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arXiv 2024年

作者： Wang, Sifan Seidman, Jacob H. Sankaran, Shyam Wang, Hanwen Pappas, George J. Perdikaris, Paris Institution for Foundation of Data Science Yale University United States Graduate Program in Applied Mathematics and Computational Science University of Pennsylvania United States Department of Mechanical Engineering and Applied Mechanics University of Pennsylvania United States Department of Electrical and Systems Engineering University of Pennsylvania United States

Operator learning, which aims to approximate maps between infinite-dimensional function spaces, is an important area in scientific machine learning with applications across various physical domains. Here we introduce the Continuous Vision Transformer (CViT), a novel neural operator architecture that leverages advances in computer vision to address challenges in learning complex physical systems. CViT combines a vision transformer encoder, a novel grid-based coordinate embedding, and a query-wise cross-attention mechanism to effectively capture multi-scale dependencies. This design allows for flexible output representations and consistent evaluation at arbitrary resolutions. We demonstrate CViT’s effectiveness across a diverse range of partial differential equation (PDE) systems, including fluid dynamics, climate modeling, and reaction-diffusion processes. Our comprehensive experiments show that CViT achieves state-of-the-art performance on multiple benchmarks, often surpassing larger foundation models, even without extensive pretraining and roll-out fine-tuning. Taken together, CViT exhibits robust handling of discontinuous solutions, multi-scale features, and intricate spatio-temporal dynamics. Our contributions can be viewed as a significant step towards adapting advanced computer vision architectures for building more flexible and accurate machine learning models in the physical sciences. All data and code are publicly available at https://***/PredictiveIntelligenceLab/cvit. © 2024, CC BY-NC-SA.

关键词： Computer vision

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Synthetic helicoidal rotation of a quasielectrostatic ring resonator for ultrabroadband magnet-free nonreciprocity

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Physical Review Applied 2024年第6期22卷 064020-064020页

作者： Aravind Nagulu Ahmed Mekawy Mykhailo Tymchenko Dimitrios Sounas Harish Krishnaswamy Andrea Alù Department of Electrical and Systems Engineering Washington University in St. Louis St. Louis Missouri 63130 USA Photonics Initiative Advanced Science Research Center City University of New York New York New York 10031 USA Department of Electrical and Computer Engineering The University of Texas at Austin Austin Texas 78712 USA Department of Electrical Engineering Wayne State University Detroit Michigan 48202 USA Department of Electrical Engineering Columbia University New York New York 10027 USA Physics Program Graduate Center City University of New York New York New York 10016 USA

Suitably tailored forms of spatiotemporal modulation in electronic circuit networks have been recently employed to overcome fundamental challenges in modern electronic systems, including breaking reciprocity, squeezing the footprint of high-Q resonators, and overcoming the delay-bandwidth limit. Rotating patterns of temporal modulations have been used to synthesize angular momentum, which replaces magnetic bias to break reciprocity in integrated circuits. However, this approach is limited by trade-offs between modulation speed, footprint, and bandwidth of operation. Rotating switching patterns in commutated capacitor networks also enables compact filters and quasielectrostatic wave propagation, overcoming the delay-bandwidth limit. In this paper, we combine these mechanisms in an integrated-circuit ring that synthetically rotates in two dimensions, realizing an effective helicoidal motion that provides ultrabroadband quasielectrostatic nonreciprocal responses fitting within a theoretically infinitesimal size. We also analyze the impact of modulation signal noise on time-modulated nonreciprocal components and unveil the role of a dynamic noise mechanism based on which the noise level increases in the presence of a strong signal passing through the component, along with methods to mitigate this effect. We experimentally verify these principles in a three-port integrated circulator based on a 65-nm CMOS process that operates from dc to 1 GHz with a miniaturization factor of 2 × 106.

