检索结果-内蒙古大学图书馆

Artificial bee colony algorithm for the protein structure prediction based on the toy model

Fundamenta Informaticae 2015年第3期136卷 241-252页

作者： Li, Yanzhang Zhou, Changjun Zheng, Xuedong Key Laboratory of Advanced Design and Intelligent Computing Ministry of Education Dalian University No.10 Xuefu Street Jinzhou New District Dalian Liaoning Province China

The protein structure folding is one of the most challenging problems in the field of bioinformatics. The main problem of protein structure prediction in the 3D toy model is to find the lowest energy conformation. Although many heuristic algorithms have been proposed to solve the protein structure prediction (PSP) problem, the existing algorithms are far from perfect since PSP is an NP-problem. In this paper, we proposed an artificial bee colony (ABC) algorithm based on the toy model to solve PSP problem. In order to improve the global convergence ability and convergence speed of the ABC algorithm, we adopt a new search strategy by combining the global solution into the search equation. Experimental results illustrate that the suggested algorithm can get the lowest energy when the algorithm is applied to the Fibonacci sequences and to four real protein sequences which come from the Protein Data Bank (PDB). Compared with the results obtained by PSO, LPSO, PSO-TS, PGATS, our algorithm is more efficient.

关键词： Heuristic algorithms

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Calculations of the Acceleration of Centrifugal Loading on Adherent Cells

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IOP Conference Series: Materials Science and Engineering 2017年第1期224卷

作者： Kang Chen Yang Song Qing Liu Chunqiu Zhang Tianjin Key Laboratory of the Design Intelligent Control of the Advanced Mechatronical System School of Mechanical Engineering Tianjin University of Technology Tianjin 300384 China

Studies have shown that the morphology and function of living cells are greatly affected by the state of different high acceleration. Based on the centrifuge, we designed a centrifugal cell loading machine for the mechanical biology of cells under high acceleration loading. For the machine, the feasibility of the experiment was studied by means of constant acceleration or variable acceleration loading in the Petri dish fixture and/or culture flask. Here we analyzed the distribution of the acceleration of the cells with the change of position and size of the culturing device quantitatively. It is obtained that Petri dish fixture and/or culture flask can be used for constant acceleration loading by experiments; the centripetal acceleration of the adherent cells increases with the increase of the distance between the rotor center of the centrifuge and the fixture of the Petri dish and the size of the fixture. It achieves the idea that the general biology laboratory can conduct the study of mechanical biology at high acceleration. It also provides a basis for more accurate study of the law of high acceleration on mechanobiology of cells.

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Comparative Study of Two 2-RPU+SPR Parallel Manipulators

Comparative Study of Two 2-RPU+SPR Parallel Manipulators

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World Congress on intelligent Control and Automation

作者： Qiang Yan Bin Li Yangmin Li Xinhua Zhao Tianjin Key Laboratory for Advanced Mechatronic System Design and Intelligent Control School of Mechanical Engineering Tianjin University of Technology Tianjin 300191 China

ISBN: (纸本)9781467384155

A comparative study of two over-constrained 2-RPU+SPR parallel manipulators (PM) is studied in terms of workspace and transmission performance in this paper. The two 2-RPU+SPR PMs have identical kinematics limbs, but some differences exist in terms of the joints distribution. The kinematics, the workspace and the transmission performance are studied and simulation examples are presented to demonstrate the differences between the two PMs. This study provides insights into the two parallel manipulators with identical limbs but with different joints distribution.

关键词： Decision support systems TV intelligent control Automation Senior members

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A local-optimization refinement algorithm in single particle analysis for macromolecular complex with multiple rigid modules

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Protein & Cell 2016年第1期7卷 46-62页

作者： Hong Shan Zihao wang Fa Zhang Yong Xiong Chang-Cheng Yin Fei Sun Department of Biophysics College of Basic Medical Sciences Peking University Health Science Center Beijing 100191China National Laboratory of Biomacromolecules Institute of Biophysics Chinese Academy of Sciences Beijing 100101 China Key Lab of Intelligent Information Processing and Advanced Computing Research Lab Institute of Computing TechnologyChinese Academy of Sciences Beijing 100190 China University of Chinese Academy of Sciences Beijing 100049 China Department of Molecular Biophysics and Biochemistry Yale University New Haven CT 06511 USA Center for Biological Imaging Institute of Biophysics Chinese Academy of Sciences Beijing 100101 China

