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Medical Imaging 2025: Computer-Aided Diagnosis

作者： Liu, Huafeng Dowdell, Benjamin Engelder, Todd Pulmano, Zarah Osa, Nicolas Barman, Arko Department of Computer Science Rice University Houston United States Data to Knowledge Lab Rice University Houston United States Department of Electrical and Computer Engineering Rice University Houston United States Department of Statistics Rice University Houston United States

ISBN: (纸本)9781510685925

Glioblastoma is one of the most aggressive and deadliest types of brain cancer, with low survival rates compared to other types of cancer. Analysis of Magnetic Resonance Imaging (MRI) scans is one of the most effective methods for the diagnosis and treatment of brain cancers such as glioblastoma. Accurate tumor segmentation in MRI images is often required for treatment planning and risk assessment of treatment methods. Here, we propose a novel pipeline, Brain Radiology Aided by Intelligent Neural NETworks (BRAINNET), which leverages MaskFormer, a vision transformer model, and generates robust tumor segmentation masks. We use an ensemble of nine predicted segmentation masks generated from three different models separately trained on each of the three orthogonal 2D slice directions (axial, sagittal, and coronal) of a 3D brain MRI volume. Each of the models in the ensemble consists of three modules - a pixel-level module that extracts per-pixel embeddings, a transformer module that generates per-segment embeddings, and a segmentation module that combines these embeddings to generate the segmentation mask. Two different data augmentation strategies were also implemented to improve the performance of the individual models. We trained, tuned hyperparameters, and tested our models on the publicly available UPenn-GBM dataset, consisting of 3D multi-parametric MRI (mpMRI) scans from 611 subjects. We use Dice coefficient (DC) and 95% Hausdorff distance (HD) for evaluating the performance of our models. Our models achieved state-of-the-art results in segmenting all three different tumor regions – tumor core (DC = 0.894, HD = 2.308), whole tumor (DC = 0.891, HD = 3.552), and enhancing tumor (DC = 0.812, HD = 1.608). © 2025 SPIE.

关键词： Magnetoencephalography

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NSPG-Miner: Mining Repetitive Negative Sequential Patterns

arXiv

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arXiv 2025年

作者： Li, Yan Wang, Zhulin Liu, Jing Guo, Lei Fournier-Viger, Philippe Wu, Youxi Wu, Xindong School of Economics and Management Hebei University of Technology Tianjin300401 China School of Artificial Intelligence Hebei University of Technology Tianjin300401 China State Key Laboratory of Reliability and Intelligence of Electrical Equipment Hebei University of Technology Tianjin300401 China College of Computer Science and Software Engineering Shenzhen University Shenzhen518061 China Hebei Key Laboratory of Big Data Computing 300401 China Key Laboratory of Knowledge Engineering with Big Data The Ministry of Education of China Hefei University of Technology Hefei230009 China

Sequential pattern mining (SPM) with gap constraints (or repetitive SPM or tandem repeat discovery in bioinformatics) can find frequent repetitive subsequences satisfying gap constraints, which are called positive sequential patterns with gap constraints (PSPGs). However, classical SPM with gap constraints cannot find the frequent missing items in the PSPGs. To tackle this issue, this paper explores negative sequential patterns with gap constraints (NSPGs). We propose an efficient NSPG-Miner algorithm that can mine both frequent PSPGs and NSPGs simultaneously. To effectively reduce candidate patterns, we propose a pattern join strategy with negative patterns which can generate both positive and negative candidate patterns at the same time. To calculate the support (frequency of occurrence) of a pattern in each sequence, we explore a NegPair algorithm that employs a key-value pair array structure to deal with the gap constraints and the negative items simultaneously and can avoid redundant rescanning of the original sequence, thus improving the efficiency of the algorithm. To report the performance of NSPG-Miner, 11 competitive algorithms and 11 datasets are employed. The experimental results not only validate the effectiveness of the strategies adopted by NSPG-Miner, but also verify that NSPG-Miner can discover more valuable information than the state-ofthe-art algorithms. Algorithms and datasets can be downloaded from https://***/wuc567/PatternMining/tree/master/NSPG-Miner. Copyright © 2025, The Authors. All rights reserved.