关键词： Metamaterials Non-reciprocal transmission Photonics Topolectrical circuits

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Annotating TSSs in Multiple Cell Types Based on DNA Sequence and RNA-seq Data via DeeReCT-TSS

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Genomics, Proteomics & Bioinformatics 2022年第5期20卷 959-973页

作者： Juexiao Zhou Bin Zhang Haoyang Li Longxi Zhou Zhongxiao Li Yongkang Long Wenkai Han Mengran Wang Huanhuan Cui Jingjing Li Wei Chen Xin Gao Computer Science Program ComputerElectrical and Mathematical Sciences and Engineering DivisionKing Abdullah University of Science and TechnologyThuwal 23955-6900Saudi Arabia Computational Bioscience Research Center King Abdullah University of Science and TechnologyThuwal 23955-6900Saudi Arabia Department of Biology School of Life SciencesSouthern University of Science and TechnologyShenzhen 518055China Shenzhen Key Laboratory of Gene Regulation and Systems Biology School of Life SciencesSouthern University of Science and TechnologyShenzhen 518055China Academy for Advanced Interdisciplinary Studies Southern University of Science and TechnologyShenzhen 518055China

The accurate annotation of transcription start sites(TSSs)and their usage are critical for the mechanistic understanding of gene regulation in different biological *** fulfill this,specific high-throughput experimental technologies have been developed to capture TSSs in a genome-wide manner,and various computational tools have also been developed for in silico prediction of TSSs solely based on genomic *** of these computational tools cast the problem as a binary classification task on a balanced dataset,thus resulting in drastic false positive predictions when applied on the genome ***,we present Dee Re CT-TSS,a deep learningbased method that is capable of identifying TSSs across the whole genome based on both DNA sequence and conventional RNA sequencing *** show that by effectively incorporating these two sources of information,Dee Re CT-TSS significantly outperforms other solely sequence-based methods on the precise annotation of TSSs used in different cell ***,we develop a meta-learning-based extension for simultaneous TSS annotations on 10 cell types,which enables the identification of cell type-specific ***,we demonstrate the high precision of DeeReCT-TSS on two independent datasets by correlating our predicted TSSs with experimentally defined TSS chromatin *** source code for Dee Re CT-TSS is available at https://github.-com/Joshua Chou2018/Dee Re CT-TSS_release and https://***/biocode/tools/BT007316.

关键词： Transcription start site Machine learning Deep learning Meta-learning RNA sequencing

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Beyond Distribution Shift: Spurious Features Through the Lens of Training Dynamics

arXiv

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arXiv 2023年

作者： Murali, Nihal Puli, Aahlad Yu, Ke Ranganath, Rajesh Batmanghelich, Kayhan Intelligent Systems Program University of Pittsburgh United States Department of Computer Science New York University United States Department of Electrical and Computer Engineering Boston University United States

Deep Neural Networks (DNNs) are prone to learning spurious features that correlate with the label during training but are irrelevant to the learning problem. This hurts model generalization and poses problems when deploying them in safety-critical applications. This paper aims to better understand the effects of spurious features through the lens of the learning dynamics of the internal neurons during the training process. We make the following observations: (1) While previous works highlight the harmful effects of spurious features on the generalization ability of DNNs, we emphasize that not all spurious features are harmful. Spurious features can be "benign" or "harmful" depending on whether they are "harder" or "easier" to learn than the core features for a given model. This definition is model and dataset dependent. (2) We build upon this premise and use instance difficulty methods (like Prediction Depth (Baldock et al., 2021)) to quantify "easiness" for a given model and to identify this behavior during the training phase. (3) We empirically show that the harmful spurious features can be detected by observing the learning dynamics of the DNN’s early layers. In other words, easy features learned by the initial layers of a DNN early during the training can (potentially) hurt model generalization. We verify our claims on medical and vision datasets, both simulated and real, and justify the empirical success of our hypothesis by showing the theoretical connections between Prediction Depth and information-theoretic concepts like V-usable information (Ethayarajh et al., 2021). Lastly, our experiments show that monitoring only accuracy during training (as is common in machine learning pipelines) is insufficient to detect spurious features. We, therefore, highlight the need for monitoring early training dynamics using suitable instance difficulty metrics. © 2023, CC BY.

