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arXiv 2021年

作者： Xue, Cheng Zhu, Lei Fu, Huazhu Hu, Xiaowei Li, Xiaomeng Zhang, Hai Heng, Pheng-Ann Department of Computer Science and Engineering Chinese University of Hong Kong Hong Kong Department of Applied Mathematics and Theoretical Physics University of Cambridge Inception Institute of Artificial Intelligence Abu Dhabi United Arab Emirates Department of Electronic and Computer Engineering Hong Kong University of Science and Technology Hong Kong Shenzhen People's Hospital Second Clinical College of Jinan University First Affiliated Hospital of Southern University of Science and Technology Shenzhen Key Laboratory of Virtual Reality and Human Interaction Technology Shenzhen Institutes of Advanced Technology Chinese Academy of Sciences China

Automatic breast lesion segmentation in ultrasound helps to diagnose breast cancer, which is one of the dreadful diseases that affect women globally. Segmenting breast regions accurately from ultrasound image is a challenging task due to the inherent speckle artifacts, blurry breast lesion boundaries, and inhomogeneous intensity distributions inside the breast lesion regions. Recently, convolutional neural networks (CNNs) have demonstrated remarkable results in medical image segmentation tasks. However, the convolutional operations in a CNN often focus on local regions, which suffer from limited capabilities in capturing long-range dependencies of the input ultrasound image, resulting in degraded breast lesion segmentation accuracy. In this paper, we develop a deep convolutional neural network equipped with a global guidance block (GGB) and breast lesion boundary detection (BD) modules for boosting the breast ultrasound lesion segmentation. The GGB utilizes the multi-layer integrated feature map as a guidance information to learn the long-range non-local dependencies from both spatial and channel domains. The BD modules learn additional breast lesion boundary map to enhance the boundary quality of a segmentation result refinement. Experimental results on a public dataset and a collected dataset show that our network outperforms other medical image segmentation methods and the recent semantic segmentation methods on breast ultrasound lesion segmentation. Moreover, we also show the application of our network on the ultrasound prostate segmentation, in which our method better identifies prostate regions than state-of-the-art networks. © 2021, CC BY.

关键词： Deep neural networks

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Dual-Teacher: Integrating Intra-domain and Inter-domain Teachers for Annotation-efficient Cardiac Segmentation

arXiv

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arXiv 2020年

作者： Li, Kang Wang, Shujun Yu, Lequan Heng, Pheng-Ann Dept. of Computer Science and Engineering Chinese University of Hong Kong Hong Kong Dept. of Radiation Oncology Stanford University Guangdong Provincial Key Laboratory of Computer Vision and Virtual Reality Technology Shenzhen Institutes of Advanced Technology Chinese Academy of Sciences Shenzhen China

Medical image annotations are prohibitively time-consuming and expensive to obtain. To alleviate annotation scarcity, many approaches have been developed to efficiently utilize extra information, e.g., semi-supervised learning further exploring plentiful unlabeled data, domain adaptation including multi-modality learning and unsupervised domain adaptation resorting to the prior knowledge from additional modality. In this paper, we aim to investigate the feasibility of simultaneously leveraging abundant unlabeled data and well-established cross-modality data for annotation-efficient medical image segmentation. To this end, we propose a novel semi-supervised domain adaptation approach, namely Dual-Teacher, where the student model not only learns from labeled target data (e.g., CT), but also explores unlabeled target data and labeled source data (e.g., MR) by two teacher models. Specifically, the student model learns the knowledge of unlabeled target data from intra-domain teacher by encouraging prediction consistency, as well as the shape priors embedded in labeled source data from inter-domain teacher via knowledge distillation. Consequently, the student model can effectively exploit the information from all three data resources and comprehensively integrate them to achieve improved performance. We conduct extensive experiments on MM-WHS 2017 dataset and demonstrate that our approach is able to concurrently utilize unlabeled data and cross-modality data with superior performance, outperforming semi-supervised learning and domain adaptation methods with a large margin. Copyright © 2020, The Authors. All rights reserved.

关键词： Large dataset

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Automatic image annotation with real-world community contributed data set

Automatic image annotation with real-world community contrib...