Single particle analysis, which can be regarded as an average of signals from thousands or even millions of particle projections, is an efficient method to study the three-dimensional structures of biological macro- molecules. An intrinsic assumption in single particle analysis is that all the analyzed particles must have identical composition and conformation. Thus specimen heterogeneity in either composition or conformation has raised great challenges for high-resolution analysis. For particles with multiple conformations, inaccurate align- ments and orientation parameters will yield an averaged map with diminished resolution and smeared density. Besides extensive classification approaches, here based on the assumption that the macromolecular complex is made up of multiple rigid modules whose relative orien- tations and positions are in slight fluctuation around equilibriums, we propose a new method called as local optimization refinement to address this conformational heterogeneity for an improved resolution. The key idea is to optimize the orientation and shift parameters of each rigid module and then reconstruct their three-dimen- sional structures individually. Using simulated data of 80S/70S ribosomes with relative fluctuations between the large （60S/50S） and the small （40S/30S） subunits, we tested this algorithm and found that the resolutions of both subunits are significantly improved. Our method provides a proof-of-principle solution for high-resolutionsingle particle analysis of macromolecular complexes with dynamic conformations.

关键词： cryo-electron microscopy single particleanalysis conformational heterogeneity rigid module Iocaoptimization refinement

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3D Ear Shape Matching Using Joint -Entropy

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Journal of Computer Science & Technology 2015年第3期30卷 565-577页

作者：孙晓鹏李思慧韩枫魏小鹏 Institute of Computer Systems School of Computer and Information Technology Liaoning Normal University Dalian 116029 China Beijing Key Laboratory of Intelligent Telecommunications Software and Multimedia Beijing University of Posts and Telecommunications Beijing 100876 China School of Mechanical and Engineering Dalian University of Technology Dalian 116024 China Key Laboratory of Advanced Design and Intelligent Computing Dalian University Dalian 116622 China

In this article, we investigate the use of joint a-entropy for 3D ear matching by incorporating the local shape feature of 3D ears into the joint a-entropy. First, we extract a sut^cient number of key points from the 3D ear point cloud, and fit the neighborhood of each key point to a single-value quadric surface on product parameter regions. Second, we define the local shape feature vector of each key point as the sampling depth set on the parametric node of the quadric surface. Third, for every pair of gallery ear and probe ear, we construct the minimum spanning tree （MST） on their matched key points. Finally, we minimize the total edge weight of MST to estimate its joint a-entropy the smaller the entropy is, the more similar the ear pair is. We present several examples to demonstrate the advantages of our algorithm, including low time complexity, high recognition rate, and high robustness. To the best of our knowledge, it is the first time that, in computer graphics, the classical information theory of joint a-entropy is used to deal with 3D ear shape recognition.

关键词： joint a-entropy minimum spanning tree local shape feature ear matching ear recognition

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The Frame Structure design of three Lifting Point Dummy ROV

The Frame Structure Design of three Lifting Point Dummy ROV

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2016 3rd International Conference on Materials Engineering,Manufacturing Technology and Control(ICMEMTC 2016)

作者： Xingwei Guo Jie Song Zhenzhong Liu Offshore Oil Engineering Co. Ltd. Tianjin Key Laboratory of the Design and Intelligent Control of the Advanced Mechatronical System Tianjin University of Technology

Research the depth of 3000 m Work-Class ROV as mock object and develop a ROV for land test. This device is set three lifting point in the top. The rope connecting the front two lifting point is fixed, the rope connecting the rear lifting point change the length by motor. All of those lifting point are in order to achieve the function of forerake and hypsokinesis. The Dummy ROV can displace the real ROV to simulate the land construction, improve the efficiency of ocean construction and reduce the cost of experiment.

关键词： Lifting point dummy ROV frame structure

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The design of dummy ROV electric-drive seven functions manipulator

The design of dummy ROV electric-drive seven functions manip...