关键词： Deep neural networks

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Diversity and Suitability of the State-of-the-Art Wearable and Wireless EEG systems Review

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IEEE Journal of Biomedical and Health Informatics 2023年第8期27卷 3830-3843页

作者： He, Congying Chen, Yu-Yi Phang, Chun-Ren Stevenson, Cory Chen, I-Ping Jung, Tzyy-Ping Ko, Li-Wei Institute of Bioinformatics and Systems Biology National Yang Ming Chiao Tung University Hsinchu30010 Taiwan Institute of Applied Arts National Yang Ming Chiao Tung University Hsinchu30010 Taiwan International Ph.D. Program in Interdisciplinary Neuroscience National Yang Ming Chiao Tung University Hsinchu30010 Taiwan Institute for Neural Computation and Institute of Engineering in Medicine University of California San DiegoCA90093 United States National Yang Ming Chiao Tung University Hsinchu30010 Taiwan Institute of Electrical and Control Engineering Department of Electronics and Electrical Engineering Department of Biological Science and Technology National Yang Ming Chiao Tung University Hsinchu30010 Taiwan Department of Biomedical Science and Environment Biology Drug Development and Value Creation Research Center Kaohsiung Medical University Kaohsiung80708 Taiwan

Wireless electroencephalography (EEG) systems have been attracting increasing attention in recent times. Both the number of articles discussing wireless EEG and their proportion relative to general EEG publications have increased over years. These trends indicate that wireless EEG systems could be more accessible to researchers and the research community has recognized the potential of wireless EEG systems. To explore the development and diverse applications of wireless EEG systems, this review highlights the trends in wearable and wireless EEG systems over the past decade and compares the specifications and research applications of the major wireless systems marketed by 16 companies. For each product, five parameters (number of channels, sampling rate, cost, battery life, and resolution) were assessed for comparison. Currently, these wearable and portable wireless EEG systems have three main application areas: consumer, clinical, and research. To address this multitude of options, the article also discussed the thought process to find a suitable device that meets personalization and use cases specificities. These investigations suggest that low-price and convenience are key factors for consumer applications, wireless EEG systems with FDA or CE-certification may be more suitable for clinical settings, and devices that provide raw EEG data with high-density channels are important for laboratory research. This article presents an overview of the current state of the wireless EEG systems specifications and possible applications and serves as a guide point as it is expected that more influential and novel research will cyclically promote the development of such EEG systems. © 2023 IEEE.

关键词： Electroencephalography

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Enhanced Prognostics and Health Management in Automated Driving systems: Using Graph Neural Networks to Recognize Operational Contexts

Enhanced Prognostics and Health Management in Automated Driv...

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Prognostics and System Health Management Conference (PHM)

作者： Peng Su Yeqi Wang Conglei Xiang Erik Wendel Madhav Mishra DeJiu Chen Department of Engineering Design Mechatronics Division KTH Royal Institute of Technology Stockholm Sweden Embedded Systems Master Program of Electrical Engineering and Computer Science (EECS) School KTH Royal Institute of Technology Stockholm Sweden Digital Systems Division RISE Research Institutes of Sweden Gothenburg Sweden

ISBN: (数字)9798350360585

ISBN: (纸本)9798350360592

Prognostics and health management (PHM) is an engineering discipline that aims to maintain system behaviour and function and ensure mission success, safety and effectiveness. Addressing the challenges in prognostics and health management for modern intelligent systems, especially automated driving systems, is complex due to the contextual nature of faults. This complexity necessitates a thorough understanding of spatial, and temporal conditions, and relationships within operational scenarios and life-cycle stages. This paper introduces a framework designed to automatically recognize driving scenarios in automated driving systems using graph neural networks (GNNs). The framework extracts relational data from image frames, constructing graph-based models and transforming unstructured sensory data into structured data with diverse node types and relationships. A specific graph neural network processes the graph model to reveal and detect operational conditions and relationships. The proposed framework is evaluated using the KITTI dataset, demonstrating superior performance compared to conventional feed-forward networks such as MLP, particularly in handling relational data.

