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arXiv 2019年

作者： Liu, Qi Tong, Shiwei Liu, Chuanren Zhao, Hongke Chen, Enhong Ma, Haiping Wang, Shijin Anhui Province Key Laboratory of Big Data Analysis and Application School of Computer Science and Technology School of Data Science University of Science and Technology of China Business Analytics and Statistics University of Tennessee College of Management and Economics Tianjin University IFLYTEK Research IFLYTEK CO. LTD. State Key Laboratory of Cognitive Intelligence

Adaptive learning, also known as adaptive teaching, relies on learning path recommendation, which sequentially recommends personalized learning items (e.g., lectures, exercises) to satisfy the unique needs of each learner. Although it is well known that modeling the cognitive structure including knowledge level of learners and knowledge structure (e.g., the prerequisite relations) of learning items is important for learning path recommendation, existing methods for adaptive learning often separately focus on either knowledge levels of learners or knowledge structure of learning items. To fully exploit the multifaceted cognitive structure for learning path recommendation, we propose a Cognitive Structure Enhanced framework for Adaptive Learning, named CSEAL. By viewing path recommendation as a Markov Decision Process and applying an actor-critic algorithm, CSEAL can sequentially identify the right learning items to different learners. Specifically, we first utilize a recurrent neural network to trace the evolving knowledge levels of learners at each learning step. Then, we design a navigation algorithm on the knowledge structure to ensure the logicality of learning paths, which reduces the search space in the decision process. Finally, the actor-critic algorithm is used to determine what to learn next and whose parameters are dynamically updated along the learning path. Extensive experiments on real-world data demonstrate the effectiveness and robustness of CSEAL. Copyright © 2019, The Authors. All rights reserved.

关键词： Markov processes

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RETRACTED ARTICLE: An enhanced pairing-based authentication scheme for smart grid communications

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Journal of Ambient Intelligence and Humanized Computing 2021年第1期15卷 165-165页

作者： Wu, Tsu-Yang Lee, Yu-Qi Chen, Chien-Ming Tian, Yuan Al-Nabhan, Najla Abdulrahman College of Computer Science and Engineering Shandong University of Science and Technology Qingdao China School of Information Science and Engineering Fujian University of Technology Fuzhou China Fujian Provincial Key Laboratory of Big Data Mining and Applications Fujian University of Technology Fuzhou China School of Computer Engineering Nanjing Institute of Technology Nanjing China Computer Science Department College of Computer and Information Sciences King Saud University Riyadh Kingdom of Saudi Arabia

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Gut microbiota and diabetes: From correlation to causality and mechanism

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World Journal of Diabetes 2020年第7期11卷 293-308页

作者： Wei-Zheng Li Kyle Stirling Jun-Jie Yang Lei Zhang Microbiome-X Beijing Advanced Innovation Center for Big Data-Based Precision MedicineSchool of Medicine and EngineeringKey Laboratory of Big Data-Based Precision MedicineBeihang UniversityBeijing 100191China School of Biological Science and Medical Engineering Beihang UniversityBeijing 100191China Luddy School of Informatics Computing and EngineeringIndiana UniversityBloomingtonIN 47408United States The Crisis Technologies Innovation Lab Indiana UniversityThe Information Technology Services and the Pervasive Technology InstituteBloomingtonIN 47408United States Shandong Institute of Industrial Technology for Health Sciences and Precision Medicine Jinan 250000Shandong ProvinceChina College of Life Science Qilu Normal UniversityJinan 250000Shandong ProvinceChina Microbiome Research Center Shandong Institutes for Food and Drug ControlJinan 250000Shandong ProvinceChina Shandong Children’s Microbiome Center Qilu Children's Hospital of Shandong UniversityJinan 250000Shandong ProvinceChina Microbiological Laboratory Lin Yi People’s HospitalLinyi 276000Shandong ProvinceChina Qingdao Human Microbiome Center The Affiliated Central Hospital of Qingdao UniversityQingdao 266000Shandong ProvinceChina Institute for Medical Dataology Cheeloo College of MedicineShandong UniversityJinan 250000Shandong ProvinceChina Department of Biostatistics School of Public HealthCheeloo College of MedicineShandong UniversityJinan 250000Shandong ProvinceChina Shandong Children’s Microbiome Center Research Institute of PediatricsQilu Children's HospitalCheeloo College of MedicineShandong Universityand Jinan Children's HospitalJinan 250022Shandong ProvinceChina

In this review,we summarize the recent microbiome studies related to diabetes disease and discuss the key findings that show the early emerging potential causal roles for *** a global scale,diabetes causes a significant negative impact to the health status of human *** review covers type 1 diabetes and type 2 *** examine promising studies which lead to a better understanding of the potential mechanism of microbiota in diabetes *** appears that the human oral and gut microbiota are deeply interdigitated with *** is that *** studies of the human microbiome are capturing the attention of scientists and healthcare practitioners worldwide by focusing on the interplay of gut microbiome and *** studies focus on the role and the potential impact of intestinal microflora in *** paint a clear picture of how strongly microbes are linked and associated,both positively and negatively,with the fundamental and essential parts of diabetes in *** microflora seems to have an endless capacity to impact and transform *** conclude that there is clear and growing evidence of a close relationship between the microbiota and diabetes and this is worthy of future investments and research efforts.

