars Shape Object oriented modeling Plantations Manuals Predictive models Sugar industry Intelligent systems Information technology

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Utilizing Semi-supervised Method in Predicting BRCA1 Pathogenicity Variants

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Procedia Computer science 2023年 227卷 36-45页

作者： Alam Ahmad Hidayat Joko Pebrianto Trinugroho Rudi Nirwantono Digdo Sudigyo Bens Pardamean Department of Mathematics School of Computer Science Bina Nusantara University Indonesia 11480 Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia 11480 Computer Science Department BINUS Graduate Program Bina Nusantara University Jakarta Indonesia 11480

Quantifying the effect of mutations in the BRCA1 gene is useful for understanding their clinical consequences on breast cancer. Machine learning models can be applied to predict the landscape of protein variant effects that might not be always accessible by experiments. In this work, we propose a simple semi-supervised learning method using a Gaussian mixture model to predict ∼90% of the unlabeled missense variants of the BRCA1 gene collected from the ClinVar database. High-quality embeddings are used as a feature of the protein sequences, extracted using the latest pre-trained transformer-based language protein model. A statistical test show that the protein embeddings are effective and robust for predicting pathogenicity. Further, the lower representations of the features are then fed into the semi-supervised model. The prediction performance of the model only for the labeled testing data achieves an AUC score and an accuracy of 79.27% and 71.58%, respectively. Using our defined pathogenic probability score, we find that ∼94% of variants in our unlabeled dataset are well-separated into either benign or pathogenic classes according to that scoring. Our scores obtain a moderate Spearman rank correlation with the results of established unsupervised variant effect models. Finally, our approach can potentially be developed for more accurate and biologically reliable predictions of the variant effects.

关键词： embeddings mutation effect language model protein sequence semi-supervised learning

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Amico: Message Exchange Service for Elderly People 11

Amico: Message Exchange Service for Elderly People

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11th IEEE Global Conference on Consumer Electronics, GCCE 2022

作者： Isozaki, Atsushi Fukae, Kazuki Arai, Kenichi Kobayashi, Toru Nakamura, Masahide Nagasaki University Computer and Information Science Program Graduate School of Engineering Nagasaki Japan Nagasaki University Division of Electrical Engineering and Computer Science Graduate School of Engineering Nagasaki Japan Kobe University Center of Mathematical and Data Sciences Hyogo Japan

ISBN: (纸本)9781665492324

This study is related to a system that enables elderly people to communicate interactively with young people who use existing message exchange services by simply speaking to an avatar on a tablet PC, without having to perform complicated operations of the tablet PC. On the other hand, the young people side can bring in elderly people who could not previously participate in existing message exchange services groups. The effectiveness of the system was verified through demonstration experiments with two households consisting of elderly people in their 80s. © 2022 IEEE.

关键词： Personal computers

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From RAG to QA-RAG: Integrating Generative AI for Pharmaceutical Regulatory Compliance Process

arXiv

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arXiv 2024年

作者： Kim, Jaewoong Min, Moohong Department of Applied Data Science Sungkyunkwan University Korea Republic of Social Innovation Convergence Program University College Sungkyunkwan University Korea Republic of

Regulatory compliance in the pharmaceutical industry entails navigating through complex and voluminous guidelines, often requiring significant human resources. To address these challenges, our study introduces a chatbot model that utilizes generative AI and the Retrieval Augmented Generation (RAG) method. This chatbot is designed to search for guideline documents relevant to the user inquiries and provide answers based on the retrieved guidelines. Recognizing the inherent need for high reliability in this domain, we propose the Question and Answer Retrieval Augmented Generation (QA-RAG) model. In comparative experiments, the QA-RAG model demonstrated a significant improvement in accuracy, outperforming all other baselines including conventional RAG methods. This paper details QA-RAG’s structure and performance evaluation, emphasizing its potential for the regulatory compliance domain in the pharmaceutical industry and beyond. We have made our work publicly available for further research and development. © 2024, CC BY-NC-SA.

关键词： Regulatory compliance

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The Technology behind Genomic database 4

The Technology behind Genomic Database

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4th International Conference on Cybernetics and Intelligent System, ICORIS 2022

作者： Trinugroho, Joko Pebrianto Perbangsa, Anzaludin Samsinga Pardamean, Bens Bina Nusantara University Bioinformatics and Data Science Research Center Jakarta11480 Indonesia School of Information Systems Bina Nusantara University Information Systems Department Jakarta11480 Indonesia Bina Nusantara University BINUS Graduate Program - Master of Computer Science Computer Science Department Jakarta11480 Indonesia

ISBN: (纸本)9781665453950

In this digital era, we are exposed to a large amount of data. This includes biological data, which stores information about living organisms, including Deoxyribonucleic acid (DNA), genes, and proteins. With the development of information technology and information system, most of available biological data are stored in an online public database. Many of the databases are free-access and easily used, which helps the users, especially researchers, to make use of the data. Among the known public biological databases are the University of California Santa Cruz (UCSC) Genome Browser database and the Rat Genome database (RGD). These two databases provide access to the biological data from different organisms. This paper aims to describe the technology of public biological databases. Also elucidated in this paper are the differences features between UCSC Genome Browser database and the RGD. Our results showed that the UCSC contains much more biological data and features than the RGD. However, the genome browser of UCSC has a complex display, while the RGD has a simple display. Overall, both databases give the users the option to choose the most suitable database for them. © 2022 IEEE.

关键词： Rats

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Identifying Extreme Events in the Stock Market: A Topological data Analysis

arXiv

引用

arXiv 2024年

作者： Rai, Anish Sharma, Buddha Nath Luwang, Salam Rabindrajit Nurujjaman, Md. Majhi, Sushovan Department of Physics National Institute of Technology Sikkim Sikkim737139 India Data Science Program George Washington University 20052 United States

This paper employs Topological data Analysis (TDA) to detect extreme events (EEs) in the stock market at a continental level. Previous approaches, which analyzed stock indices separately, could not detect EEs for multiple time series in one go. TDA provides a robust framework for such analysis and identifies the EEs during the crashes for different indices. The TDA analysis shows that L1, L2 norms and Wasserstein distance (WD) of the world leading indices rise abruptly during the crashes, surpassing a threshold of µ + 4 ∗ σ where µ and σ are the mean and the standard deviation of norm or WD, respectively. Our study identified the stock index crashes of the 2008 financial crisis and the COVID-19 pandemic across continents as EEs. Given that different sectors in an index behave differently, a sector-wise analysis was conducted during the COVID-19 pandemic for the Indian stock market. The sector-wise results show that after the occurrence of EE, we have observed strong crashes surpassing µ + 2 ∗ σ for an extended period for the banking sector. While for the pharmaceutical sector, no significant spikes were noted. Hence, TDA also proves successful in identifying the duration of shocks after the occurrence of EEs. This also indicates that the Banking sector continued to face stress and remained volatile even after the crash. This study gives us the applicability of TDA as a powerful analytical tool to study EEs in various fields. © 2024, CC BY.

关键词： Financial markets

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