关键词： Graph neural networks Data models Safety Complexity theory Data mining Prognostics and health management Intelligent systems

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Future Glycemic Events Prediction Model Based On Artificial Neural Network

Future Glycemic Events Prediction Model Based On Artificial ...

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2022 International Conference on Innovation and Intelligence for Informatics, Computing, and Technologies, 3ICT 2022

作者： Syafrudin, Muhammad Alfian, Ganjar Fitriyani, Norma Latif Hadibarata, Tony Rhee, Jongtae Anshari, Muhammad Sejong University Department of Artificial Intelligence Seoul Korea Republic of Universitas Gadjah Mada Department of Electrical Engineering and Informatics Vocational College Yogyakarta Indonesia Sejong University Department of Data Science Seoul Korea Republic of Curtin University Environmental Engineering Program Miri Malaysia Dongguk University Department of Industrial and Systems Engineering Seoul Korea Republic of Universiti Brunei Darussalam School of Business and Economics Brunei

ISBN: (数字)9781665451932

ISBN: (纸本)9781665451932

Predicting future glycemic events such as hypoglycemia, hyperglycemia, and normal for type 1 diabetes (T1D) remains a significant and challenging issue. In this study, an artificial neural network (ANN)-based model is proposed to predict the future glycemic events of T1D patients. We utilized five T1D patient datasets to build the models and predict future glycemic events with a prediction horizon (PH) of 30 and 60 minutes ahead of time. We applied the data preprocessing method based on the sliding window approach by sliding the blood glucose time-series data from the past 60 minutes (the last 12 data points) as input and using the next 30 and 60 minutes (the next 6 and 12-th data points) as output. All the numeric blood glucose output data are then transformed into a multi-class classification label, such as hypoglycemia, hyperglycemia, and normal. Our proposed model is then used to learn and create the prediction model from the preprocessed blood glucose dataset. Four performance metrics such as accuracy, precision, recall, and f-1 score were utilized to measure the performance of the classification models used in this study, such as Naïve Bayes (NB), Decision Tree (DT), Support Vector Machine (SVM), and K-Nearest Neighbour (KNN). The results showed that our proposed ANN-based model performed better at predicting future glycemic events than other models, with an average accuracy, precision, recall, and f-1 score of 88.649%, 76.661%, 71.731%, 72.609%, and 83.364%, 60.437%, 61.345%, 60.62% for the PH of 30 and 60 minutes, respectively. As a result, knowing this future glycemic event sooner can help patients avoid potentially dangerous conditions and can eventually be used to improve diabetes management. © 2022 IEEE.

关键词： Decision trees

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Resilience of Data-Driven Cyberattack Detection systems in Smart Power Grids

Resilience of Data-Driven Cyberattack Detection Systems in S...

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European Signal Processing Conference (EUSIPCO)

作者： Abdulrahman Takiddin Rachad Atat Hayat Mbayed Muhammad Ismail Erchin Serpedin Department of Electrical and Computer Engineering Florida State University Tallahassee FL USA Electrical and Computer Engineering Program Texas A&M University at Qatar Doha Qatar Center for Advanced Power Systems Florida State University Tallahassee FL USA Department of Computer Science Tennessee Technological University Cookeville TN USA Department of Electrical and Computer Engineering Texas A&M University College Station TX USA

ISBN: (数字)9789464593617

ISBN: (纸本)9798331519773

Data communications within the smart power grid components are susceptible to cyberattacks due to the inter-connected nature of the grid and reliance on communication networks. Such cyberattacks can exploit the integrity of the exchanged data and result in operational instability. Existing data-driven cyberattack detection systems (CDSs) are proposed in the literature but their effectiveness is only verified against one type of cyberattacks. In reality, a smart grid system could encounter more than one attack type at once. Thus, in this paper, we investigate the resilience of state-of-the-art data-driven CDSs against replay false data injection, adversarial evasion, and adversarial data poisoning attacks on a realistic IEEE 118-bus system model. It turns out that a convolutional recurrent graph autoencoder-based CDS offers an attack detection rate of 96 – 97.5%, which outperforms other machine learning and deep learning-based data-driven CDSs by 16 – 54% since it captures the recurrent and spatial aspects of the data without being trained on attack data.