关键词： Diabetes Microbiota Causality Mechanism Type 1 diabetes Type 2 diabetes Insulin resistance Inflammation Metabolites

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Multi-view ontology alignment visualization (MOAV): A human-cognition based ontology alignment visualization technique

Journal of Network Intelligence

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Journal of Network Intelligence 2020年第4期5卷 198-210页

作者： Chen, Jie Zhang, Jie Xue, Xingsi Huang, Yikun Fujian Provincial Key Laboratory of Big Data Mining and Applications Fujian University of Technology No.33 Xueyuan Road University Town Minhou FuzhouFujian350118 China School of Computer Science and Engineering Yulin Normal University No.299 Education Middle Road Yulin CityGuanxi Province537000 China Fujian Provincial Key Laboratory of Big Data Mining and Applications Intelligent Information Processing Research Center Fujian University of Technology No.33 Xueyuan Road University Town Minhou FuzhouFujian350118 China Guangxi Key Laboratory of Automatic Detecting Technology and Instruments Guilin University of Electronic Technology No.1 Jinji Road Guangxi Guilin541004 China Department of Information Technology Concord University College Fujian Normal University No.68 Xueyuan Road University Town Minhou FuzhouFujian350117 China

To further improve the quality of ontology alignment, it is necessary for an ontology matcher to introduce a user’s knowledge into its automatic matching process, which yields the development of interactive ontology matching techniques. Since validating problematic entity correspondences is a difficult cognition task, user interaction based on Ontology Alignment Visualization (OAV) has become the critical component of an interactive ontology matcher, which directly affects the quality of validating result and the efficiency of validating process. The existing OAV tools are mainly developed based on their designers’ subjective feelings and experiences, which do not take into consideration the law of human cognition. To improve the efficiency of the ontology alignment validating process, in this paper, a Multi-view OAV (MOAV) is proposed, which synthetically utilizes the human cognitive theory-information visualization and human-computer inter-action. The experiment utilizes the Ontology Alignment Evaluation Initiative (OAEI)’s benchmark to test the performance of our proposal, and the experimental results show that MOAV can effectively improve a user’s validating efficiency. © 2020, Taiwan Ubiquitous Information. All rights reserved.

关键词： Visualization

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Ball k-means

arXiv

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arXiv 2020年

作者： Xia, Shuyin Peng, Daowan Meng, Deyu Zhang, Changqing Wang, Guoyin Chen, Zizhong Wei, Wei Department of Chongqing Key Laboratory of Computational Intelligence Chongqing University of Posts and Telecommunications Chongqing400065 China National Engineering Laboratory for Algorithm and Analysis Technologiy on Big Data Xian Jiaotong University Xi'an710049 China College of Intelligence and Computing Tianjin University 300072 China Department of Computer Science and Engineering University of California Riverside 900 University Avenue RiversideCA92521 United States School of Computer Science and Engineering Xi'an University of Technology Xi'an710048 China

This paper presents a novel accelerated exact k-means algorithm called the Ball k-means algorithm, which uses a ball to describe a cluster, focusing on reducing the point-centroid distance computation. The Ball k-means can accurately find the neighbor clusters for each cluster resulting distance computations only between a point and its neighbor clusters centroids instead of all centroids. Moreover, each cluster can be divided into a stable area and an active area, and the later one can be further divided into annulus areas. The assigned cluster of the points in the stable area is not changed in the current iteration while the points in the annulus area will be adjusted within a few neighbor clusters in the current iteration. Also, there are no upper or lower bounds in the proposed Ball k-means. Furthermore, reducing centroid-centroid distance computation between iterations makes it efficient for large k clustering. The fast speed, no extra parameters and simple design of the Ball k-means make it an all-around replacement of the naive k-means algorithm. Copyright © 2020, The Authors. All rights reserved.

关键词： K-means clustering

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Adaptive Teacher-and-Student Model for Heterogeneous Domain Adaptation

Adaptive Teacher-and-Student Model for Heterogeneous Domain ...