关键词： Miners

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Unfolding the Headline: Iterative Self-Questioning for News Retrieval and Timeline Summarization

arXiv

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arXiv 2025年

作者： Wu, Weiqi Huang, Shen Jiang, Yong Xie, Pengjun Huang, Fei Zhao, Hai Department of Computer Science and Engineering Shanghai Jiao Tong University China Tongyi Lab Alibaba Group China Key Laboratory of Shanghai Education Commission for Intelligent Interaction and Cognitive Engineering Shanghai Jiao Tong University China Shanghai Key Laboratory of Trusted Data Circulation and Governance in Web3 China

In the fast-changing realm of information, the capacity to construct coherent timelines from extensive event-related content has become increasingly significant and challenging. The complexity arises in aggregating related documents to build a meaningful event graph around a central topic. This paper proposes CHRONOS - Causal Headline Retrieval for Open-domain News Timeline SummarizatiOn via Iterative Self-Questioning, which offers a fresh perspective on the integration of Large Language Models (LLMs) to tackle the task of Timeline Summarization (TLS). By iteratively reflecting on how events are linked and posing new questions regarding a specific news topic to gather information online or from an offline knowledge base, LLMs produce and refresh chronological summaries based on documents retrieved in each round. Furthermore, we curate Open-TLS, a novel dataset of timelines on recent news topics authored by professional journalists to evaluate open-domain TLS where information overload makes it impossible to find comprehensive relevant documents from the web. Our experiments indicate that CHRONOS is not only adept at open-domain timeline summarization, but it also rivals the performance of existing state-of-the-art systems designed for closed-domain applications, where a related news corpus is provided for summarization. Copyright © 2025, The Authors. All rights reserved.

关键词： Modeling languages

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PEJA:Progressive Energy-Efficient Join Processing for Sensor Networks

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Journal of Computer Science & Technology 2008年第6期23卷 957-972页

作者：赖永炫陈毅隆陈红 School of Information Renmin University of China Key Laboratory of Data Engineering and Knowledge Engineering Ministry of Education

Sensor networks are widely used in many applications to collaboratively collect information from the physical environment. In these applications, the exploration of the relationship and linkage of sensing data within multiple regions can be naturally expressed by joining tuples in these regions. However, the highly distributed and resource-constraint nature of the network makes join a challenging query. In this paper, we address the problem of processing join query among different regions progressively and energy-efficiently in sensor networks. The proposed algorithm PEJA （Progressive Energy-efficient Join Algorithm） adopts an event-driven strategy to output the joining results as soon as possible, and alleviates the storage shortage problem in the in-network nodes. It also installs filters in the joining regions to prune unmatchable tuples in the early processing phase, saving lots of unnecessary transmissions. Extensive experiments on both synthetic and real world data sets indicate that the PEJA scheme outperforms other join algorithms, and it is effective in reducing the number of transmissions and the delay of query results during the join processing.

关键词： progressive join minimal join set in-network processing sensor network

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CovKG: A Covid-19 knowledge Graph for enabling multidimensional analytics on Covid-19 epidemiological data considering spatiotemporal, environmental, health, and socioeconomic aspects

引用

International Journal of Information Management data Insights 2025年第1期5卷

作者： Deb Nath, Rudra Pratap Raihan, S.M. Shafkat Das, Tonmoy Chandro Pedersen, Torben Bach Ghose, Debasish Big Data Information and Knowledge Engineering Lab Department of Computer Science and Engineering University of Chittagong Chattogram 4331 Bangladesh Department of Computer Science Aalborg University Aalborg 9220 Denmark School of Economics Innovation and Technology Kristiania University College State Three Bergen 0153 Norway

The Covid-19 pandemic is influenced by many environmental, health, and socioeconomic aspects such as air pollution, comorbidity, occupation, etc. To better manage future pandemics, decision-makers need comprehensive data on Covid-19 mortality and morbidity. Most Covid-19 data sources focus on spatiotemporal aspects, and existing research often overlook the combined impact of multiple interconnected factors. This study introduces a Covid-19 knowledge Graph (CovKG) derived from 20 data sources, enabling multidimensional analysis of epidemiological data, including time, location, temperature, comorbidity, occupation, and others. CovKG is modeled using RDF, connected to 10,951 external resources, and semantically enriched with data Cube (QB) and QB for OLAP (QB4OLAP) vocabularies to adhere to the FAIR principles and ensure OLAP compatibility. Finally, we perform a qualitative and comparative evaluation and extract statistical insights across multiple dimensions of Covid-19 epidemiology. When assessed, CovKG answers 100% of competency queries, outperforming other data stores that only answer 39%. CovKG and its analytical interface are available at https://***/datasets/CovKG/. © 2025 The Authors