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作者： Tian, Feng Shen, Xukun Shang, Fuhua School of Computer and Information Technology Northeast Petroleum University DaQing163318 China School of Computing National University of Singapore Singapore119077 Singapore State Key Laboratory of Virtual Reality Technology and Systems BeiHang University Beijing100191 China

With the massive explosion of social multimedia community, social images have become very popular in our daily life. The image-associated labels are a valuable resource for automatic image annotation, but they tend to be unreliable. In this paper, we exploit the problem of image annotation from real-world community contributed images and their associated incorrect, insufficient, and personalized labels. We present SNTag, a novel semantic neighborhood learning method, on which image annotation task can be efficiently carried out in real-world scenario. First, we propose to use image-associated labels as the supervising information to guide the replenishment of training images, which enable the labels for training image not only more sufficient, but also more correct. Then, the "semantic balanced neighborhood" for image is generated, thus enabling the presence of more rare labels in image label list. Furthermore, we generate "semantic consistent neighborhood" within corresponding "semantic balanced neighborhood". The retrieved neighbor images are not only visually alike but also semantically related. Contrary to earlier work, these neighbors are retrieved from the same subspace by the integration of metric learning embedded in multiple labels and sparse reconstruction. Based on the neighbor set, we propose a novel algorithm to assign the optimal labels to the image, which is more robust to noise. We conduct extensive experiments on several standard real-world benchmark data sets downloaded from community websites. The experimental results demonstrate that it outperforms the current state-of-the-art methods. © 2017, Springer-Verlag Berlin Heidelberg.

关键词： Image annotation

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A Multi-Task Mean Teacher for Semi-Supervised Shadow Detection

A Multi-Task Mean Teacher for Semi-Supervised Shadow Detecti...

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Conference on computer Vision and Pattern Recognition (CVPR)

作者： Zhihao Chen Lei Zhu Liang Wan Song Wang Wei Feng Pheng-Ann Heng College of Intelligence and Computing Tianjin University Department of Computer Science and Engineering The Chinese University of Hong Kong Department of Computer Science and Engineering University of South Carolina Shenzhen Key Laboratory of Virtual Reality and Human Interaction Technology Shenzhen Institutes of Advanced Technology Chinese Academy of Sciences China

ISBN: (数字)9781728171685

ISBN: (纸本)9781728171692

Existing shadow detection methods suffer from an intrinsic limitation in relying on limited labeled datasets, and they may produce poor results in some complicated situations. To boost the shadow detection performance, this paper presents a multi-task mean teacher model for semi-supervised shadow detection by leveraging unlabeled data and exploring the learning of multiple information of shadows simultaneously. To be specific, we first build a multi-task baseline model to simultaneously detect shadow regions, shadow edges, and shadow count by leveraging their complementary information and assign this baseline model to the student and teacher network. After that, we encourage the predictions of the three tasks from the student and teacher networks to be consistent for computing a consistency loss on unlabeled data, which is then added to the supervised loss on the labeled data from the predictions of the multi-task baseline model. Experimental results on three widely-used benchmark datasets show that our method consistently outperforms all the compared state-of- the-art methods, which verifies that the proposed network can effectively leverage additional unlabeled data to boost the shadow detection performance.

关键词： Task analysis Image edge detection Feature extraction Training Radio frequency Fuses Solid modeling

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A survey on incorporating domain knowledge into deep learning for medical image analysis

arXiv

引用

arXiv 2020年

作者： Xie, Xiaozheng Niu, Jianwei Liu, Xuefeng Chen, Zhengsu Tang, Shaojie Yu, Shui The State Key Laboratory of Virtual Reality Technology and Systems School of Computer Science and Engineering Beihang University Beijing100191 China Hangzhou Innovation Institute of Beihang University China Jindal School of Management The University of Texas Dallas United States School of Computer Science University of Technology Sydney Australia

Although deep learning models like CNNs have achieved great success in medical image analysis, the small size of medical datasets remains a major bottleneck in this area. To address this problem, researchers have started looking for external information beyond current available medical datasets. Traditional approaches generally leverage the information from natural images via transfer learning. More recent works utilize the domain knowledge from medical doctors, to create networks that resemble how medical doctors are trained, mimic their diagnostic patterns, or focus on the features or areas they pay particular attention to. In this survey, we summarize the current progress on integrating medical domain knowledge into deep learning models for various tasks, such as disease diagnosis, lesion, organ and abnormality detection, lesion and organ segmentation. For each task, we systematically categorize different kinds of medical domain knowledge that have been utilized and their corresponding integrating methods. We also provide current challenges and directions for future research. Copyright © 2020, The Authors. All rights reserved.

