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IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

作者： Chuyun Shen Wenhao Li Ya Zhang Yanfeng Wang Xiangfeng Wang School of Computer Science and Technology East China Normal University Shanghai China School of Data Science The Chinese University of Hong Kong Shenzhen China Cooperative Medianet Innovation Center Shanghai Jiao Tong University Shanghai China Shanghai AI Laboratory Shanghai China

The Segmentation Anything Model (SAM) has recently emerged as a foundation model for addressing image segmentation. Owing to the intrinsic complexity of medical images and the high annotation cost, the medical image segmentation (MIS) community has been encouraged to investigate SAM’s zero-shot capabilities to facilitate automatic annotation. Inspired by the extraordinary accomplishments of the interactive medical image segmentation (IMIS) paradigm, this paper focuses on assessing the potential of SAM’s zero-shot capabilities within the IMIS paradigm to amplify its benefits in the MIS domain. Regrettably, we observe that SAM’s vulnerability to prompt forms (e.g., points, bounding boxes) becomes notably pronounced in IMIS. This leads us to develop a mechanism that adaptively offers suitable prompt forms for human experts. We refer to the mechanism above as temporally-extended prompts optimization (TEPO) and model it as a Markov decision process, solvable through reinforcement learning. Numerical experiments on the standardized benchmark Brats2020 demonstrate that the learned TEPO agent can further enhance SAM’s zero-shot capability in the MIS context.

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Improving Cancer Gene Identification by Enhancing Common Information Between the PPI Network and Gene Functional Association 39

Improving Cancer Gene Identification by Enhancing Common Inf...

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39th Annual AAai Conference on Artificial Intelligence, AAai 2025

作者： Deng, Chao Li, Hongdong Wang, Jianxin School of Computer Science and Engineering Central South University Changsha410083 China Hunan Provincial Key Lab on Bioinformatics Central South University Changsha410083 China Xinjiang Engineering Research Center of Big Data and Intelligent Software School of Software Xinjiang University Urumqi830091 China

ISBN: (纸本)157735897X

Identifying cancer genes is crucial for treatment and understanding pathogenesis. Recent methods typically leverage protein-protein interaction (PPI) networks or gene functional association data from annotated gene sets. There may be some shared neighborhood structure information between these two types of gene association data. While this common information may contain more accurate gene association information, existing methods often overlook this potential. To address this gap, we introduce DISFusion, which integrates multi-omics cancer data, PPI networks, and gene functional associations to identify cancer genes. A key innovation of DISFusion is the cross-view decorrelation loss, which enhances the common information between PPI networks and gene functional associations, thereby improving prediction accuracy. Extensive experiments indicate that DISFusion outperforms state-of-the-art methods and exhibits greater generalization ability. Moreover, analysis of CPTAC pan-cancer proteomic data highlights significant associations between the 30 novel cancer genes predicted by DISFusion and multiple cancer types, underscoring its practical utility. These findings validate the effectiveness of enhancing common information and provide new insights into cancer gene identification. © 2025, Association for the Advancement of Artificial Intelligence (***). All rights reserved.

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Disentangled Cascaded Graph Convolution Networks for Multi-Behavior Recommendation

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ACM Transactions on Recommender Systems 2024年第4期2卷 1-27页

作者： Zhiyong Cheng Jianhua Dong Fan Liu Lei Zhu Xun Yang Meng Wang School of Computer Science and Information Engineering Hefei University of Technology Hefei China Shandong Artificial Intelligence Institute Qilu University of Technology (Shandong Academy of Sciences) Jinan China School of Computing National University of Singapore Singapore Singapore School of Electronic and Information Engineering Tongji University Shanghai China School of Information Science and Technology University of Science and Technology of China Hefei China Key Laboratory of Knowledge Engineering with Big Data Hefei University of Technology Hefei China and Hefei Comprehensive National Science Center Hefei China

