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IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

作者： Keliang Zhao Jovial Niyogisubizo Linxia Xiao Yi Pan Dongqing Wei Didi Rosiyadi Yanjie Wei Shenzhen Key Laboratory of Intelligent Bioinformatics and Center for High Performance Computing Shenzhen Institute of Advanced Technology Chinese Academy of Sciences Shenzhen China College of Computer Science and Control Engineering Shenzhen Institutes of Advanced Technology Chinese Academy of Sciences Shenzhen China State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology Shanghai Jiao Tong University Shanghai China Research Center for Artificial Intelligence and Cybersecurity National Research and Innovation Agency Bandung Indonesia

The precise segmentation and tracking of cells in microscopy image sequences play a pivotal role in biomedical research, facilitating the study of tissue, organ, and organism development. However, manual segmentation and tracking of cells is time-consuming and often require professional experiences. Besides, segmenting cells in the images with a low signal-to-noise ratio remains difficult. While deep learning (DL) has become a common method for cell segmentation, few DL- based methods address concurrent cell segmentation and tracking. In this paper, we propose a novel DL approach featuring graph-based tracking for cell segmentation and tracking in microscopy images. We combine Deeplabv3+ for semantic segmentation and ResNet50 for enhanced feature extraction, enabling comprehensive cell detection and instance segmentation. Post-processing, involving non-maxima suppression and outlier detection, refines predictions and produces final segmentation. The tracking method is based on the relative position of graph nodes to track segmented cells, encompassing cell division and apoptosis. We conduct our experiments on the induced pluripotent stem (iPS) cell datasets, and the results show that the segmentation and tracking performance of our method yields superior performance compared to the benchmark models. More specifically, our approach achieved DET values of 0.955 and 0.913, TRA values of 0.951 and 0.906, and SEG values of 0.690 and 0.665 on two iPS dataset videos, respectively. Additionally, the performance assessment encompasses four real microscopy datasets from the Cell Tracking Challenge (CTC). Our method greatly reduces the cost of manual labeling and labor-intensive costs.

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Crsanet: Class Representations Self-Attention Network for the Segmentation of Thyroid Nodules

SSRN

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SSRN 2023年

作者： Sun, Shiyao Fu, Chong Xu, Sen Wen, Yingyou Ma, Tao School of Computer Science and Engineering Northeastern University Shenyang110819 China Key Laboratory of Intelligent Computing in Medical Image Ministry of Education Northeastern University Shenyang110819 China Engineering Research Center of Security Technology of Complex Network System Ministry of Education China General Hospital of Northern Theatre Command Shenyang110016 China Medical Imaging Research Department Neusoft Research of Intelligent Healthcare Technology Co. Ltd. Shenyang China Dopamine Group Ltd. Auckland1542 New Zealand

Segmenting accurate thyroid nodules in medical ultrasound images is always non-trivial due to the large variation in size, shape and texture of nodules, and also the presence of surrounding tissues and organs with similar intensity values. Existing algorithms solve this by designing multi-scale spatial context modeling modules and introducing the emerging self-attention based paradigm, while failing to learn the class-wise relational context around nodules. To this end, we propose a novel coarse-to-fine framework, namely, CRSANet, which leverages both class-wise relational context and spatial multi-scale context for comprehensive context perception. Specifically, we first introduce the concept of Class Representations, which describe the overall representation of thyroid nodules in ultrasound images from a categorical perspective. Secondly, we propose a backbone-free dual-branch Class Representation Self-Attention Module (CRSA) to refine the coarse segmentation results from segmentation backbones. Concretely, Fine Class Region (FCR) branch is proposed to impose consistency between pixels and their corresponding Class Representations to correct the wrongly classified pixels. Meanwhile, Class Contextual Representation (CCR) branch is introduced to enhance the ability of pixel representations with the corresponding Class Representations. We evaluate the effectiveness and generality of CRSANet using three types of backbone networks. In the experiments, our proposed U-CRSANet achieves a mIoU of 78.86% and 81.35%, an accuracy of 97.11% and 98.63%, a Dice value of 74.26% and 87.57%, respectively, which outperforms most state-of-the-art methods on the public DDTI and TN-SCUI datasets. © 2023, The Authors. All rights reserved.