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2016 3rd International Conference on Materials Engineering,Manufacturing Technology and Control(ICMEMTC 2016)

作者： Zaiyu Chen Meina Guo Zhenzhong Liu Lianyu Zhao Offshore Oil Engineering Co. Ltd. Tianjin Key Laboratory of the Design and Intelligent Control of the Advanced Mechatronical System Tianjin University of Technology

With the deepening of the Marine development, underwater constructing often need to use the ROV. In order to verify the construction scheme, ensuring construction efficiency, the staff will use ROV or Dummy ROV on land to simulate construction. As the main body of the ROV, the manipulator is the execution part of the system. It is the core of the whole system;all of the drive and control are around it. It references the mature underwater manipulator, and draw lessons from the domestic manipulator design experience. The design adopts electric drive, and the joints torque were calculated and simulated by the Solid Works motion analysis software.

关键词： Dummy ROV seven functions manipulator manipulator design

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Detect the emotions of the public based on cascade neural network model

Detect the emotions of the public based on cascade neural ne...

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International Conference on Computer and Information Science (ACIS)

作者： Xiao Sun Xiaoqi Peng Fuji Ren Anhui Province Key Laboratory of Affective Computing and Advanced Intelligent Machine Hefei University of Technology Hefei China Faculty of Engineering University of Tokushima Tokushima Japan

ISBN: (纸本)9781509008070

Along with the development of social network, more and more people know the world by reading news. The problem about what kind of emotion is inspired when people read news is very worthy of discussion. This paper will mix Deep Belief Networks (DBN) model and Support Vector Machine (SVM) to a hybrid neural network model by using the Contrast Divergence (CD) algorithm to estimate the weights when training a generating model, ensure that each layer of the Restricted Boltzmann Machine (RBM) mapping the features of the inputs to the best. At the same time, we cascade the last layer of DBN and a SVM classifier to adjust judging performance. And a set of tags will be attached to the top (Associative Memory), through a process of parameter tuning, learn the identifying weights to obtain a network for the task of text classification. The experimental results show that the hybrid neural network model works better than the traditional text categorization method based on simple characteristics (such as CHI), and it is more suitable for extracting text semantic characteristics.

关键词： Visualization Training Support vector machines Classification algorithms Text categorization Artificial neural networks

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GA based optimal design for megawatt-class wind turbine gear train 8th

GA based optimal design for megawatt-class wind turbine gear...

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8th International Conference on Image and Graphics, ICIG 2015

作者： Zhang, Jianxin Zhang, Zhange Key Lab of Advanced Design and Intelligent Computing Ministry of Education Dalian University Dalian China

ISBN: (纸本)9783319219622

In this paper, we propose a novel megawatt-class wind turbine gear train optimal design method based on genetic algorithm. Firstly, we construct an objective function to obtain the optimal quality of gear train with the constrain conditions of ratio, adjacency, assemble, gear bending fatigue and gear surface contact fatigue limitations. Then, genetic algorithm is applied to achieve the optimal parameter of the objective function. Finally, the finite element analysis method is taken to verify the feasibility of the optimization results. One type of wind turbine gearbox is given as the detail example to verify the effective of proposed method, and the verification results show that the presented method can achieve good effect for wind turbine gearbox. © Springer International Publishing Switzerland 2015.

关键词： Wind turbines

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Efficient Wall-Corner Collision Avoidance using D-Images

Efficient Wall-Corner Collision Avoidance using D-Images

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IEEE International Conference on Mechatronics and Automation

作者： Guohe Fu Xinyu Zhang Shanghai Key Laboratory of Trustworthy Computing MoE Engineering Research Center for Software/Hardware Co-design Intelligent Robot Motion & Vision Laboratory East China Normal University Shanghai China

ISBN: (纸本)9781509023974

When an autonomous mobile robot exploring in an unstructured environment, it may often enter a wall-corner, but be stuck there. We present a wall-corner collision detection and avoidance algorithm using depth images. We first determine if a mobile robot is trapped in a wall-corner using historic alternate turnings. Then we propose a geometric approach to let the robot escape a corner. We demonstrate the efficiency of our algorithm using simulations and experimental tests. Using our algorithm, a robot can quickly detect and escape wall-corners. Moreover, we extend our algorithm to handle a very challenging scenario, Z-shaped Zigzag paths.

关键词： wall-corner collision detection avoidance algorithm mobile robot

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