Multi-behavioral recommender systems have emerged as a solution to address data sparsity and cold-start issues by incorporating auxiliary behaviors alongside target behaviors. However, existing models struggle to accurately capture varying user preferences across different behaviors and fail to account for diverse item preferences within behaviors. Various user preference factors (such as price or quality) entangled in the behavior may lead to sub-optimization problems. Furthermore, these models overlook the personalized nature of user behavioral preferences by employing uniform transformation networks for all users and items. To tackle these challenges, we propose the Disentangled Cascaded Graph Convolutional Network (Disen-CGCN), a novel multi-behavior recommendation model. Disen-CGCN employs disentangled representation techniques to effectively separate factors within user and item representations, ensuring their independence. In addition, it incorporates a multi-behavioral meta-network, enabling personalized feature transformation across user and item behaviors. Furthermore, an attention mechanism captures user preferences for different item factors within each behavior. By leveraging attention weights, we aggregate user and item embeddings separately for each behavior, computing preference scores that predict overall user preferences for items. Our evaluation of benchmark datasets demonstrates the superiority of Disen-CGCN over state-of-the-art models, showcasing an average performance improvement of 7.07% and 9.00% on respective datasets. These results highlight Disen-CGCN’s ability to effectively leverage multi-behavioral data, leading to more accurate recommendations.

关键词： Multi-Behavior Recommendation disentangled representation learning graph convolutional network multi-behavior recommendation multi-task learning

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FM-FCN:A Neural Network with Filtering Modules for Accurate Vital Signs Extraction

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Research 2025年第1期2024卷 92-106页

作者： Fangfang Zhu Qichao Niu Xiang Li Qi Zhao Honghong Su Jianwei Shuai Department of Physics and Fujian Provincial Key Laboratory for Soft Functional Materials ResearchXiamen UniversityXiamen 361005China National Institute for Data Science in Health and Medicine and State Key Laboratory of Cellular Stress BiologyInnovation Center for Cell Signaling NetworkXiamen UniversityXiamen 361005China Vitalsilicon Technology Co.Ltd. JiaxingZhejiang 314006China School of Computer Science and Software Engineering University of Science and Technology LiaoningAnshan 114051China Yangtze Delta Region Institute of Tsinghua University ZhejiangJiaxing 314006China Wenzhou Institute University of Chinese Academy of SciencesWenzhou 325001China Oujiang Laboratory (Zhejiang Lab for Regenerative Medicine Vision and Brain Health)Wenzhou 325001China

Neural networks excel at capturing local spatial patterns through convolutional modules,but they may struggle to identify and effectively utilize the morphological and amplitude periodic nature of physiological *** this work,we propose a novel network named filtering module fully convolutional network(FM-FCN),which fuses traditional filtering techniques with neural networks to amplify physiological signals and suppress ***,instead of using a fully connected layer,we use an FCN to preserve the time-dimensional correlation information of physiological signals,enabling multiple cycles of signals in the network and providing a basis for signal ***,we introduce the FM as a network module that adapts to eliminate unwanted interference,leveraging the structure of the *** approach builds a bridge between deep learning and signal processing ***,we evaluate the performance of FM-FCN using remote *** results demonstrate that FM-FCN outperforms the second-ranked method in terms of both blood volume pulse(BVP)signal and heart rate(HR)*** substantially improves the quality of BVP waveform reconstruction,with a decrease of 20.23%in mean absolute error(MAE)and an increase of 79.95%in signal-to-noise ratio(SNR).Regarding HR estimation accuracy,FM-FCN achieves a decrease of 35.85%in MAE,29.65%in error standard deviation,and 32.88%decrease in 95%limits of agreement width,meeting clinical standards for HR accuracy *** results highlight its potential in improving the accuracy and reliability of vital sign measurement through high-quality BVP signal *** codes and datasets are available online at https://***/zhaoqi106/FM-FCN.