关键词： Pixels

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Rate-Splitting for Cell-Free Massive MIMO: Performance Analysis and Generative AI Approach

arXiv

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arXiv 2024年

作者： Zheng, Jiakang Zhang, Jiayi Du, Hongyang Zhang, Ruichen Niyato, Dusit Dobre, Octavia A. Ai, Bo The School of Electronic and Information Engineering Beijing Jiaotong University Beijing100044 China The Frontiers Science Center for Smart High-speed Railway System Beijing Jiaotong University Beijing100044 China The Department of Electrical and Electronic Engineering University of Hong Kong Pok Fu Lam Hong Kong The College of Computing and Data Science Nanyang Technological University Singapore Faculty of Engineering and Applied Science Memorial University Canada The State Key Laboratory of Rail Traffic Control and Safety Beijing Jiaotong University Beijing100044 China The Frontiers Science Center for Smart High-speed Railway System China Henan Joint International Research Laboratory of Intelligent Networking and Data Analysis Zhengzhou University Zhengzhou450001 China Research Center of Networks and Communications Peng Cheng Laboratory Shenzhen China

Cell-free (CF) massive multiple-input multiple-output (MIMO) provides a ubiquitous coverage to user equipments (UEs) but it is also susceptible to interference. Rate-splitting (RS) effectively extracts data by decoding interference, yet its effectiveness is limited by the weakest UE. In this paper, we investigate an RS-based CF massive MIMO system, which combines strengths and mitigates weaknesses of both approaches. Considering imperfect channel state information (CSI) resulting from both pilot contamination and noise, we derive a closed-form expression for the sum spectral efficiency (SE) of the RS-based CF massive MIMO system under a spatially correlated Rician channel. Moreover, we propose low-complexity heuristic algorithms based on statistical CSI for power-splitting of common messages and power-control of private messages, and genetic algorithm is adopted as a solution for upper bound performance. Furthermore, we formulate a joint optimization problem, aiming to maximize the sum SE of the RS-based CF massive MIMO system by optimizing the power-splitting factor and power-control coefficient. Importantly, we improve a generative AI (GAI) algorithm to address this complex and non-convexity problem by using a diffusion model to obtain solutions. Simulation results demonstrate its effectiveness and practicality in mitigating interference, especially in dynamic environments. Copyright © 2024, The Authors. All rights reserved.

关键词： Genetic algorithms

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BrainNNExplainer: An interpretable graph neural network framework for brain network based disease analysis

arXiv

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arXiv 2021年

作者： Cui, Hejie Dai, Wei Zhu, Yanqiao Li, Xiaoxiao He, Lifang Yang, Carl Department of Computer Science Emory University Center for Research on Intelligent Perception and Computing Institute of Automation Chinese Academy of Sciences School of Artificial Intelligence University of Chinese Academy of Sciences Department of Computer Science Princeton University Department of Computer Science and Engineering Lehigh University

MSC Codes 68T07, 68T45, 68T20Interpretable brain network models for disease prediction are of great value for the advancement of neuroscience. GNNs are promising to model complicated network data, but they are prone to overfitting and suffer from poor interpretability, which prevents their usage in decision-critical scenarios like healthcare. To bridge this gap, we propose BrainNNExplainer, an interpretable GNN framework for brain network analysis. It is mainly composed of two jointly learned modules: a backbone prediction model that is specifically designed for brain networks and an explanation generator that highlights disease-specific prominent brain network connections. Extensive experimental results with visualizations on two challenging disease prediction datasets demonstrate the unique interpretability and outstanding performance of BrainNNExplainer. Copyright © 2021, The Authors. All rights reserved.

关键词： Graph neural networks

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Lithium battery SOH prediction based on frequency-enhanced cross variable for short-term dependency recognition framework

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Measurement science and Technology 2025年第6期36卷

作者： Xue, Tao Li, Xiang Xi, Long Zhang, JiaYi Shaanxi Key Laboratory of Clothing Intelligence and State-Province Joint Engineering Research Center of Advanced Networking and Intelligent Information Services School of Computer Science Xi’an Polytechnic University Shaanxi Xi’an710048 China

Accurate and stable predictions of the state-of-health (SOH) of lithium-ion batteries are essential for effective battery management and extending battery lifespan. Two major issues exist in current lithium battery capacity prediction models. First the original data captured from temperature, voltage, and current sensors contains a large number of noises, which negatively impacts prediction accuracy. Second, the SOH of lithium-ion batteries is significantly influenced by factors such as current temperature, charge and discharge rates, and voltage. These rapid changing factors can be captured more effectively using short-term dependence rather than long-term dependence. However, the short-term dependence of capacity degradation is not fully captured, and the coupling relationships among multivariable sequences, along with the inaccurate capacity predictions resulting from frequency information, are not adequately addressed. In this paper, we propose a frequency-domain enhanced trans-variate short-term dependence recognition framework, FE-STDR, to solve these two problems and predict the SOH of lithium batteries. The FE-STDR framework comprises two modules including stacked denoising autoencoder (SDAE) and FEformer. SDAE module removes noise captured during the original battery data acquisition and capacity cycles, automatically extracting high-level features to capture complex battery state patterns through its multi-layer denoising structures. The FEformer module introduces a frequency enhanced channel attention mechanism to integrate frequency information into the framework while considering short-term frequency dependence in lithium battery data. The results indicate that the root mean square error of the proposed framework is reduced by 6.53%, 11.78%, and 7.34%, respectively, compared to the baseline models: long short-term memory, Transformer, and AE-GRU. The prediction accuracy proves that the proposed FE-STDR is superior, enabling accurate forecasting of the d