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IEEE International Conference on data Mining (ICDM)

作者： Yunyun Wang Xuzhang Chen Songcan Chen Hui Xue College of Computer Science Jiangsu Key Laboratory of Big Data Security & Intelligent Processing Nanjing University of Posts & Telecommunications Nanjing China College of Computer Science & Technology/AI MIIT Key Laboratory of Pattern Analysis and Machine Intelligence Nanjing University of Aeronautics & Astronautics Nanjing China College of Computer Science and Engineering Southeast University Nanjing China

In heterogeneous domain adaptation (HDA), since the feature spaces of the source and target domains are different, knowledge transfer from the source to the target domain is really challenging. How to align the different feature spaces and then adaptively transfer the related knowledge is critical for HDA. In this paper, we develop an adaptive teacher-and-student model for heterogeneous domain adaptation (AtsHDA). In AtsHDA, the source domain as a teacher and the target domain as a student are aligned or co-adapted to each other first, so that their correlation can be maximized. Then the target domain adaptively learns from the source domain. Specifically, there is a balance between the learning by the target domain itself and the instruction from the source domain. That is, when the guidance from the source domain is helpful for learning, the learning of target classifier emphasizes the instruction of source knowledge, and considers its own knowledge more, otherwise. Further, an ensemble method is designed to decide such a balance. Finally, empirical results show that AtsHDA can achieve competitive results compared with the state-of-arts.

关键词：

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Transfer learning identifies bacterial signatures for cross-regional diagnosis of type 2 diabetes and enable stage-sensitive dietary fiber intervention

iMetaOmics

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iMetaOmics 2025年第2期2卷

作者： Qunye Zhang Nan Wang Fanghua Zhang Bin Chen Yihui Wang Zhongchao Wang Changying Zhao Chuandi Jin Dashuang Sheng Kaile Yue Daifeng Jiang Liaomei Gao Haohong Zhang Zixin Kang Mingyue Cheng Xiaoli Ma Haiyan Wang Dongming Hu Jun Wang Yuantao Liu Chenhong Zhou Minxiu Yao Guoping Zhao Yangang Wang Zhe Wang Kang Ning Lei Zhang Microbiome-X School of Public Health Department of Cardiology Qilu Hospital Cheeloo College of Medicine Shandong University Jinan China Key Laboratory of Molecular Biophysics of the Ministry of Education Hubei Key Laboratory of Bioinformatics and Molecular-Imaging Center of AI Biology Department of Bioinformatics and Systems Biology College of Life Science and Technology Huazhong University of Science and Technology Wuhan China Department of Endocrinology Qingdao Central Hospital University of Health and Rehabilitation Sciences (Qingdao Central Hospital) Qingdao China Qingdao University Medical Group: Department of Endocrinology and Metabolism The Affiliated Hospital of Qingdao University Department of Endocrinology and Metabolism The Third People's Hospital of Qingdao Qingdao China Shandong Academy of Sciences Science and Technology Services Platform (Shandong Academy of Sciences Foreign Students Pioneer Park) Jinan China Shandong Provincial Maternal and Child Health Care Hospital Affiliated to Qingdao University Jinan China Department of Endocrinology Qingdao Municipal Hospital (Group) Qingdao China Department of Endocrinology The Eighth People's Hospital of Qingdao Qingdao China Department of Endocrinology Qilu Hospital of Shandong University (Qingdao) Qingdao China State Key Laboratory of Microbial Technology Shandong University Qingdao China CAS Key Laboratory of Computational Biology Bio-Med Big Data Center Shanghai Institute of Nutrition and Health University of Chinese Academy of Sciences Chinese Academy of Sciences Shanghai China Department of Endocrinology & Geriatrics Shandong Provincial Hospital Affiliated to Shandong First Medical University Jinan China

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Distributed Local Bayesian Network for Gene Regulatory Network Reconstruction

Distributed Local Bayesian Network for Gene Regulatory Netwo...

引用

International Conference on big data Computing and Communications (bigCOM)

作者： Luxuan Qu Zhiqiong Wang Yueyang Huo Yuezhou Zhou Junchang Xin Wei Qian College of Medicine and Biological Information Engineering Northeastern University Shenyang China College of Medicine and Biological Information Engineering Northeastern University Neusoft Research of Intelligent Healthcare Technology Co. Ltd. Shenyang China School of Computer Science and Engineering Key Laboratory of Big Data Management and Analytics (Liaoning Province) Northeastern University Shenyang China College of Engineering The University of Texas at El Paso El Paso USA