关键词： physiological signalsin filtering module fully convolutional network fm fcn which vital signs extraction amplify physiological signals convolutional modulesbut neural networks filtering module capturing local spatial patterns

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SDC-UDA: Volumetric Unsupervised Domain Adaptation Framework for Slice-Direction Continuous Cross-Modality Medical Image Segmentation

SDC-UDA: Volumetric Unsupervised Domain Adaptation Framework...

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Conference on computer Vision and Pattern Recognition (CVPR)

作者： Hyungseob Shin Hyeongyu Kim Sewon Kim Yohan Jun Taejoon Eo Dosik Hwang School of Electrical and Electronic Engineering Naver AI Lab Naver Cloud Martinos Center for Biomedical Imaging Harvard Medical School Probe Medical Inc. Department of Oral and Maxillofacial Radiology College of Dentistry Department of Radiology and Center for Clinical Imaging Data Science College of Medicine @Yonsei University Center for Healthcare Robotics Korea Institute of Science and Technology

Recent advances in deep learning-based medical image segmentation studies achieve nearly human-level performance in fully supervised manner. However, acquiring pixel-level expert annotations is extremely expensive and laborious in medical imaging fields. Unsupervised domain adaptation (UDA) can alleviate this problem, which makes it possible to use annotated data in one imaging modality to train a network that can successfully perform segmentation on target imaging modality with no labels. In this work, we propose SDC-UDA, a simple yet effective volumetric UDA framework for Slice-Direction Continuous cross-modality medical image segmentation which combines intra- and inter-slice self-attentive image translation, uncertainty-constrained pseudo-label refinement, and volumetric self-training. Our method is distinguished from previous methods on UDA for medical image segmentation in that it can obtain continuous segmentation in the slice direction, thereby ensuring higher accuracy and potential in clinical practice. We validate SDC-UDA with multiple publicly available cross-modality medical image segmentation datasets and achieve state-of-the-art segmentation performance, not to mention the superior slice-direction continuity of prediction compared to previous studies.

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Syllables to Scenes: Literary-Guided Free-Viewpoint 3D Scene Synthesis from Japanese Haiku

arXiv

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arXiv 2025年

作者： Yu, Chunan Han, Yidong Ding, Chaotao Zang, Ying Zhu, Lanyun Chen, Xinhao Li, Zejian Xu, Renjun Chen, Tianrun School of Information Engineering Huzhou University China College of Computer Science and Technology Zhejiang University China College of Software Engineering Zhejiang University China Center for Data Science Zhejiang University China Technology Co. LTD China Singapore University of Technology and Design Singapore School of Humanities Wenzhou University China

In the era of the metaverse, where immersive technologies redefine human experiences, translating abstract literary concepts into navigable 3D environments presents a fundamental challenge in preserving semantic and emotional fidelity. This research introduces HaikuVerse, a novel framework for transforming poetic abstraction into spatial representation, with Japanese Haiku serving as an ideal test case due to its sophisticated encapsulation of profound emotions and imagery within minimal text. While existing text-to-3D methods struggle with nuanced interpretations, we present a literary-guided approach that synergizes traditional poetry analysis with advanced generative technologies. Our framework centers on two key innovations: (1) Hierarchical Literary-Criticism Theory Grounded Parsing (H-LCTGP), which captures both explicit imagery and implicit emotional resonance through structured semantic decomposition, and (2) Progressive Dimensional Synthesis (PDS), a multi-stage pipeline that systematically transforms poetic elements into coherent 3D scenes through sequential diffusion processes, geometric optimization, and real-time enhancement. Extensive experiments demonstrate that HaikuVerse significantly outperforms conventional text-to-3D approaches in both literary fidelity and visual quality, establishing a new paradigm for preserving cultural heritage in immersive digital spaces. Project website at: https://***/ Copyright © 2025, The Authors. All rights reserved.

关键词： Semantics

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X-Ray-Based Three-Dimensional Shape Reconstruction Method for a Continuum Manipulator

X-Ray-Based Three-Dimensional Shape Reconstruction Method fo...