关键词： Covid-19 FAIR principles knowledge Graph Linked data Multidimensional analysis Semantic technology

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GKG-LLM: A Unified Framework for Generalized knowledge Graph Construction

arXiv

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arXiv 2025年

作者： Zhang, Jian Wei, Bifan Qi, Shihao Zhu, Haiping Liu, Jun Lin, Qika School of Computer Science and Technology Xi’an Jiaotong University Xi’an China School of Continuing Education Xi’an Jiaotong University Xi’an China Shaanxi Province Key Laboratory of Big Data Knowledge Engineering Xi’an Jiaotong University Xi’an China National University of Singapore Singapore

The construction of Generalized knowledge Graph (GKG), including knowledge graph, event knowledge graph and commonsense knowledge graph, is fundamental for various natural language processing tasks. Current studies typically construct these types of graph separately, overlooking holistic insights and potential unification that could be beneficial in computing resources and usage perspectives. However, a key challenge in developing a unified framework for GKG is obstacles arising from task-specific differences. In this study, we propose a unified framework for constructing generalized knowledge graphs to address this challenge. First, we collect data from 15 sub-tasks in 29 datasets across the three types of graphs, categorizing them into in-sample, counter-task, and out-of-distribution (OOD) data. Then, we propose a three-stage curriculum learning fine-tuning framework, by iteratively injecting knowledge from the three types of graphs into the Large Language Models. Extensive experiments show that our proposed model improves the construction of all three graph types across in-domain, OOD and counter-task data. Copyright © 2025, The Authors. All rights reserved.

关键词： knowledge graph

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Semi-Supervised Medical Image Segmentation Based on Frequency Domain Aware Stable Consistency Regularization

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Journal of imaging informatics in medicine 2025年 2025 Jan 22页

作者： Yihao Ouyang Peipei Li Haixiang Zhang Xuegang Hu Key Laboratory of Knowledge Engineering with Big Data (the Ministry of Education of China) Hefei University of Technology Hefei 230009 Anhui China. School of Computer Science and Information Engineering Hefei University of Technology Hefei 230009 Anhui China. School of Computer Science and Information Engineering Hefei University of Technology Hefei 230009 Anhui China. peipeili@***. Center for Big Data and Population Health of IHM Anhui Medical University Hefei Anhui China. peipeili@***. Center for Big Data and Population Health of IHM Anhui Medical University Hefei Anhui China. Computer Centre The Second People's Hospital of Hefei Hefei 230011 Anhui China. Anhui Province Key Laboratory of Industry Safety and Emergency Technology Hefei University of Technology Hefei 230009 Anhui China.

With the advancement of deep learning models nowadays, they have successfully applied in the semi-supervised medical image segmentation where there are few annotated medical images and a large number of unlabeled ones. A representative approach in this regard is the semi-supervised method based on consistency regularization, which improves model training by imposing consistency constraints (perturbations) on unlabeled data. However, the perturbations in this kind of methods are often artificially designed, which may introduce biases unfavorable to the model learning in the handling of medical image segmentation. On the other hand, the majority of such methods often overlook the supervision in the Encoder stage of training and primarily focus on the outcomes in the later stages, potentially leading to chaotic learning in the initial phase and subsequently impacting the learning process of the model in the later stages. At the meanwhile, they miss the intrinsic spatial-frequency information of the images. Therefore, in this study, we propose a new semi-supervised medical image segmentation approach based on frequency domain aware stable consistency regularization. Specifically, to avoid the bias introduced by artificially setting perturbations, we first utilize the inherent frequency domain information of images, including both high and low frequencies, as the consistency constraint. Secondly, we incorporate supervision in the Encoder stage of model training to ensure that the model does not fail to learn due to the disruption of the original feature space caused by strong augmentation. Finally, extensive experimentation validates the effectiveness of our semi-supervised approach.