关键词： Deep neural networks

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Attention Based Hierarchical Aggregation Network for 3D Left Atrial Segmentation 9th

Attention Based Hierarchical Aggregation Network for 3D Left...

引用

9th International Workshop on Statistical Atlases and Computational Models of the Heart: Atrial Segmentation and LV Quantification Challenges, STACOM 2018, held in conjunction with Medical Image Computing and computer-Assisted Intervention, MICCAI 2018

作者： Li, Caizi Tong, Qianqian Liao, Xiangyun Si, Weixin Sun, Yinzi Wang, Qiong Heng, Pheng-Ann School of Computer Science Wuhan University Wuhan430072 China Shenzhen Key Laboratory of Virtual Reality and Human Interaction Technology Shenzhen Institutes of Advanced Technology Chinese Academy of Sciences Shenzhen518000 China Department of Computer Science and Engineering The Chinese University of Hong Kong Hong Kong China

ISBN: (纸本)9783030120283

Atrial fibrillation (AF) is the most common type of cardiac arrhythmia. The atrial segmentation is essential for the understanding of the human atria structure which is vital to the AF treatment. In this paper, we propose a novel three-dimensional (3D) segmentation network combining hierarchical aggregation and attention mechanism for 3D left atrial segmentation, named attention based hierarchical aggregation network (HAANet). In our network, the shallow and deep feature fusion capability of encoder-decoder convolutional neural networks is enhanced through hierarchical aggregation. Besides, attention mechanism is adopted to promote the ability of extracting efficient features. Experimental results demonstrate the HAANet can produce good results for 3D left atrial segmentation and the dice score of our HAANet reaches 92.30. © 2019, Springer Nature Switzerland AG.

关键词： Diseases

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A Robot Pick and Place Skill Learning Method Based on Maximum Entropy and DDQN Algorithm

引用

Journal of Physics: Conference Series 2022年第1期2203卷

作者： Peiliang Wu Yan Zhang Yao Li Bingyi Mao Wenbai Chen Guowei Gao School of Information Science and Engineering Yanshan University Qinhuangdao Hebei 066004 China The Key Laboratory for Computer Virtual Technology and System Integration of Hebei Province Qinhuangdao Hebei 066004 China School of Automation Beijing Information Science & Technology University Beijing 100192 China

Pick and place (PAP) skill learning is a fundamental ability of intelligent robots, such as home service robot. Due to the NP-hard nature of the PAP problem, it takes a long time for an intelligent robot to learn the PAP skill based on current methods. In order to improve the learning efficiency of robot PAP skills, this paper proposes a Soft-DDQN-based PAP skill learning method. Firstly, the Soft-DDQN is proposed by introducing maximum entropy into robot DDQN framework, and the learning goal of Soft-DDQN is to maximize reward and information entropy. Secondly, PAP problem is modelled as a discrete form and Soft-DDQN is applied to solve the PAP problem. Finally, in order to verify the efficiency of Soft-DDQN-based PAP skill learning, comparisons have been given from two standard perspectives and shown that Soft-DDQN improves efficiency of PAP skill learning evidently.

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Shape-aware Meta-learning for Generalizing Prostate MRI Segmentation to Unseen Domains

arXiv

引用

arXiv 2020年

作者： Liu, Quande Dou, Qi Heng, Pheng Ann Department of Computer Science and Engineering Chinese University of Hong Kong Hong Kong T Stone Robotics Institute Chinese University of Hong Kong Hong Kong Guangdong Provincial Key Laboratory of Computer Vision and Virtual Reality Technology Shenzhen Institutes of Advanced Technology Chinese Academy of Sciences Shenzhen China