ISBN: (数字)9781728182759

ISBN: (纸本)9781728182766

Gene regulatory network provides an effective way to study functional genomes. Reconstruction of gene regulatory network can better help us to reveal the regulatory relationship and complex mechanism between genes, thus exploring the essence of biological systems and lives. At present, the modeling methods of gene regulatory network either solve the problem of accuracy or scale of gene regulatory network by optimizing the model or combining various models. However, with the continuous increase of network scale and the computational complexity, the reconstruction of the network has exceeded the ability of single machine. Thus, we presented the Distributed Local Bayesian Network (D-LBN) method based on MapReduce framework to solve this problem. D-LBN is based on LBN algorithm which uses mutual information method, k-nearest neighbor algorithm, Bayesian network model and conditional mutual information method to reconstruct gene regulatory network. D-LBN realizes distributed computing using MapReduce framework at the step of regulatory direction learning with Bayesian network model to achieve the purpose of reconstructing large-scale gene regulatory network. Experiments based on two scales of dataset is done to verify the performance of D-LBN in reconstructing gene regulatory network at different scales. The results show that D-LBN is consistent with LBN in evaluation index and much more efficient than LBN on large-scale network reconstruction. And the scale of the network that can be reconstructed is also greatly improved.

关键词： Bayes methods Computational modeling Mutual information Mathematical model Biological system modeling Entropy

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Structured Information Extraction of Pathology Reports with Attention-based Graph Convolutional Network

Structured Information Extraction of Pathology Reports with ...

引用

IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

作者： Jialun Wu Kaiwen Tang Haichuan Zhang Chunbao Wang Chen Li School of Computer Science and Technology Xi’an Jiaotong University Xi’an Shaanxi China National Engineering Lab for Big Data Analytics Xi’an Jiaotong University Xi’an Shaanxi China Shaanxi Province Key Laboratory of Satellite and Terrestrial Network Tech.R&D Xi’an Jiaotong University Xi’an Shaanxi China School of Computer Science and Technology Qian Xuesen College Xi’an Jiaotong University Xi’an Shaanxi China the First Affiliated Hospital of Xi’an Jiaotong University Xi’an Shaanxi China

ISBN: (数字)9781728162157

ISBN: (纸本)9781728162164

Electronic medical data contains biochemical, imaging, pathological information during diagnosis and treatment. The pathology report is a kind of highly liberalized unstructured textual data, which is the basis and gold standard of cancer diagnosis and is very important for the prognosis and treatment of patients. The application of information extraction technology to pathological reports can obtain structured data that can be understood and analyzed by computers, helping pathologists make appropriate decisions. In this work, we proposed an attention-based graph convolutional network (GCN) for converting unstructured pathological reports into a structured form suitable for computer analysis to improve the current pathologist's workflow, collected medical data from different platforms, and provided more accurate assistance for diagnosis and treatment. We used pathology reports data from TCGA (The Cancer Genome Atlas) database with fine-grained annotations on 3632 pathology reports including four types of cancers. Our method performs better in our pathology report dataset with higher F1 score than traditional methods and deep learning methods. The results indicate that our method is robust, thus may work with other types of cancer pathology report.

关键词： Pathology Cancer Task analysis Annotations Information retrieval Medical diagnostic imaging data mining

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A Wavelet-CNN-LSTM Model for Tailings Pond Risk Prediction

arXiv

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arXiv 2020年

作者： Yang, Jun Li, Qing Sun, Yixuan Wang, Wei Li, Linchao Wang, Xuwei Jia, Shengyao Tong, Renyuan National and Local Joint Engineering research center for Disaster Monitoring Technologies and Instruments China Jiliang University Hangzhou310051 China Zhejiang Provincial Key Laboratory of Intelligent Manufacturing Quality Big Data Traceability Analysis and Application China Jiliang University Hangzhou310051 China Zhejiang PeckerAI Technology. Ltd Hangzhou310018 China College of Computer Science and Technology Zhejiang University Hangzhou310027 China

Tailings ponds are places for storing industrial waste. The saturation line is the key factor of quantifying the safety of tailings pond. Existing saturation line time-series prediction methods are mainly based on statistical models or shallow machine learning models. Although these models aim to capture the time dependence of the sequence data, the channel and temporal are even unavailable in principle. In this paper, we presents a two-stage forecasting method, which embeds the channel and temporal attention into a hybrid CNN-LSTM model to predict the saturation line. In the first stage, the discrete wavelet transform (DWT) is applied to capture the refined sequence information. In the second stage, the CNN-LSTM model is utilized to learn the basic spatial and temporal features in the time series. Furthermore, the channel and temporal attention model are embedded into CNN-LSTM model to enhance the feature extracting ability in channel and temporal dimension. Consequently, our proposed model is shown to outperform classic models on five real-world datasets. Copyright © 2020, The Authors. All rights reserved.

关键词： Forecasting

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