关键词： Lithium-ion batteries

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Fusion Tree Network for RGBT Tracking

Fusion Tree Network for RGBT Tracking

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IEEE Conference on Advanced Video and Signal Based Surveillance (AVSS)

作者： Zhiyuan Cheng Andong Lu Zhang Zhang Chenglong Li Liang Wang School of Computer Science and Technology Anhui University Hefei China Center for Research on Intelligent Perception and Computing NLPR CASIA Beijing China University of Chinese Academy of Sciences Beijing China Anhui Provincial Key Laboratory of Multimodal Cognitive Computation Hefei China School of Artificial Intelligence Anhui University Hefei China

ISBN: (数字)9781665463829

ISBN: (纸本)9781665463836

RGBT tracking is often affected by complex scenes (i.e., occlusions, scale changes, noisy background, etc). Existing works usually adopt a single-strategy RGBT tracking fusion scheme to handle modality fusion in all scenarios. However, due to the limitation of fusion model capacity, it is difficult to fully integrate the discriminative features between different modalities. To tackle this problem, we propose a Fusion Tree Network (FTNet), which provides a multi-strategy fusion model with high capacity to efficiently fuse different modalities. Specifically, we combine three kinds of attention modules (i.e., channel attention, spatial attention, and location attention) in a tree structure to achieve multi-path hybrid attention in the deeper convolutional stages of the object tracking network. Extensive experiments are performed on three RGBT tracking datasets, and the results show that our method achieves superior performance among state-of-the-art RGBT tracking models.

关键词： Fuses Convolution Surveillance Aggregates Benchmark testing Object tracking Noise measurement

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A method for detecting floating objects on water based on edge computing

A method for detecting floating objects on water based on ed...

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IEEE International Symposium on Broadband Multimedia Systems and Broadcasting (BMSB)

作者： He Li Shuaipeng Yang Jinjiang Liu Honglin Fang Zhumu Fu Rui Zhang Huimei Jia Lianmeng Lv Henan Costar Group Co. Ltd Nanyang Henan China College of Information Engineering Henan University of Science and Technology Luoyang Henan China Henan Engineering Research Center of Intelligent Processing for Big Data of Digital Image School of Computer Science and Technology Nanyang Normal University Nanyang China State Key Laboratory of Networking and Switching Technology Beijing University of Posts and Telecommunication Beijing China Xi'an Hengpin Electronic Technology Co. Ltd Xi’an China

With the development and application of computer vision, many target detection networks are applied to the detection of floating objects in rivers. For the detection problems such as small targets easily missed and misdetected in water surface floating object detection tasks and difficult to deploy models. An edge computing-oriented approach to river floater detection is proposed. First, a four-fold down-sampling feature layer is added to the YOLOv5 network which enhances more target detail features and improves the detection capability of small objects. Second, CA (Coordinate Attention) is added to the Backbone to suppress background noise interference, and different pooling is used to accommodate different hierarchical features. Then, a bilinear interpolation method is adopted for up-sampling to avoid the loss of small object features. Design a data enhancement algorithm for small targets based on Mosaic to increase the number of small objects and enrich the training background. Finally, for the edge computing architecture platform, the channel pruning algorithm is used to prune and compress the model structure to adapt to the computing capability of edge devices. The experimental results show that the method can effectively improve the detection capability of the network for floating objects on the water surface. The detection accuracy can reach 93.6%, and the detection speed can be maintained at 36 frames per second, which can achieve high-precision real-time detection of floating objects on the water surface.