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Intelligent Robotics and Automatic Control (IRAC), International Conference on

作者： Huayu Zhang Puchen Zhu Xiaoyin Zheng Wenkai Lai Weibing Li Xin Ma Department of Mechanical and Automation Engineering The Chinese University of Hong Kong Hong Kong China Autonomous Driving Center XMotors.ai Inc. Santa Clara CA USA School of Computer Science and Engineering Sun Yat-sen University Guangzhou China Multi-Scale Medical Robotics Center Hong Kong China

ISBN: (数字)9798350389807

ISBN: (纸本)9798350389814

The utilization of visual sensors for three-dimensional (3D) reconstruction of continuum manipulators is a well-established technique, offering essential support for precise control and accurate state estimation. This approach has been widely adopted across various fields, including surgical robotics, bionic systems, and industrial automation. However, the effectiveness of visual sensors is substantially constrained in environments characterized by occlusions or spatial limitations, where accurate reconstruction becomes challenging. To overcome these limitations, we propose an advanced 3D reconstruction method leveraging X-ray imaging, enabling robust shape reconstruction and automated tracking of continuum manipulators, even under occluded conditions. In the X-ray-based 3D shape reconstruction method, the intrinsic and extrinsic parameters of the computed tomography (CT) device are calibrated. Besides, the X-ray images are processed with identification and segmentation, centerline detection and Bézier curve fitting. Finally, the 3D shapes of a continuum manipulator are accomplished by matching the two images acquired from two distinct CT device rotation angles and reconstruction. The measurement experiment has demonstrated the accuracy of 3D shape reconstruction achieved 0.5383 mm. The shape reconstruction experimental results also showed the effectiveness of the X-ray-based 3D shape reconstruction method.

关键词： Image segmentation Three-dimensional displays Accuracy Shape Computed tomography Reconstruction algorithms Sensor phenomena and characterization Manipulators X-ray imaging Image reconstruction

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A data-Centric Accelerator for High-Performance Hypergraph Processing 22

A Data-Centric Accelerator for High-Performance Hypergraph P...

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Proceedings of the 55th Annual IEEE/ACM International Symposium on Microarchitecture

作者： Qinggang Wang Long Zheng Ao Hu Yu Huang Pengcheng Yao Chuangyi Gui Xiaofei Liao Hai Jin Jingling Xue National Engineering Research Center for Big Data Technology and System/Services Computing Technology and System Lab/Cluster and Grid Computing Lab School of Computer Science and Technology Huazhong University of Science and Technology Wuhan China and Zhejiang Lab Hangzhou China National Engineering Research Center for Big Data Technology and System/Services Computing Technology and System Lab/Cluster and Grid Computing Lab School of Computer Science and Technology Huazhong University of Science and Technology Wuhan China School of Computer Science and Engineering University of New South Wales Sydney NSW Australia

ISBN: (纸本)9781665462723

Hypergraph processing has emerged as a powerful approach for analyzing complex multilateral relationships among multiple entities. Past research on building hypergraph systems suggests that changing the scheduling order of bipartite edge tasks can improve the overlap-induced data locality in hypergraph processing. However, due to the complex intertwined connections between vertices and hyperedges, it is almost impossible to find a locality-optimal scheduling order. Thus, these task-centric hypergraph systems often suffer from substantial off-chip *** this paper, we first propose a novel data-centric Load-Trigger-Reduce (LTR) execution model to exploit fully the locality in hypergraph processing. Unlike a task-centric model that loads the required data along with a task, our LTR model invokes tasks as per the data used. Specifically, once the hypergraph data is loaded into the on-chip memory, all of its relevant computation tasks will be triggered simultaneously to output intermediate results, which are finally reduced to update the final results. Our LTR model enables all hypergraph data to be accessed once in each iteration. To fully exploit the LTR performance potential, we further architect an LTR-driven hypergraph accelerator, XuLin, which features with an adaptive data loading mechanism to minimize the loading cost via chunk merging at runtime. XuLin is also equipped with a priority-based differential data reduction scheme to reduce the impact of conflicting updates on performance. We have implemented XuLin both on a Xilinx Alveo U250 FPGA card and using a cycle-accurate simulator. The results show that XuLin outperforms the state-of-the-art hypergraph processing solutions Hygra and ChGraph by 20.47× and 8.77× on average, respectively.