关键词： Deep learning Europe Feature extraction Graph neural networks Data models Smart grids Reliability Computer crime Unsupervised learning Resilience

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A General Framework for Clustering and Distribution Matching with Bandit Feedback

arXiv

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arXiv 2024年

作者： Yavas, Recep Can Huang, Yuqi Tan, Vincent Y.F. Scarlett, Jonathan Descartes Program CNRS@CREATE 138602 Singapore Department of Information Systems and Analytics School of Computing National University of Singapore 119077 Singapore Department of Mathematics Department of Electrical and Computer Engineering National University of Singapore 119077 Singapore Department of Computer Science Department of Mathematics Institute of Data Science National University of Singapore 119077 Singapore

We develop a general framework for clustering and distribution matching problems with bandit feedback. We consider a K-armed bandit model where some subset of K arms is partitioned into M groups. Within each group, the random variable associated to each arm follows the same distribution on a finite alphabet. At each time step, the decision maker pulls an arm and observes its outcome from the random variable associated to that arm. Subsequent arm pulls depend on the history of arm pulls and their outcomes. The decision maker has no knowledge of the distributions of the arms or the underlying partitions. The task is to devise an online algorithm to learn the underlying partition of arms with the least number of arm pulls on average and with an error probability not exceeding a pre-determined value δ. Several existing problems fall under our general framework, including finding M pairs of arms, odd arm identification, and N-ary clustering of K arms belong to our general framework. We derive a non-asymptotic lower bound on the average number of arm pulls for any online algorithm with an error probability not exceeding δ. Furthermore, we develop a computationally-efficient online algorithm based on the Track-and-Stop method and Frank–Wolfe algorithm, and show that the average number of arm pulls of our algorithm asymptotically matches that of the lower bound. Our refined analysis also uncovers a novel bound on the speed at which the average number of arm pulls of our algorithm converges to the fundamental limit as δ *** Codes 68T05 Copyright © 2024, The Authors. All rights reserved.

关键词： Clustering algorithms

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What Role Do Aggregators Play in Power System Security and Resilience?

What Role Do Aggregators Play in Power System Security and R...

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Resilience Week (RWS)

作者： Reiko Matsuda-Dunn Laura Leddy Eliza Hotchkiss Mukesh Gautam Michael Abdelmalak National Renewable Energy Laboratory Golden CO USA Advanced Energy Systems PhD Program Colorado School of Mines Colorado School of Mines Golden CO USA Department of Electrical and Biomedical Engineering University of Nevada at Reno Reno NV USA

Barriers to the participation of distributed energy resources (DERs) in wholesale electricity markets have limited the use of DERs for power system security and resilience. In September 2020, the Federal Energy Regulatory Commission (FERC) approved an order to reduce these barriers. FERC Order No. 2222 enables the participation of DER aggregators in wholesale electricity markets. DERs include renewable generation and technologies that support the integration of renewable generation by increasing grid flexibility and resilience. Requiring wholesale energy markets to allow DER aggregator participation provides a path for DERs to become competitive in these markets. As the contribution from aggregated DERs continues to increase, the aggregator's role in supporting grid security and resilience will become more critical. This paper reviews work that demonstrates how DER aggregators can provide resilience support through technical capabilities, operational strategies, and secure communication architectures. Socioeconomic influences and impacts of aggregators, including implications for social resilience, are presented. In surveying the current state-of-the-art across different but interconnected topics, we illustrate how aggregators can be power system participants that enhance grid security. There is no one-size-fits-all approach to enhancing resilience in a power grid that includes a growing cohort of DER aggregators, but there are many options for aggregators to contribute to a more resilient and secure power grid.

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