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Structure-aware hard negative mining for heterogeneous graph contrastive learning

arXiv

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arXiv 2021年

作者： Zhu, Yanqiao Xu, Yichen Cui, Hejie Yang, Carl Liu, Qiang Wu, Shu Center for Research on Intelligent Perception and Computing Institute of Automation Chinese Academy of Sciences China School of Artificial Intelligence University of Chinese Academy of Sciences China School of Computer Science Beijing University of Posts and Telecommunications China Department of Computer Science Emory University

Recently, heterogeneous Graph Neural Networks (GNNs) have become a de facto model for analyzing HGs, while most of them rely on a relative large number of labeled data. In this work, we investigate Contrastive Learning (CL), a key component in self-supervised approaches, on HGs to alleviate the label scarcity problem. We first generate multiple semantic views according to metapaths and network schemas. Then, by pushing node embeddings corresponding to different semantic views close to each other (positives) and pulling other embeddings apart (negatives), one can obtain informative representations without human annotations. However, this CL approach ignores the relative hardness of negative samples, which may lead to suboptimal performance. Considering the complex graph structure and the smoothing nature of GNNs, we propose a structure-aware hard negative mining scheme that measures hardness by structural characteristics for HGs. By synthesizing more negative nodes, we give larger weights to harder negatives with limited computational overhead to further boost the performance. Empirical studies on three real-world datasets show the effectiveness of our proposed method. The proposed method consistently outperforms existing state-of-the-art methods and notably, even surpasses several supervised counterparts. Copyright © 2021, The Authors. All rights reserved.

关键词： Graph neural networks

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Pre-Equalization Aided Grant-Free Massive Access in Massive MIMO System

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IEEE Transactions on Vehicular Technology 2025年

作者： Wang, Yueqing Mei, Yikun Gao, Zhen Wan, Ziwei Ning, Boyu Mi, De Muhaidat, Sami School of Information and Electronics Beijing Institute of Technology Beijing100081 China Beijing Institute of Technology MIIT Key Laboratory of Complex-Field Intelligent Sensing Beijing100081 China Yangtze Delta Region Academy Jiaxing314019 China Beijing Institute of Technology Advanced Technology Research Institute Jinan250307 China University of Electronic Science and Technology of China National Key Laboratory of Wireless Communications Chengdu611731 China Birmingham City University School of Computing and Digital Technology BirminghamB55JU United Kingdom Khalifa University KU 6 G Research Center Department of Computer and Information Engineering Abu Dhabi United Arab Emirates

The spatial diversity and multiplexing advantages of massive multi-input-multi-output (mMIMO) can significantly improve the capacity of massive non-orthogonal multiple access (NOMA) in machine type communications. However, state-of-the-art grant-free massive NOMA schemes for mMIMO systems require accurate estimation of random access channels to perform activity detection and the following coherent data demodulation, which suffers from excessive pilot overhead and access latency. To address this, we propose a pre-equalization aided grant-free massive access scheme for mMIMO systems, where an iterative detection scheme is conceived. Specifically, the base station (BS) firstly activates one of its antennas (i.e., beacon antenna) to broadcast a beacon signal, which facilitates the user equipment (UEs) to perform downlink channel estimation and pre-equalize the uplink random access signal with respect to the channels associated with the beacon antenna. During the uplink transmission stage, the BS detects UEs' activity and data by using the proposed iterative detection algorithm, which consists of three modules: coarse data detection (DD), data-aided channel estimation (CE), and fine DD. In the proposed algorithm, the joint activity and DD is firstly performed based on the signals received by the beacon antenna. Subsequently, the DD is further refined by iteratively performing data-aided CE module and fine DD module using signals received by all BS antennas. Our simulation results demonstrate that the proposed scheme outperforms state-of-the-art mMIMO-based grant-free massive NOMA schemes with the same access latency. © 1967-2012 IEEE.

关键词： Channel estimation

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A Survey of Pretraining on Graphs: Taxonomy, Methods, and Applications

arXiv

引用

arXiv 2022年

作者： Xia, Jun Zhu, Yanqiao Du, Yuanqi Li, Stan Z. School of Engineering Westlake University China Institute of Advanced Technology Westlake Institute for Advanced Study China Center for Research on Intelligent Perception and Computing Institute of Automation Chinese Academy of Sciences China School of Artificial Intelligence University of Chinese Academy of Sciences China Department of Computer Science George Mason University United States

Pre-trained Language Models (PLMs) such as BERT have revolutionized the landscape of natural language processing (NLP). Inspired by their proliferation, tremendous efforts have been devoted to pre-trained graph models (PGMs) recently. Owing to its huge model parameters, PGMs can capture abundant knowledge from massive labeled and unlabeled graph data. The knowledge implicitly encoded in model parameters can benefit various downstream tasks and help to alleviate several fundamental issues of learning on graphs. In this paper, we provide a comprehensive survey for PGMs. We first briefly present the limitations of graph representation learning and thus introduce the motivation for graph pre-training. Next, we systematically categorize existing PGMs based on a taxonomy from five different perspectives including the history, model architectures, pre-training strategies, tunning strategies and applications. Finally, we outline several promising research directions that can serve as a guideline for future studies. Copyright © 2022, The Authors. All rights reserved.

关键词： Taxonomies

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