关键词： hypergraph data-centric accelerator

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FedAA: A Reinforcement Learning Perspective on Adaptive Aggregation for Fair and Robust Federated Learning

arXiv

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arXiv 2024年

作者： He, Jialuo Chen, Wei Zhang, Xiaojin National Engineering Research Center for Big Data Technology and System Services Computing Technology and System Lab Cluster and Grid Computing Lab School of Computer Science and Technology Huazhong University of Science and Technology Wuhan430074 China School of Microelectronics and Communication Engineering Chongqing University Chongqing400044 China School of Software Engineering Huazhong University of Science and Technology Wuhan430074 China

Federated Learning (FL) has emerged as a promising approach for privacy-preserving model training across decentralized devices. However, it faces challenges such as statistical heterogeneity and susceptibility to adversarial attacks, which can impact model robustness and fairness. Personalized FL attempts to provide some relief by customizing models for individual clients. However, it falls short in addressing server-side aggregation vulnerabilities. We introduce a novel method called FedAA, which optimizes client contributions via Adaptive Aggregation to enhance model robustness against malicious clients and ensure fairness across participants in non-identically distributed settings. To achieve this goal, we propose an approach involving a Deep Deterministic Policy Gradient-based algorithm for continuous control of aggregation weights, an innovative client selection method based on model parameter distances, and a reward mechanism guided by validation set performance. Empirically, extensive experiments demonstrate that, in terms of robustness, FedAA outperforms the state-of-the-art methods, while maintaining comparable levels of fairness, offering a promising solution to build resilient and fair federated systems. Our code is available at https://***/Gp1g/FedAA. Copyright © 2024, The Authors. All rights reserved.

关键词： Federated learning

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Auction Theory and Game Theory Based Pricing of Edge Computing Resources: A Survey

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IEEE Internet of Things Journal 2025年

作者： Yu, Jiguo Liu, Shun Zou, Yifei Wang, Guijuan Hu, Chunqiang University of Electronic Science and Technology of China School of Information and Software Engineering Chengdu610054 China Qilu University of Technology Big Data Institute Jinan250353 China Qufu Normal University School of Computer Science Shandong Rizhao China Shandong University School of Computer Science and Technology Shandong Qingdao266237 China Key Laboratory of Computing Power Network and Information Security Ministry of Education Shandong Computer Science Center Jinan250353 China Shandong Fundamental Research Center for Computer Science Shandong Provincial Key Laboratory of Computer Networks Jinan250353 China Chongqing University School of Big Data and Software Engineering Chongqing400044 China

The proliferation of Internet of Things (IoT) devices and edge computing applications has heightened the demand for efficient resource allocation and pricing mechanisms. Effective pricing strategies play a crucial role in optimizing resource utilization, reducing latency, and ensuring fair resource distribution among users. Both auction theory and game theory have emerged as fundamental economic frameworks for designing pricing mechanisms in edge computing. This paper presents a comprehensive survey of pricing strategies that leverage both auction and game theory, systematically categorizing existing research based on auction mechanisms and game-theoretic models. Unlike previous surveys that focus solely on auction-based pricing, this work integrates game-theoretic perspectives, providing a holistic analysis of strategic interactions in edge computing resource allocation. Furthermore, we discuss key challenges, emerging trends, and future research directions aimed at enhancing efficiency, fairness, and privacy protection in cloud-edge collaborative computing environments. © 2014 IEEE.

关键词： Mobile edge computing

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