Model generalization capacity at domain shift (e.g., various imaging protocols and scanners) is crucial for deep learning methods in real-world clinical deployment. This paper tackles the challenging problem of domain generalization, i.e., learning a model from multi-domain source data such that it can directly generalize to an unseen target domain. We present a novel shape-aware meta-learning scheme to improve the model generalization in prostate MRI segmentation. Our learning scheme roots in the gradient-based meta-learning, by explicitly simulating domain shift with virtual meta-train and meta-test during training. Importantly, considering the deficiencies encountered when applying a segmentation model to unseen domains (i.e., incomplete shape and ambiguous boundary of the prediction masks), we further introduce two complementary loss objectives to enhance the meta-optimization, by particularly encouraging the shape compactness and shape smoothness of the segmentations under simulated domain shift. We evaluate our method on prostate MRI data from six different institutions with distribution shifts acquired from public datasets. Experimental results show that our approach outperforms many state-of-the-art generalization methods consistently across all six settings of unseen domains4 Copyright © 2020, The Authors. All rights reserved.

关键词： Urology

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Laplacian-based 3D mesh simplification with feature preservation

引用

International Journal of Modeling, Simulation, and Scientific Computing 2019年第2期10卷 64-82页

作者： Wei Lyu Wei Wu Lin Zhang Zhaohui Wu Zhong Zhou State Key Laboratory of Virtual Reality Technology and Systems School of Computer Science and Engineering Beihang University Beijing 100191 P.R.China Generic Technology Center Systems Engineering Research Institute Beijing 100036 P.R.China Transportation Basic Research and Applied Innovation Center China Academy of Transportation Sciences Beijing 100029 P.R.China

We propose a novel Laplacian-based algorithm that simplifies triangle surface meshes and can provide different preservation ratios of geometric *** efficient and fast algorithm uses a 3D mesh model as input and initially detects geometric features by using a Laplacian-based shape descriptor(L-descriptor).The algorithm further performs an optimized clustering approach that combines a Laplacian operator with K-means clustering algorithm to perform vertex ***,we introduce a Laplacian weighted cost function based on L-descriptor to perform feature weighting and error statistics comparison,which are further used to change the deletion order of the model elements and preserve the saliency *** algorithm can provide different preservation ratios of geometric features and may be extended to handle arbitrary mesh *** experiments on a variety of 3D surface meshes demonstrate the advantages of our algorithm in terms of improving accuracy and applicability,and preserving saliency geometric features.

关键词： Mesh simplification L-descriptor feature weighting feature metric feature preservation

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Assessing performance of augmented reality-based neurosurgical training

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Visual Computing for Industry,Biomedicine,and Art 2019年第1期2卷 45-54页

作者： Wei-Xin Si Xiang-Yun Liao Yin-Ling Qian Hai-Tao Sun Xiang-Dong Chen Qiong Wang Pheng Ann Heng Guangdong Provincial Key Laboratory of Computer Vision and Virtual Reality Technology Shenzhen Institutes of Advanced TechnologyChinese Academy of Sciences1068 Xueyuan AvenueShenzhen University TownShenzhen 518055China Department of Neurosurgery Zhujiang HospitalSouthern Medical UniversityGuangzhou 510282China E.N.T.department of Shenzhen University General Hospital Shenzhen 518055China Department of Computer Science and Engineering the Chinese University of Hong KongHong KongChina

This paper presents a novel augmented reality(AR)-based neurosurgical training simulator which provides a very natural way for surgeons to learn neurosurgical *** simulation with bimanual haptic interaction is integrated in this work to provide a simulated environment for users to achieve holographic guidance for pre-operative *** achieve the AR guidance,the simulator should precisely overlay the 3D anatomical information of the hidden target organs in the patients in real *** this regard,the patient-specific anatomy structures are reconstructed from segmented brain magnetic resonance *** propose a registration method for precise mapping of the virtual and real *** addition,the simulator provides bimanual haptic interaction in a holographic environment to mimic real brain tumor *** this study,we conduct AR-based guidance validation and a user study on the developed simulator,which demonstrate the high accuracy of our AR-based neurosurgery simulator,as well as the AR guidance mode’s potential to improve neurosurgery by simplifying the operation,reducing the difficulty of the operation,shortening the operation time,and increasing the precision of the operation.

关键词： Augmented reality Personalized virtual operative anatomy Neurosurgical training

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