关键词： Consistency regularization Frequency domain Medical image segmentation Semi-supervision

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Movable Antenna-Assisted Integrated Sensing and Communication Systems

引用

IEEE Transactions on Wireless Communications 2025年

作者： Jiang, Chengjun Zhang, Chensi Huang, Chongwen Ge, Jianhua Niyato, Dusit Yuen, Chau Xidian University State Key Lab. of Integrated Service Networks Xi’an China Zhejiang University College of Information Science and Electronic Engineering China Xidian University State Key Laboratory of Integrated Service Networks China Zhejiang Provincial Key Laboratory of Info. Proc China Nanyang Technological University College of Computing and Data Science Singapore Nanyang Technological University School of Electrical and Electronics Engineering Singapore

Movable antennas (MAs) enhance flexibility in beamforming gain and interference suppression by adjusting position within certain areas of the transceivers. In this paper, we propose an MA-assisted integrated sensing and communication framework, wherein MAs are deployed for reconfiguring the channel array responses at both the receiver and transmitter of a base station. Then, we develop an optimization framework aimed at maximizing the sensing signal-to-interference-plus-noise-ratio (SINR) by jointly optimizing the receive beamforming vector, the transmit beamforming matrix, and the positions of MAs while meeting the minimum SINR requirement for each user. To address this nonconvex problem involving complex coupled variables, we devise an alternating optimization-based algorithm that incorporates techniques including the Charnes-Cooper transform, second-order Taylor expansion, and successive convex approximation (SCA). Specifically, the closed form of the received vector and the optimal transmit matrix can be first obtained in each iteration. Subsequently, the solutions for the positions of the transmit and receive MAs are obtained using the SCA method based on the second-order Taylor expansion. The simulation results show that the proposed scheme has significant advantages over the other baseline schemes. In particular, the proposed scheme has the ability to match the performance of the fixed position antenna scheme while utilizing fewer resources. © 2002-2012 IEEE.

关键词： Signal to noise ratio

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Broadband Optical Coupler based on the Helical Long-Period Gratings Inscribed in Seven-Core Fibers

引用

Journal of Lightwave Technology 2025年

作者： Chen, Siyu Jiang, Chen Ma, Yuehui Zhao, Yunhe Fan, Xiaolong Mou, Chengbo Liu, Yunqi Shanghai University Key Laboratory of Specialty Fiber Optics and Optical Access Networks Shanghai Institute for Advanced Communication and Data Science School of Communication and Information Engineering Shanghai 200444 China Advanced Photonic Technology Lab Nanjing210023 China Shanghai Maritime University Institute of Logistics Science and Engineering Shanghai201306 China

We propose a broadband optical coupler based on cladding mode coupling of identical helical long-period gratings (HLPGs) inscribed in different cores of seven-core fibers (SCFs). The influence of the surrounding refractive index and offset distance between the input grating and tapping grating on the coupling efficiency of the coupler was investigated numerically and experimentally. A total peak coupling efficiency of 75.7% was achieved experimentally under the conditions of a surrounding refractive index of 1.454 and an offset distance of 90 mm when the light is launched into the center core of the SCF. The proposed optical coupler could have promising applications in multi-core fiber amplifiers and space-division multiplexing optical communications. © 1983-2012 IEEE.

关键词： Space division multiple access

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Rethinking attention mechanism for enhanced pedestrian attribute recognition

引用

Neurocomputing 2025年 639卷

作者： Wu, Junyi Huang, Yan Gao, Min Niu, Yuzhen Chen, Yuzhong Wu, Qiang Fujian Key Laboratory of Network Computing and Intelligent Information Processing College of Computer and Data Science Fuzhou University Fujian Fuzhou350108 China Engineering Research Center of BigData Intelligence Ministry of Education Fujian Fuzhou350108 China Australian Artificial Intelligence Institute University of Technology Sydney SydneyNSW2007 Australia Fujian Key Lab for Intelligent Processing and Wireless Transmission of Media Information College of Physics and Information Engineering Fuzhou University Fujian Fuzhou350108 China School of Electrical and Data Engineering University of Technology Sydney SydneyNSW2007 Australia

Pedestrian Attribute Recognition (PAR) plays a crucial role in various computer vision applications, demanding precise and reliable identification of attributes from pedestrian images. Traditional PAR methods, though effective in leveraging attention mechanisms, often suffer from the lack of direct supervision on attention, leading to potential overfitting and misallocation. This paper introduces a novel and model-agnostic approach, Attention-Aware Regularization (AAR), which rethinks the attention mechanism by integrating causal reasoning to provide direct supervision of attention maps. AAR employs perturbation techniques and a unique optimization objective to assess and refine attention quality, encouraging the model to prioritize attribute-specific regions. Our method demonstrates significant improvement in PAR performance by mitigating the effects of incorrect attention and fostering a more effective attention mechanism. Experiments on standard datasets showcase the superiority of our approach over existing methods, setting a new benchmark for attention-driven PAR models. © 2025 The Authors

关键词： Perturbation techniques

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